RNA–Protein interactions for RNA: ENST00000479942.5

ATG16L1-215, Transcript of autophagy related 16 like 1, humanhuman

TSL 1 (best)

Gene ATG16L1, Length 3,559 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG16L1-215ENST00000479942 NISCHQ9Y2I1 1504 aa20.28■□□□□ 0.84
ATG16L1-215ENST00000479942 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
ATG16L1-215ENST00000479942 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
ATG16L1-215ENST00000479942 SUPT5HO00267 1087 aaKnown RBP18.43■□□□□ 0.54
ATG16L1-215ENST00000479942 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
ATG16L1-215ENST00000479942 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
ATG16L1-215ENST00000479942 LOC105371045A0A1W2PR82 267 aa17.29■□□□□ 0.36
ATG16L1-215ENST00000479942 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
ATG16L1-215ENST00000479942 FAM9AQ8IZU1 332 aaPredicted RBP17.25■□□□□ 0.35
ATG16L1-215ENST00000479942 PPARGC1BQ86YN6 1023 aaKnown RBP17.09■□□□□ 0.33
ATG16L1-215ENST00000479942 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
ATG16L1-215ENST00000479942 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
ATG16L1-215ENST00000479942 TTBK1Q5TCY1 1321 aaPredicted RBP16.91■□□□□ 0.3
ATG16L1-215ENST00000479942 HRCP23327 699 aa16.81■□□□□ 0.28
ATG16L1-215ENST00000479942 TRIM41Q8WV44 630 aa16.81■□□□□ 0.28
ATG16L1-215ENST00000479942 ABCC9O60706 1549 aa16.67■□□□□ 0.26
ATG16L1-215ENST00000479942 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
ATG16L1-215ENST00000479942 SCRIBQ14160 1630 aa16.53■□□□□ 0.24
ATG16L1-215ENST00000479942 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
ATG16L1-215ENST00000479942 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
ATG16L1-215ENST00000479942 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
ATG16L1-215ENST00000479942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
ATG16L1-215ENST00000479942 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
ATG16L1-215ENST00000479942 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
ATG16L1-215ENST00000479942 UBTFP17480 764 aaKnown RBP16.22■□□□□ 0.19
ATG16L1-215ENST00000479942 CCER1Q8TC90 406 aaPredicted RBP16.21■□□□□ 0.19
ATG16L1-215ENST00000479942 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
ATG16L1-215ENST00000479942 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
ATG16L1-215ENST00000479942 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
ATG16L1-215ENST00000479942 MROH2BQ7Z745 1585 aa16.01■□□□□ 0.15
ATG16L1-215ENST00000479942 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
ATG16L1-215ENST00000479942 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
ATG16L1-215ENST00000479942 WIZO95785 1651 aa15.89■□□□□ 0.14
ATG16L1-215ENST00000479942 ABCC8Q09428 1581 aa15.83■□□□□ 0.13
ATG16L1-215ENST00000479942 ITGAEP38570 1179 aa15.81■□□□□ 0.12
ATG16L1-215ENST00000479942 APLP2Q06481 763 aa15.79■□□□□ 0.12
ATG16L1-215ENST00000479942 SOGA1O94964 1423 aa15.79■□□□□ 0.12
ATG16L1-215ENST00000479942 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
ATG16L1-215ENST00000479942 CCDC88BA6NC98 1476 aa15.76■□□□□ 0.11
ATG16L1-215ENST00000479942 ATP1B4Q9UN42 357 aaPredicted RBP15.74■□□□□ 0.11
ATG16L1-215ENST00000479942 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
ATG16L1-215ENST00000479942 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
ATG16L1-215ENST00000479942 RUSC2Q8N2Y8 1516 aa15.71■□□□□ 0.11
ATG16L1-215ENST00000479942 NACADO15069 1562 aa15.66■□□□□ 0.1
ATG16L1-215ENST00000479942 NEUROD1Q13562 356 aa15.64■□□□□ 0.09
ATG16L1-215ENST00000479942 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
ATG16L1-215ENST00000479942 GTF3C3Q9Y5Q9 886 aa15.57■□□□□ 0.08
ATG16L1-215ENST00000479942 P3H3Q8IVL6 736 aa15.54■□□□□ 0.08
ATG16L1-215ENST00000479942 BAZ1AQ9NRL2 1556 aaPredicted RBP15.52■□□□□ 0.07
ATG16L1-215ENST00000479942 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
ATG16L1-215ENST00000479942 CENPBP07199 599 aaPredicted RBP15.45■□□□□ 0.06
ATG16L1-215ENST00000479942 WRNQ14191 1432 aaPredicted RBP eCLIP15.44■□□□□ 0.06
ATG16L1-215ENST00000479942 MIER1Q8N108 512 aa15.43■□□□□ 0.06
ATG16L1-215ENST00000479942 ZNF316A6NFI3 1004 aaPredicted RBP15.41■□□□□ 0.06
ATG16L1-215ENST00000479942 CLIP1P30622 1438 aa15.36■□□□□ 0.05
ATG16L1-215ENST00000479942 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
ATG16L1-215ENST00000479942 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
ATG16L1-215ENST00000479942 KANK4Q5T7N3 995 aaPredicted RBP15.35■□□□□ 0.05
ATG16L1-215ENST00000479942 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
ATG16L1-215ENST00000479942 HIRIP3Q9BW71 556 aaPredicted RBP15.34■□□□□ 0.05
ATG16L1-215ENST00000479942 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.04
ATG16L1-215ENST00000479942 ARID3CA6NKF2 412 aa15.33■□□□□ 0.04
ATG16L1-215ENST00000479942 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
ATG16L1-215ENST00000479942 GOLGA3Q08378 1498 aa15.28■□□□□ 0.04
ATG16L1-215ENST00000479942 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.03
ATG16L1-215ENST00000479942 RAPGEF2Q9Y4G8 1499 aa15.27■□□□□ 0.03
ATG16L1-215ENST00000479942 PELP1Q8IZL8 1130 aaKnown RBP15.25■□□□□ 0.03
ATG16L1-215ENST00000479942 CNGB1Q14028 1251 aaPredicted RBP15.24■□□□□ 0.03
ATG16L1-215ENST00000479942 BCANQ96GW7 911 aa15.17■□□□□ 0.02
ATG16L1-215ENST00000479942 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
ATG16L1-215ENST00000479942 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
ATG16L1-215ENST00000479942 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
ATG16L1-215ENST00000479942 SIN3AQ96ST3 1273 aa15.13■□□□□ 0.01
ATG16L1-215ENST00000479942 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
ATG16L1-215ENST00000479942 KCNH8Q96L42 1107 aa15.11■□□□□ 0.01
ATG16L1-215ENST00000479942 BICRAQ9NZM4 1560 aa15.09■□□□□ 0.01
ATG16L1-215ENST00000479942 EEA1Q15075 1411 aa15.08■□□□□ 0.01
ATG16L1-215ENST00000479942 DDX10Q13206 875 aaKnown RBP15.08■□□□□ 0
ATG16L1-215ENST00000479942 VPS8Q8N3P4 1428 aa15.07■□□□□ 0
ATG16L1-215ENST00000479942 EIF4G1Q04637 1599 aaKnown RBP15.06■□□□□ 0
ATG16L1-215ENST00000479942 CHIC2Q9UKJ5 165 aa15.01□□□□□ -0.01
ATG16L1-215ENST00000479942 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
ATG16L1-215ENST00000479942 SENP3-EIF4A1A0A087X0R7 540 aa14.99□□□□□ -0.01
ATG16L1-215ENST00000479942 TRIM52Q96A61 297 aa14.96□□□□□ -0.01
ATG16L1-215ENST00000479942 CUX2O14529 1486 aa14.95□□□□□ -0.02
ATG16L1-215ENST00000479942 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
ATG16L1-215ENST00000479942 KIF27Q86VH2 1401 aa14.93□□□□□ -0.02
ATG16L1-215ENST00000479942 KIF21BO75037 1637 aa14.93□□□□□ -0.02
ATG16L1-215ENST00000479942 ARAP1Q96P48 1450 aa14.91□□□□□ -0.02
ATG16L1-215ENST00000479942 DHX57Q6P158 1386 aaKnown RBP14.91□□□□□ -0.02
ATG16L1-215ENST00000479942 RRP7BPQ9NSQ0 103 aa14.88□□□□□ -0.03
ATG16L1-215ENST00000479942 CCNB3Q8WWL7 1395 aa14.88□□□□□ -0.03
ATG16L1-215ENST00000479942 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
ATG16L1-215ENST00000479942 FBLN2P98095 1184 aa14.86□□□□□ -0.03
ATG16L1-215ENST00000479942 RAB3GAP2Q9H2M9 1393 aa14.85□□□□□ -0.03
ATG16L1-215ENST00000479942 IRX6P78412 446 aaPredicted RBP14.84□□□□□ -0.03
ATG16L1-215ENST00000479942 TDRD9Q8NDG6 1382 aaKnown RBP14.84□□□□□ -0.03
ATG16L1-215ENST00000479942 FOXD1Q16676 465 aa14.83□□□□□ -0.04
ATG16L1-215ENST00000479942 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
ATG16L1-215ENST00000479942 IGF1RP08069 1367 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms