RNA–Protein interactions for RNA: ENST00000484393.1

MACF1-218, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-218ENST00000484393 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
MACF1-218ENST00000484393 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
MACF1-218ENST00000484393 SENP3Q9H4L4 574 aaPredicted RBP17.95■□□□□ 0.46
MACF1-218ENST00000484393 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
MACF1-218ENST00000484393 FOXD1Q16676 465 aa16.65■□□□□ 0.26
MACF1-218ENST00000484393 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
MACF1-218ENST00000484393 PIAS4Q8N2W9 510 aaPredicted RBP15.73■□□□□ 0.11
MACF1-218ENST00000484393 ADRA2BP18089 450 aa15.7■□□□□ 0.1
MACF1-218ENST00000484393 PPP6R1Q9UPN7 881 aa15.64■□□□□ 0.09
MACF1-218ENST00000484393 MSH5O43196 834 aa15.6■□□□□ 0.09
MACF1-218ENST00000484393 POTEDQ86YR6 584 aa14.93□□□□□ -0.02
MACF1-218ENST00000484393 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
MACF1-218ENST00000484393 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
MACF1-218ENST00000484393 NISCHQ9Y2I1 1504 aa14.23□□□□□ -0.13
MACF1-218ENST00000484393 DMRT2Q9Y5R5 561 aa14.2□□□□□ -0.14
MACF1-218ENST00000484393 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
MACF1-218ENST00000484393 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
MACF1-218ENST00000484393 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
MACF1-218ENST00000484393 NCBP3Q53F19 620 aaKnown RBP13.77□□□□□ -0.21
MACF1-218ENST00000484393 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
MACF1-218ENST00000484393 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
MACF1-218ENST00000484393 KCNA4P22459 653 aa13.6□□□□□ -0.23
MACF1-218ENST00000484393 NPM3O75607 178 aaKnown RBP13.45□□□□□ -0.26
MACF1-218ENST00000484393 CACNB1Q02641 598 aaPredicted RBP13.4□□□□□ -0.26
MACF1-218ENST00000484393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.29
MACF1-218ENST00000484393 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
MACF1-218ENST00000484393 ABCC9O60706 1549 aa13.24□□□□□ -0.29
MACF1-218ENST00000484393 C1QBPQ07021 282 aaKnown RBP13.1□□□□□ -0.31
MACF1-218ENST00000484393 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
MACF1-218ENST00000484393 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
MACF1-218ENST00000484393 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
MACF1-218ENST00000484393 CAPN15O75808 1086 aa12.77□□□□□ -0.37
MACF1-218ENST00000484393 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
MACF1-218ENST00000484393 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
MACF1-218ENST00000484393 APLP2Q06481 763 aa12.67□□□□□ -0.38
MACF1-218ENST00000484393 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
MACF1-218ENST00000484393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
MACF1-218ENST00000484393 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
MACF1-218ENST00000484393 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
MACF1-218ENST00000484393 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
MACF1-218ENST00000484393 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
MACF1-218ENST00000484393 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
MACF1-218ENST00000484393 MYCNP04198 464 aaPredicted RBP12.51□□□□□ -0.41
MACF1-218ENST00000484393 DNAJC5Q9H3Z4 198 aa12.51□□□□□ -0.41
MACF1-218ENST00000484393 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
MACF1-218ENST00000484393 ZBTB22O15209 634 aa12.47□□□□□ -0.41
MACF1-218ENST00000484393 DSG3P32926 999 aa12.47□□□□□ -0.41
MACF1-218ENST00000484393 ABCB7O75027 752 aa12.46□□□□□ -0.41
MACF1-218ENST00000484393 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
MACF1-218ENST00000484393 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
MACF1-218ENST00000484393 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
MACF1-218ENST00000484393 POLA2Q14181 598 aa12.21□□□□□ -0.45
MACF1-218ENST00000484393 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
MACF1-218ENST00000484393 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
MACF1-218ENST00000484393 NACADO15069 1562 aa12.06□□□□□ -0.48
MACF1-218ENST00000484393 DCAF8L2P0C7V8 631 aa12.03□□□□□ -0.48
MACF1-218ENST00000484393 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
MACF1-218ENST00000484393 CECR2Q9BXF3 1484 aa12.01□□□□□ -0.49
MACF1-218ENST00000484393 ZBTB12Q9Y330 459 aaPredicted RBP11.99□□□□□ -0.49
MACF1-218ENST00000484393 UNC13AQ9UPW8 1703 aa11.94□□□□□ -0.5
MACF1-218ENST00000484393 BICRAQ9NZM4 1560 aa11.92□□□□□ -0.5
MACF1-218ENST00000484393 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
MACF1-218ENST00000484393 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
MACF1-218ENST00000484393 FBLN2P98095 1184 aa11.82□□□□□ -0.52
MACF1-218ENST00000484393 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
MACF1-218ENST00000484393 POTEHQ6S545 545 aa11.78□□□□□ -0.52
MACF1-218ENST00000484393 DCAF1Q9Y4B6 1507 aa11.74□□□□□ -0.53
MACF1-218ENST00000484393 MYO15BQ96JP2 1530 aa11.73□□□□□ -0.53
MACF1-218ENST00000484393 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.54
MACF1-218ENST00000484393 SHROOM4Q9ULL8 1493 aa11.7□□□□□ -0.54
MACF1-218ENST00000484393 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
MACF1-218ENST00000484393 TRIM41Q8WV44 630 aa11.69□□□□□ -0.54
MACF1-218ENST00000484393 SLC24A1O60721 1099 aa11.67□□□□□ -0.54
MACF1-218ENST00000484393 CUX2O14529 1486 aa11.67□□□□□ -0.54
MACF1-218ENST00000484393 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
MACF1-218ENST00000484393 SCRIBQ14160 1630 aa11.63□□□□□ -0.55
MACF1-218ENST00000484393 SPDYE2BA6NHP3 402 aa11.59□□□□□ -0.55
MACF1-218ENST00000484393 SPDYE6P0CI01 402 aa11.59□□□□□ -0.55
MACF1-218ENST00000484393 SPDYE2Q495Y8 402 aa11.59□□□□□ -0.55
MACF1-218ENST00000484393 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
MACF1-218ENST00000484393 MKRN4PQ13434 485 aaPredicted RBP11.55□□□□□ -0.56
MACF1-218ENST00000484393 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
MACF1-218ENST00000484393 ERCC6Q03468 1493 aa11.51□□□□□ -0.57
MACF1-218ENST00000484393 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
MACF1-218ENST00000484393 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
MACF1-218ENST00000484393 SPDYE1Q8NFV5 336 aaPredicted RBP11.4□□□□□ -0.58
MACF1-218ENST00000484393 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
MACF1-218ENST00000484393 SSUH2Q9Y2M2 353 aa11.35□□□□□ -0.59
MACF1-218ENST00000484393 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
MACF1-218ENST00000484393 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.614e-7■■■□□ 18.3
MACF1-218ENST00000484393 HAX1O00165 279 aa11.26□□□□□ -0.61
MACF1-218ENST00000484393 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
MACF1-218ENST00000484393 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
MACF1-218ENST00000484393 FKBP8Q14318 412 aa11.23□□□□□ -0.61
MACF1-218ENST00000484393 NCAPD3P42695 1498 aa11.18□□□□□ -0.62
MACF1-218ENST00000484393 NESP48681 1621 aa11.17□□□□□ -0.62
MACF1-218ENST00000484393 CHADLQ6NUI6 762 aa11.15□□□□□ -0.62
MACF1-218ENST00000484393 THOC2Q8NI27 1593 aaKnown RBP11.12□□□□□ -0.63
MACF1-218ENST00000484393 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
MACF1-218ENST00000484393 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms