Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 CAPN15-208ENST00000637507 1482 ntTSL 524.04■■□□□ 1.449e-7■■■□□ 15.8
EIF3DO15371 USP34-203ENST00000436269 1827 ntTSL 53.47□□□□□ -1.852e-6■■■□□ 15.8
EIF3DO15371 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.215e-8■■■□□ 15.7
EIF3DO15371 PKD1-202ENST00000415938 3386 ntTSL 514.33□□□□□ -0.121e-6■■■□□ 15.7
EIF3DO15371 PKD1-216ENST00000483731 4193 ntTSL 513.42□□□□□ -0.261e-6■■■□□ 15.7
EIF3DO15371 EIF4G1-211ENST00000422614 750 ntTSL 511.36□□□□□ -0.592e-8■■■□□ 15.6
EIF3DO15371 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.192e-6■■■□□ 15.6
EIF3DO15371 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.442e-6■■■□□ 15.6
EIF3DO15371 EIF4G1-230ENST00000460829 1804 ntTSL 222.07■■□□□ 1.122e-8■■■□□ 15.6
EIF3DO15371 EIF4G1-231ENST00000464548 637 ntTSL 513.93□□□□□ -0.182e-8■■■□□ 15.6
EIF3DO15371 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.031e-6■■■□□ 15.5
EIF3DO15371 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.784e-7■■■□□ 15.5
EIF3DO15371 CHD2-226ENST00000636881 3545 ntTSL 59.06□□□□□ -0.964e-7■■■□□ 15.5
EIF3DO15371 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.84□□□□□ -1.154e-7■■■□□ 15.5
EIF3DO15371 CHD2-227ENST00000637572 4452 ntTSL 56□□□□□ -1.454e-7■■■□□ 15.5
EIF3DO15371 CHD2-221ENST00000635856 4236 ntTSL 55.87□□□□□ -1.474e-7■■■□□ 15.5
EIF3DO15371 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.142e-6■■■□□ 15.5
EIF3DO15371 VARS2-209ENST00000477288 6054 ntTSL 219.28■□□□□ 0.683e-6■■■□□ 15.5
EIF3DO15371 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.333e-6■■■□□ 15.5
EIF3DO15371 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.08■□□□□ 0.173e-6■■■□□ 15.5
EIF3DO15371 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.07■□□□□ 0.163e-6■■■□□ 15.5
EIF3DO15371 VARS2-213ENST00000625423 3362 ntTSL 2 BASIC12.26□□□□□ -0.453e-6■■■□□ 15.5
EIF3DO15371 HIST1H2BG-201ENST00000541790 1534 ntAPPRIS P1 BASIC13.12□□□□□ -0.313e-26■■■□□ 15.4
EIF3DO15371 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.23■□□□□ 0.672e-6■■■□□ 15.4
EIF3DO15371 CAPN15-207ENST00000568988 911 ntTSL 328.77■■■□□ 2.29e-7■■■□□ 15.4
EIF3DO15371 CAPN15-202ENST00000562370 942 ntTSL 228.77■■■□□ 2.29e-7■■■□□ 15.4
EIF3DO15371 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.669e-7■■■□□ 15.4
EIF3DO15371 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC12.13□□□□□ -0.479e-7■■■□□ 15.3
EIF3DO15371 SRCAP-205ENST00000483083 5937 ntTSL 211.16□□□□□ -0.629e-7■■■□□ 15.3
EIF3DO15371 AL139353.1-201ENST00000549185 3860 ntTSL 29.92□□□□□ -0.824e-6■■■□□ 15.3
EIF3DO15371 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.534e-6■■■□□ 15.3
EIF3DO15371 TOM1-216ENST00000492723 2568 ntTSL 218.41■□□□□ 0.546e-7■■■□□ 15.3
EIF3DO15371 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.15■□□□□ 0.342e-6■■■□□ 15.3
EIF3DO15371 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.332e-6■■■□□ 15.3
EIF3DO15371 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.052e-6■■■□□ 15.3
EIF3DO15371 EHMT1-224ENST00000630754 709 ntTSL 320.28■□□□□ 0.849e-8■■■□□ 15.2
EIF3DO15371 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.25■□□□□ 0.839e-8■■■□□ 15.2
EIF3DO15371 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.659e-8■■■□□ 15.2
EIF3DO15371 EHMT1-202ENST00000460486 818 ntTSL 518.77■□□□□ 0.69e-8■■■□□ 15.2
EIF3DO15371 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.589e-8■■■□□ 15.2
EIF3DO15371 EHMT1-219ENST00000626066 1297 ntTSL 518.35■□□□□ 0.539e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-207ENST00000417017 684 ntTSL 517.83■□□□□ 0.449e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-208ENST00000419681 644 ntTSL 517.38■□□□□ 0.379e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-210ENST00000444735 691 ntTSL 517.3■□□□□ 0.369e-8■■■□□ 15.2
EIF3DO15371 EHMT1-250ENST00000637977 2167 ntTSL 517.12■□□□□ 0.339e-8■■■□□ 15.2
EIF3DO15371 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.13■□□□□ 0.179e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-216ENST00000485623 568 ntTSL 216.1■□□□□ 0.179e-8■■■□□ 15.2
EIF3DO15371 EHMT1-220ENST00000626216 558 ntTSL 315.24■□□□□ 0.039e-8■■■□□ 15.2
EIF3DO15371 EHMT1-201ENST00000371394 2679 ntTSL 214.97□□□□□ -0.019e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC13.8□□□□□ -0.29e-8■■■□□ 15.2
EIF3DO15371 EHMT1-221ENST00000629335 3600 ntTSL 5 BASIC12.77□□□□□ -0.369e-8■■■□□ 15.2
EIF3DO15371 EHMT1-228ENST00000636027 3114 ntTSL 512.66□□□□□ -0.389e-8■■■□□ 15.2
EIF3DO15371 EHMT1-215ENST00000492232 710 ntTSL 312.52□□□□□ -0.419e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.4□□□□□ -0.429e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-203ENST00000392017 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.489e-8■■■□□ 15.2
EIF3DO15371 EHMT1-222ENST00000629417 882 ntTSL 311.81□□□□□ -0.529e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-205ENST00000392020 3213 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.619e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-215ENST00000479942 3559 ntTSL 1 (best)11.07□□□□□ -0.649e-8■■■□□ 15.2
EIF3DO15371 EHMT1-237ENST00000637261 4208 ntTSL 510.87□□□□□ -0.679e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-206ENST00000392021 3301 ntTSL 1 (best)10.52□□□□□ -0.739e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC10.3□□□□□ -0.769e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-214ENST00000474148 4208 ntTSL 29.74□□□□□ -0.859e-8■■■□□ 15.2
EIF3DO15371 AC015802.4-201ENST00000589963 578 ntTSL 3 BASIC9.15□□□□□ -0.949e-8■■■□□ 15.2
EIF3DO15371 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC8.18□□□□□ -1.19e-8■■■□□ 15.2
EIF3DO15371 ATG16L1-209ENST00000431917 589 ntTSL 57.75□□□□□ -1.179e-8■■■□□ 15.2
EIF3DO15371 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.673e-6■■■□□ 15.2
EIF3DO15371 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.823e-6■■■□□ 15.2
EIF3DO15371 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.073e-6■■■□□ 15.2
EIF3DO15371 NQO1-207ENST00000569118 519 ntTSL 211.16□□□□□ -0.621e-7■■■□□ 15.2
EIF3DO15371 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.031e-7■■■□□ 15.2
EIF3DO15371 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.48□□□□□ -1.051e-7■■■□□ 15.2
EIF3DO15371 NQO1-204ENST00000439109 924 ntTSL 2 BASIC8.02□□□□□ -1.131e-7■■■□□ 15.2
EIF3DO15371 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.49□□□□□ -1.211e-7■■■□□ 15.2
EIF3DO15371 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.36□□□□□ -1.231e-7■■■□□ 15.2
EIF3DO15371 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.7□□□□□ -1.51e-7■■■□□ 15.2
EIF3DO15371 TOM1-205ENST00000424387 2211 ntTSL 519.64■□□□□ 0.743e-7■■■□□ 15.2
EIF3DO15371 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.563e-7■■■□□ 15.2
EIF3DO15371 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.543e-7■■■□□ 15.2
EIF3DO15371 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.51■□□□□ 0.393e-7■■■□□ 15.2
EIF3DO15371 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.31■□□□□ 0.363e-7■■■□□ 15.2
EIF3DO15371 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.23■□□□□ 0.353e-7■■■□□ 15.2
EIF3DO15371 TOM1-203ENST00000404284 2622 ntTSL 217.1■□□□□ 0.333e-7■■■□□ 15.2
EIF3DO15371 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC13.82□□□□□ -0.25e-13■■■□□ 15.1
EIF3DO15371 LUC7L3-209ENST00000506686 582 ntTSL 413.41□□□□□ -0.265e-13■■■□□ 15.1
EIF3DO15371 MACF1-218ENST00000484393 750 ntTSL 26.46□□□□□ -1.385e-8■■■□□ 15.1
EIF3DO15371 ZNF787-201ENST00000586787 386 ntTSL 1 (best)20.56■□□□□ 0.883e-6■■■□□ 15.1
EIF3DO15371 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.462e-6■■■□□ 15.1
EIF3DO15371 TBC1D16-204ENST00000571872 567 ntTSL 519.02■□□□□ 0.642e-6■■■□□ 15.1
EIF3DO15371 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.52e-6■■■□□ 15.1
EIF3DO15371 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.424e-6■■■□□ 15
EIF3DO15371 PKD1-222ENST00000496574 4419 ntTSL 514.9□□□□□ -0.027e-7■■■□□ 15
EIF3DO15371 PKD1-219ENST00000486339 4443 ntTSL 514.5□□□□□ -0.097e-7■■■□□ 15
EIF3DO15371 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.183e-6■■■□□ 15
EIF3DO15371 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.382e-6■■■□□ 15
EIF3DO15371 RXRA-203ENST00000484822 5215 ntTSL 215.61■□□□□ 0.092e-6■■■□□ 15
EIF3DO15371 HDAC4-204ENST00000446876 554 ntTSL 416.12■□□□□ 0.176e-11■■■□□ 14.9
EIF3DO15371 HDAC4-214ENST00000535493 2743 ntTSL 214.33□□□□□ -0.126e-11■■■□□ 14.9
EIF3DO15371 HDAC4-208ENST00000463007 3158 ntTSL 1 (best)13.32□□□□□ -0.286e-11■■■□□ 14.9
EIF3DO15371 MALRD1-202ENST00000377266 4461 ntTSL 511.07□□□□□ -0.647e-7■■■□□ 14.8
EIF3DO15371 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.637e-7■■■□□ 14.8
Retrieved 100 of 4,069 protein–RNA pairs in 179 ms