Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MUC4Q99102 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MUC4Q99102 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MUC4Q99102 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MUC4Q99102 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MUC4Q99102 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.68■□□□□ 0.58
MUC4Q99102 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.68■□□□□ 0.58
MUC4Q99102 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MUC4Q99102 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MUC4Q99102 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MUC4Q99102 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.67■□□□□ 0.58
MUC4Q99102 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MUC4Q99102 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.67■□□□□ 0.58
MUC4Q99102 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MUC4Q99102 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MUC4Q99102 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MUC4Q99102 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MUC4Q99102 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MUC4Q99102 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MUC4Q99102 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MUC4Q99102 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MUC4Q99102 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MUC4Q99102 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MUC4Q99102 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MUC4Q99102 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MUC4Q99102 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
MUC4Q99102 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
MUC4Q99102 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MUC4Q99102 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MUC4Q99102 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MUC4Q99102 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MUC4Q99102 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.64■□□□□ 0.57
MUC4Q99102 LINC01003-201ENST00000564834 1764 ntBASIC18.63■□□□□ 0.57
MUC4Q99102 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
MUC4Q99102 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MUC4Q99102 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.63■□□□□ 0.57
MUC4Q99102 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MUC4Q99102 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MUC4Q99102 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MUC4Q99102 BX255925.1-201ENST00000566954 1854 ntBASIC18.62■□□□□ 0.57
MUC4Q99102 AP004833.2-201ENST00000532228 1454 ntBASIC18.62■□□□□ 0.57
MUC4Q99102 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MUC4Q99102 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MUC4Q99102 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MUC4Q99102 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.61■□□□□ 0.57
MUC4Q99102 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MUC4Q99102 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.6■□□□□ 0.57
MUC4Q99102 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MUC4Q99102 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MUC4Q99102 AC100797.4-201ENST00000631653 1827 ntBASIC18.6■□□□□ 0.57
MUC4Q99102 AC127502.1-201ENST00000399971 1502 ntBASIC18.59■□□□□ 0.57
MUC4Q99102 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.59■□□□□ 0.57
MUC4Q99102 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.59■□□□□ 0.57
MUC4Q99102 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MUC4Q99102 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MUC4Q99102 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MUC4Q99102 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MUC4Q99102 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.58■□□□□ 0.57
MUC4Q99102 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.58■□□□□ 0.57
MUC4Q99102 DUX4L28-201ENST00000623687 678 ntBASIC18.58■□□□□ 0.57
MUC4Q99102 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MUC4Q99102 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MUC4Q99102 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.58■□□□□ 0.56
MUC4Q99102 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
MUC4Q99102 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MUC4Q99102 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MUC4Q99102 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.57■□□□□ 0.56
MUC4Q99102 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MUC4Q99102 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
MUC4Q99102 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MUC4Q99102 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
MUC4Q99102 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.57■□□□□ 0.56
MUC4Q99102 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.57■□□□□ 0.56
MUC4Q99102 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MUC4Q99102 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.56■□□□□ 0.56
MUC4Q99102 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MUC4Q99102 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MUC4Q99102 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.56■□□□□ 0.56
MUC4Q99102 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MUC4Q99102 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MUC4Q99102 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MUC4Q99102 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MUC4Q99102 MIR3665-201ENST00000578708 105 ntBASIC18.55■□□□□ 0.56
MUC4Q99102 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
MUC4Q99102 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MUC4Q99102 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.55■□□□□ 0.56
MUC4Q99102 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MUC4Q99102 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MUC4Q99102 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.54■□□□□ 0.56
MUC4Q99102 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MUC4Q99102 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MUC4Q99102 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MUC4Q99102 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MUC4Q99102 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MUC4Q99102 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.52■□□□□ 0.56
MUC4Q99102 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MUC4Q99102 AP006261.1-201ENST00000584783 668 ntBASIC18.52■□□□□ 0.56
MUC4Q99102 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.52■□□□□ 0.56
MUC4Q99102 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MUC4Q99102 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms