Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
GABREP78334 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.65■■□□□ 1.54
GABREP78334 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
GABREP78334 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
GABREP78334 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
GABREP78334 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
GABREP78334 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
GABREP78334 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
GABREP78334 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
GABREP78334 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.62■■□□□ 1.53
GABREP78334 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
GABREP78334 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
GABREP78334 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
GABREP78334 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
GABREP78334 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
GABREP78334 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.61■■□□□ 1.53
GABREP78334 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.6■■□□□ 1.53
GABREP78334 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.6■■□□□ 1.53
GABREP78334 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
GABREP78334 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.59■■□□□ 1.53
GABREP78334 AL033527.3-201ENST00000566366 1196 ntBASIC24.59■■□□□ 1.53
GABREP78334 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
GABREP78334 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
GABREP78334 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
GABREP78334 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
GABREP78334 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
GABREP78334 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
GABREP78334 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.57■■□□□ 1.52
GABREP78334 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
GABREP78334 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
GABREP78334 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
GABREP78334 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
GABREP78334 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.56■■□□□ 1.52
GABREP78334 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
GABREP78334 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
GABREP78334 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
GABREP78334 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
GABREP78334 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
GABREP78334 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.54■■□□□ 1.52
GABREP78334 WHAMMP2-203ENST00000563942 1603 ntBASIC24.53■■□□□ 1.52
GABREP78334 AC127502.1-201ENST00000399971 1502 ntBASIC24.53■■□□□ 1.52
GABREP78334 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
GABREP78334 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.53■■□□□ 1.52
GABREP78334 U85056.1-201ENST00000616429 682 ntBASIC24.53■■□□□ 1.52
GABREP78334 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
GABREP78334 AC135983.2-203ENST00000454486 1613 ntBASIC24.52■■□□□ 1.52
GABREP78334 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
GABREP78334 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
GABREP78334 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
GABREP78334 AC018358.1-201ENST00000631079 1402 ntBASIC24.52■■□□□ 1.52
GABREP78334 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
GABREP78334 AC060814.1-201ENST00000554326 538 ntBASIC24.51■■□□□ 1.51
GABREP78334 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
GABREP78334 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
GABREP78334 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.5■■□□□ 1.51
GABREP78334 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
GABREP78334 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
GABREP78334 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
GABREP78334 AC110285.7-201ENST00000624417 1536 ntBASIC24.48■■□□□ 1.51
GABREP78334 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
GABREP78334 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
GABREP78334 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.46■■□□□ 1.51
GABREP78334 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
GABREP78334 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.46■■□□□ 1.51
GABREP78334 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.46■■□□□ 1.51
GABREP78334 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.46■■□□□ 1.51
GABREP78334 AC148477.6-201ENST00000623746 465 ntBASIC24.46■■□□□ 1.51
GABREP78334 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
GABREP78334 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
GABREP78334 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
GABREP78334 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
GABREP78334 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GABREP78334 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.43■■□□□ 1.5
GABREP78334 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.43■■□□□ 1.5
GABREP78334 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
GABREP78334 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
GABREP78334 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
GABREP78334 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.43■■□□□ 1.5
GABREP78334 TSPY13P-201ENST00000338964 914 ntBASIC24.42■■□□□ 1.5
GABREP78334 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
GABREP78334 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GABREP78334 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.42■■□□□ 1.5
GABREP78334 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
GABREP78334 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.41■■□□□ 1.5
GABREP78334 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.41■■□□□ 1.5
GABREP78334 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
GABREP78334 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.4■■□□□ 1.5
GABREP78334 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.4■■□□□ 1.5
GABREP78334 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
GABREP78334 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
GABREP78334 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
GABREP78334 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
GABREP78334 KRT18P60-201ENST00000312876 1297 ntBASIC24.38■■□□□ 1.49
GABREP78334 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.38■■□□□ 1.49
GABREP78334 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
GABREP78334 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
GABREP78334 MIR219A2-201ENST00000608502 1504 ntBASIC24.37■■□□□ 1.49
GABREP78334 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
GABREP78334 AC004987.1-201ENST00000428627 508 ntBASIC24.37■■□□□ 1.49
GABREP78334 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms