Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
ATP6V0A1Q93050 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
ATP6V0A1Q93050 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
ATP6V0A1Q93050 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.92■■■□□ 2.22
ATP6V0A1Q93050 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
ATP6V0A1Q93050 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
ATP6V0A1Q93050 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ATP6V0A1Q93050 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.9■■■□□ 2.22
ATP6V0A1Q93050 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
ATP6V0A1Q93050 AC135983.2-203ENST00000454486 1613 ntBASIC28.9■■■□□ 2.22
ATP6V0A1Q93050 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
ATP6V0A1Q93050 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ATP6V0A1Q93050 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.89■■■□□ 2.22
ATP6V0A1Q93050 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.21
ATP6V0A1Q93050 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ATP6V0A1Q93050 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ATP6V0A1Q93050 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.87■■■□□ 2.21
ATP6V0A1Q93050 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
ATP6V0A1Q93050 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.86■■■□□ 2.21
ATP6V0A1Q93050 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.86■■■□□ 2.21
ATP6V0A1Q93050 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
ATP6V0A1Q93050 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.86■■■□□ 2.21
ATP6V0A1Q93050 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
ATP6V0A1Q93050 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
ATP6V0A1Q93050 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.85■■■□□ 2.21
ATP6V0A1Q93050 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.84■■■□□ 2.21
ATP6V0A1Q93050 WHAMMP2-203ENST00000563942 1603 ntBASIC28.84■■■□□ 2.21
ATP6V0A1Q93050 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ATP6V0A1Q93050 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ATP6V0A1Q93050 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ATP6V0A1Q93050 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ATP6V0A1Q93050 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ATP6V0A1Q93050 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
ATP6V0A1Q93050 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
ATP6V0A1Q93050 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
ATP6V0A1Q93050 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
ATP6V0A1Q93050 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ATP6V0A1Q93050 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
ATP6V0A1Q93050 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
ATP6V0A1Q93050 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.82■■■□□ 2.2
ATP6V0A1Q93050 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
ATP6V0A1Q93050 ABCB10P1-201ENST00000614297 2181 ntBASIC28.79■■■□□ 2.2
ATP6V0A1Q93050 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
ATP6V0A1Q93050 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
ATP6V0A1Q93050 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.79■■■□□ 2.2
ATP6V0A1Q93050 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.79■■■□□ 2.2
ATP6V0A1Q93050 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ATP6V0A1Q93050 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ATP6V0A1Q93050 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
ATP6V0A1Q93050 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
ATP6V0A1Q93050 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.78■■■□□ 2.2
ATP6V0A1Q93050 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.78■■■□□ 2.2
ATP6V0A1Q93050 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.78■■■□□ 2.2
ATP6V0A1Q93050 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
ATP6V0A1Q93050 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
ATP6V0A1Q93050 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.77■■■□□ 2.2
ATP6V0A1Q93050 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ATP6V0A1Q93050 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ATP6V0A1Q93050 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ATP6V0A1Q93050 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.76■■■□□ 2.19
ATP6V0A1Q93050 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
ATP6V0A1Q93050 AP004833.2-201ENST00000532228 1454 ntBASIC28.75■■■□□ 2.19
ATP6V0A1Q93050 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ATP6V0A1Q93050 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
ATP6V0A1Q93050 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
ATP6V0A1Q93050 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ATP6V0A1Q93050 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ATP6V0A1Q93050 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
ATP6V0A1Q93050 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.73■■■□□ 2.19
ATP6V0A1Q93050 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ATP6V0A1Q93050 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ATP6V0A1Q93050 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
ATP6V0A1Q93050 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ATP6V0A1Q93050 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
ATP6V0A1Q93050 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.71■■■□□ 2.19
ATP6V0A1Q93050 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
ATP6V0A1Q93050 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ATP6V0A1Q93050 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
ATP6V0A1Q93050 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
ATP6V0A1Q93050 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.7■■■□□ 2.18
ATP6V0A1Q93050 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.7■■■□□ 2.18
ATP6V0A1Q93050 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
ATP6V0A1Q93050 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.7■■■□□ 2.18
ATP6V0A1Q93050 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ATP6V0A1Q93050 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
ATP6V0A1Q93050 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
ATP6V0A1Q93050 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ATP6V0A1Q93050 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.69■■■□□ 2.18
ATP6V0A1Q93050 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ATP6V0A1Q93050 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ATP6V0A1Q93050 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ATP6V0A1Q93050 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ATP6V0A1Q93050 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.67■■■□□ 2.18
ATP6V0A1Q93050 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
ATP6V0A1Q93050 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ATP6V0A1Q93050 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ATP6V0A1Q93050 AL139393.2-201ENST00000608721 2025 ntBASIC28.65■■■□□ 2.18
ATP6V0A1Q93050 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
ATP6V0A1Q93050 GPX1-201ENST00000419349 1106 ntBASIC28.65■■■□□ 2.18
ATP6V0A1Q93050 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.65■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms