Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
DENND4AQ7Z401 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
DENND4AQ7Z401 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.03■■□□□ 1.92
DENND4AQ7Z401 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
DENND4AQ7Z401 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
DENND4AQ7Z401 WHAMMP2-203ENST00000563942 1603 ntBASIC27.02■■□□□ 1.92
DENND4AQ7Z401 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.02■■□□□ 1.92
DENND4AQ7Z401 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
DENND4AQ7Z401 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.02■■□□□ 1.92
DENND4AQ7Z401 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DENND4AQ7Z401 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
DENND4AQ7Z401 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27■■□□□ 1.91
DENND4AQ7Z401 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27■■□□□ 1.91
DENND4AQ7Z401 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27■■□□□ 1.91
DENND4AQ7Z401 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DENND4AQ7Z401 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
DENND4AQ7Z401 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
DENND4AQ7Z401 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DENND4AQ7Z401 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.96■■□□□ 1.91
DENND4AQ7Z401 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DENND4AQ7Z401 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.95■■□□□ 1.9
DENND4AQ7Z401 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.94■■□□□ 1.9
DENND4AQ7Z401 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
DENND4AQ7Z401 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DENND4AQ7Z401 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
DENND4AQ7Z401 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.93■■□□□ 1.9
DENND4AQ7Z401 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
DENND4AQ7Z401 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.93■■□□□ 1.9
DENND4AQ7Z401 AC092296.2-201ENST00000589470 999 ntBASIC26.92■■□□□ 1.9
DENND4AQ7Z401 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.92■■□□□ 1.9
DENND4AQ7Z401 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.92■■□□□ 1.9
DENND4AQ7Z401 AC018358.1-201ENST00000631079 1402 ntBASIC26.91■■□□□ 1.9
DENND4AQ7Z401 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.91■■□□□ 1.9
DENND4AQ7Z401 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.91■■□□□ 1.9
DENND4AQ7Z401 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
DENND4AQ7Z401 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
DENND4AQ7Z401 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.9■■□□□ 1.9
DENND4AQ7Z401 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
DENND4AQ7Z401 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
DENND4AQ7Z401 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.9■■□□□ 1.9
DENND4AQ7Z401 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
DENND4AQ7Z401 AL033527.3-201ENST00000566366 1196 ntBASIC26.89■■□□□ 1.9
DENND4AQ7Z401 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
DENND4AQ7Z401 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
DENND4AQ7Z401 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
DENND4AQ7Z401 KRT18P60-201ENST00000312876 1297 ntBASIC26.88■■□□□ 1.89
DENND4AQ7Z401 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
DENND4AQ7Z401 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.87■■□□□ 1.89
DENND4AQ7Z401 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
DENND4AQ7Z401 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.87■■□□□ 1.89
DENND4AQ7Z401 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
DENND4AQ7Z401 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.87■■□□□ 1.89
DENND4AQ7Z401 U85056.1-201ENST00000616429 682 ntBASIC26.87■■□□□ 1.89
DENND4AQ7Z401 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
DENND4AQ7Z401 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
DENND4AQ7Z401 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
DENND4AQ7Z401 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DENND4AQ7Z401 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.84■■□□□ 1.89
DENND4AQ7Z401 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
DENND4AQ7Z401 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.84■■□□□ 1.89
DENND4AQ7Z401 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
DENND4AQ7Z401 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
DENND4AQ7Z401 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
DENND4AQ7Z401 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
DENND4AQ7Z401 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
DENND4AQ7Z401 AC127502.1-201ENST00000399971 1502 ntBASIC26.83■■□□□ 1.89
DENND4AQ7Z401 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
DENND4AQ7Z401 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.83■■□□□ 1.88
DENND4AQ7Z401 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.83■■□□□ 1.88
DENND4AQ7Z401 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
DENND4AQ7Z401 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
DENND4AQ7Z401 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.81■■□□□ 1.88
DENND4AQ7Z401 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.81■■□□□ 1.88
DENND4AQ7Z401 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.8■■□□□ 1.88
DENND4AQ7Z401 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
DENND4AQ7Z401 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
DENND4AQ7Z401 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DENND4AQ7Z401 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
DENND4AQ7Z401 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
DENND4AQ7Z401 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
DENND4AQ7Z401 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.77■■□□□ 1.88
DENND4AQ7Z401 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.88
DENND4AQ7Z401 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
DENND4AQ7Z401 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
DENND4AQ7Z401 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
DENND4AQ7Z401 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
DENND4AQ7Z401 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.75■■□□□ 1.87
DENND4AQ7Z401 MIR219A2-201ENST00000608502 1504 ntBASIC26.75■■□□□ 1.87
DENND4AQ7Z401 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
DENND4AQ7Z401 AC110285.7-201ENST00000624417 1536 ntBASIC26.74■■□□□ 1.87
DENND4AQ7Z401 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DENND4AQ7Z401 AL157400.5-201ENST00000507624 621 ntBASIC26.74■■□□□ 1.87
DENND4AQ7Z401 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
DENND4AQ7Z401 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
DENND4AQ7Z401 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
DENND4AQ7Z401 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DENND4AQ7Z401 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
DENND4AQ7Z401 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
DENND4AQ7Z401 TSPY13P-201ENST00000338964 914 ntBASIC26.71■■□□□ 1.87
DENND4AQ7Z401 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms