Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
PRICKLE1Q96MT3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRICKLE1Q96MT3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
PRICKLE1Q96MT3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRICKLE1Q96MT3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.6■■□□□ 1.85
PRICKLE1Q96MT3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.6■■□□□ 1.85
PRICKLE1Q96MT3 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.6■■□□□ 1.85
PRICKLE1Q96MT3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PRICKLE1Q96MT3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRICKLE1Q96MT3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PRICKLE1Q96MT3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.59■■□□□ 1.85
PRICKLE1Q96MT3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.59■■□□□ 1.85
PRICKLE1Q96MT3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.59■■□□□ 1.85
PRICKLE1Q96MT3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.59■■□□□ 1.85
PRICKLE1Q96MT3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRICKLE1Q96MT3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRICKLE1Q96MT3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRICKLE1Q96MT3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PRICKLE1Q96MT3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
PRICKLE1Q96MT3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PRICKLE1Q96MT3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PRICKLE1Q96MT3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PRICKLE1Q96MT3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
PRICKLE1Q96MT3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRICKLE1Q96MT3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
PRICKLE1Q96MT3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PRICKLE1Q96MT3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRICKLE1Q96MT3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRICKLE1Q96MT3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.55■■□□□ 1.84
PRICKLE1Q96MT3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
PRICKLE1Q96MT3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.52■■□□□ 1.84
PRICKLE1Q96MT3 MIR639-201ENST00000384974 98 ntBASIC26.52■■□□□ 1.84
PRICKLE1Q96MT3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PRICKLE1Q96MT3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PRICKLE1Q96MT3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.49■■□□□ 1.83
PRICKLE1Q96MT3 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.49■■□□□ 1.83
PRICKLE1Q96MT3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PRICKLE1Q96MT3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PRICKLE1Q96MT3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PRICKLE1Q96MT3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.48■■□□□ 1.83
PRICKLE1Q96MT3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
PRICKLE1Q96MT3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PRICKLE1Q96MT3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PRICKLE1Q96MT3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PRICKLE1Q96MT3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
PRICKLE1Q96MT3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.47■■□□□ 1.83
PRICKLE1Q96MT3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PRICKLE1Q96MT3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PRICKLE1Q96MT3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PRICKLE1Q96MT3 AL139393.2-201ENST00000608721 2025 ntBASIC26.46■■□□□ 1.83
PRICKLE1Q96MT3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PRICKLE1Q96MT3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PRICKLE1Q96MT3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.46■■□□□ 1.83
PRICKLE1Q96MT3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PRICKLE1Q96MT3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PRICKLE1Q96MT3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PRICKLE1Q96MT3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRICKLE1Q96MT3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRICKLE1Q96MT3 AP004833.2-201ENST00000532228 1454 ntBASIC26.42■■□□□ 1.82
PRICKLE1Q96MT3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PRICKLE1Q96MT3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.42■■□□□ 1.82
PRICKLE1Q96MT3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PRICKLE1Q96MT3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.42■■□□□ 1.82
PRICKLE1Q96MT3 MIR4449-201ENST00000578365 66 ntBASIC26.42■■□□□ 1.82
PRICKLE1Q96MT3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PRICKLE1Q96MT3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
PRICKLE1Q96MT3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.41■■□□□ 1.82
PRICKLE1Q96MT3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PRICKLE1Q96MT3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRICKLE1Q96MT3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.4■■□□□ 1.82
PRICKLE1Q96MT3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRICKLE1Q96MT3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.4■■□□□ 1.82
PRICKLE1Q96MT3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PRICKLE1Q96MT3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRICKLE1Q96MT3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRICKLE1Q96MT3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PRICKLE1Q96MT3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.38■■□□□ 1.81
PRICKLE1Q96MT3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PRICKLE1Q96MT3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRICKLE1Q96MT3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.37■■□□□ 1.81
PRICKLE1Q96MT3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRICKLE1Q96MT3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PRICKLE1Q96MT3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PRICKLE1Q96MT3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.35■■□□□ 1.81
PRICKLE1Q96MT3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PRICKLE1Q96MT3 AC110285.7-201ENST00000624417 1536 ntBASIC26.35■■□□□ 1.81
PRICKLE1Q96MT3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.35■■□□□ 1.81
PRICKLE1Q96MT3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.35■■□□□ 1.81
PRICKLE1Q96MT3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PRICKLE1Q96MT3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PRICKLE1Q96MT3 AC100797.4-201ENST00000631653 1827 ntBASIC26.34■■□□□ 1.81
PRICKLE1Q96MT3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.33■■□□□ 1.81
PRICKLE1Q96MT3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.33■■□□□ 1.81
PRICKLE1Q96MT3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.33■■□□□ 1.81
PRICKLE1Q96MT3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
PRICKLE1Q96MT3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PRICKLE1Q96MT3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PRICKLE1Q96MT3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.31■■□□□ 1.8
PRICKLE1Q96MT3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PRICKLE1Q96MT3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms