Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.18■□□□□ 0.34
LINC01561Q8N1V8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01561Q8N1V8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LINC01561Q8N1V8 SETD8P1-201ENST00000623146 1180 ntBASIC17.17■□□□□ 0.34
LINC01561Q8N1V8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01561Q8N1V8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LINC01561Q8N1V8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01561Q8N1V8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01561Q8N1V8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01561Q8N1V8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01561Q8N1V8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01561Q8N1V8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01561Q8N1V8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
LINC01561Q8N1V8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.14■□□□□ 0.33
LINC01561Q8N1V8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01561Q8N1V8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LINC01561Q8N1V8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LINC01561Q8N1V8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01561Q8N1V8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01561Q8N1V8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01561Q8N1V8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
LINC01561Q8N1V8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01561Q8N1V8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01561Q8N1V8 AP002414.2-202ENST00000590929 1450 ntBASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01561Q8N1V8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LINC01561Q8N1V8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC01561Q8N1V8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC01561Q8N1V8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
LINC01561Q8N1V8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC01561Q8N1V8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01561Q8N1V8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC01561Q8N1V8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01561Q8N1V8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01561Q8N1V8 AL391121.1-201ENST00000607967 1349 ntBASIC17.1■□□□□ 0.33
LINC01561Q8N1V8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC01561Q8N1V8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LINC01561Q8N1V8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LINC01561Q8N1V8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01561Q8N1V8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01561Q8N1V8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LINC01561Q8N1V8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01561Q8N1V8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01561Q8N1V8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01561Q8N1V8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01561Q8N1V8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.07■□□□□ 0.32
LINC01561Q8N1V8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01561Q8N1V8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01561Q8N1V8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01561Q8N1V8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LINC01561Q8N1V8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01561Q8N1V8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01561Q8N1V8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01561Q8N1V8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01561Q8N1V8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01561Q8N1V8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LINC01561Q8N1V8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01561Q8N1V8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LINC01561Q8N1V8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01561Q8N1V8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01561Q8N1V8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC01561Q8N1V8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC01561Q8N1V8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LINC01561Q8N1V8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
LINC01561Q8N1V8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.04■□□□□ 0.32
LINC01561Q8N1V8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LINC01561Q8N1V8 AC100797.4-201ENST00000631653 1827 ntBASIC17.04■□□□□ 0.32
LINC01561Q8N1V8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LINC01561Q8N1V8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LINC01561Q8N1V8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01561Q8N1V8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01561Q8N1V8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC01561Q8N1V8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01561Q8N1V8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01561Q8N1V8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01561Q8N1V8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01561Q8N1V8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LINC01561Q8N1V8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LINC01561Q8N1V8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC01561Q8N1V8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01561Q8N1V8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LINC01561Q8N1V8 AC018358.1-201ENST00000631079 1402 ntBASIC17.02■□□□□ 0.31
LINC01561Q8N1V8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01561Q8N1V8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
LINC01561Q8N1V8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01561Q8N1V8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01561Q8N1V8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01561Q8N1V8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LINC01561Q8N1V8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.01■□□□□ 0.31
LINC01561Q8N1V8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01561Q8N1V8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms