Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNAI2O43623 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI2O43623 AP004833.2-201ENST00000532228 1454 ntBASIC18.92■□□□□ 0.62
SNAI2O43623 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.92■□□□□ 0.62
SNAI2O43623 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.92■□□□□ 0.62
SNAI2O43623 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SNAI2O43623 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI2O43623 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI2O43623 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNAI2O43623 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.91■□□□□ 0.62
SNAI2O43623 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.91■□□□□ 0.62
SNAI2O43623 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNAI2O43623 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNAI2O43623 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SNAI2O43623 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.91■□□□□ 0.62
SNAI2O43623 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNAI2O43623 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.9■□□□□ 0.62
SNAI2O43623 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAI2O43623 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.9■□□□□ 0.62
SNAI2O43623 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAI2O43623 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNAI2O43623 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNAI2O43623 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.89■□□□□ 0.61
SNAI2O43623 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.89■□□□□ 0.61
SNAI2O43623 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAI2O43623 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SNAI2O43623 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNAI2O43623 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI2O43623 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNAI2O43623 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.88■□□□□ 0.61
SNAI2O43623 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNAI2O43623 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAI2O43623 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNAI2O43623 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.87■□□□□ 0.61
SNAI2O43623 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.87■□□□□ 0.61
SNAI2O43623 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAI2O43623 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNAI2O43623 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SNAI2O43623 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNAI2O43623 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNAI2O43623 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SNAI2O43623 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SNAI2O43623 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI2O43623 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI2O43623 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.85■□□□□ 0.61
SNAI2O43623 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI2O43623 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.85■□□□□ 0.61
SNAI2O43623 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNAI2O43623 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI2O43623 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI2O43623 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI2O43623 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI2O43623 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.83■□□□□ 0.61
SNAI2O43623 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNAI2O43623 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNAI2O43623 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNAI2O43623 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNAI2O43623 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNAI2O43623 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.82■□□□□ 0.6
SNAI2O43623 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI2O43623 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI2O43623 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.82■□□□□ 0.6
SNAI2O43623 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI2O43623 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAI2O43623 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.81■□□□□ 0.6
SNAI2O43623 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.81■□□□□ 0.6
SNAI2O43623 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNAI2O43623 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SNAI2O43623 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI2O43623 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI2O43623 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI2O43623 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI2O43623 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI2O43623 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI2O43623 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI2O43623 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI2O43623 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI2O43623 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI2O43623 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNAI2O43623 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI2O43623 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI2O43623 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI2O43623 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.78■□□□□ 0.6
SNAI2O43623 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI2O43623 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI2O43623 LINC01003-201ENST00000564834 1764 ntBASIC18.78■□□□□ 0.6
SNAI2O43623 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SNAI2O43623 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAI2O43623 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SNAI2O43623 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.76■□□□□ 0.59
SNAI2O43623 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI2O43623 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI2O43623 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI2O43623 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI2O43623 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI2O43623 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI2O43623 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI2O43623 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.76■□□□□ 0.59
SNAI2O43623 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNAI2O43623 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms