RNA–Protein interactions for RNA: ENST00000415938.7

PKD1-202, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 3,386 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-202ENST00000415938 NISCHQ9Y2I1 1504 aa26.3■■□□□ 1.8
PKD1-202ENST00000415938 DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
PKD1-202ENST00000415938 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
PKD1-202ENST00000415938 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
PKD1-202ENST00000415938 PCGF6Q9BYE7 350 aa22.47■■□□□ 1.19
PKD1-202ENST00000415938 HRCP23327 699 aa22.43■■□□□ 1.18
PKD1-202ENST00000415938 PPARGC1BQ86YN6 1023 aaKnown RBP22.3■■□□□ 1.16
PKD1-202ENST00000415938 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
PKD1-202ENST00000415938 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
PKD1-202ENST00000415938 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
PKD1-202ENST00000415938 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
PKD1-202ENST00000415938 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
PKD1-202ENST00000415938 EHMT2Q96KQ7 1210 aa21.67■■□□□ 1.06
PKD1-202ENST00000415938 ABCC9O60706 1549 aa21.63■■□□□ 1.05
PKD1-202ENST00000415938 TRIM26Q12899 539 aaPredicted RBP21.54■■□□□ 1.04
PKD1-202ENST00000415938 FAM9AQ8IZU1 332 aaPredicted RBP21.51■■□□□ 1.03
PKD1-202ENST00000415938 DCAF1Q9Y4B6 1507 aa21.42■■□□□ 1.02
PKD1-202ENST00000415938 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
PKD1-202ENST00000415938 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
PKD1-202ENST00000415938 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
PKD1-202ENST00000415938 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
PKD1-202ENST00000415938 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
PKD1-202ENST00000415938 PELP1Q8IZL8 1130 aaKnown RBP21.05■□□□□ 0.96
PKD1-202ENST00000415938 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
PKD1-202ENST00000415938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.94■□□□□ 0.94
PKD1-202ENST00000415938 CCER1Q8TC90 406 aaPredicted RBP20.91■□□□□ 0.94
PKD1-202ENST00000415938 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
PKD1-202ENST00000415938 NEUROD1Q13562 356 aa20.74■□□□□ 0.91
PKD1-202ENST00000415938 CECR2Q9BXF3 1484 aa20.71■□□□□ 0.91
PKD1-202ENST00000415938 NACADO15069 1562 aa20.7■□□□□ 0.9
PKD1-202ENST00000415938 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
PKD1-202ENST00000415938 GTF3C3Q9Y5Q9 886 aa20.68■□□□□ 0.9
PKD1-202ENST00000415938 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
PKD1-202ENST00000415938 YTHDC1Q96MU7 727 aaKnown RBP20.63■□□□□ 0.89
PKD1-202ENST00000415938 RB1CC1Q8TDY2 1594 aa20.62■□□□□ 0.89
PKD1-202ENST00000415938 CENPBP07199 599 aaPredicted RBP20.61■□□□□ 0.89
PKD1-202ENST00000415938 MROH2BQ7Z745 1585 aa20.5■□□□□ 0.87
PKD1-202ENST00000415938 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
PKD1-202ENST00000415938 WIZO95785 1651 aa20.36■□□□□ 0.85
PKD1-202ENST00000415938 UBTFP17480 764 aaKnown RBP20.32■□□□□ 0.84
PKD1-202ENST00000415938 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
PKD1-202ENST00000415938 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
PKD1-202ENST00000415938 ZNF316A6NFI3 1004 aaPredicted RBP20.21■□□□□ 0.83
PKD1-202ENST00000415938 MIER1Q8N108 512 aa20.12■□□□□ 0.81
PKD1-202ENST00000415938 CEP162Q5TB80 1403 aa20.08■□□□□ 0.81
PKD1-202ENST00000415938 MYT1Q01538 1121 aa20.06■□□□□ 0.8
PKD1-202ENST00000415938 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
PKD1-202ENST00000415938 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
PKD1-202ENST00000415938 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
PKD1-202ENST00000415938 SOGA1O94964 1423 aa19.99■□□□□ 0.79
PKD1-202ENST00000415938 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
PKD1-202ENST00000415938 APLP2Q06481 763 aa19.97■□□□□ 0.79
PKD1-202ENST00000415938 CSRNP3Q8WYN3 585 aa19.97■□□□□ 0.79
PKD1-202ENST00000415938 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.77
PKD1-202ENST00000415938 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
PKD1-202ENST00000415938 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
PKD1-202ENST00000415938 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.77
PKD1-202ENST00000415938 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
PKD1-202ENST00000415938 BICRAQ9NZM4 1560 aa19.75■□□□□ 0.75
PKD1-202ENST00000415938 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
PKD1-202ENST00000415938 ITGAEP38570 1179 aa19.71■□□□□ 0.75
PKD1-202ENST00000415938 BAZ1BQ9UIG0 1483 aaKnown RBP19.69■□□□□ 0.74
PKD1-202ENST00000415938 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
PKD1-202ENST00000415938 BCANQ96GW7 911 aa19.66■□□□□ 0.74
PKD1-202ENST00000415938 CLIP1P30622 1438 aa19.64■□□□□ 0.73
PKD1-202ENST00000415938 ATAD2BQ9ULI0 1458 aa19.63■□□□□ 0.73
PKD1-202ENST00000415938 SUPT16HQ9Y5B9 1047 aaKnown RBP19.61■□□□□ 0.73
PKD1-202ENST00000415938 EEA1Q15075 1411 aa19.6■□□□□ 0.73
PKD1-202ENST00000415938 ATP1B4Q9UN42 357 aaPredicted RBP19.57■□□□□ 0.72
PKD1-202ENST00000415938 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
PKD1-202ENST00000415938 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
PKD1-202ENST00000415938 KCNH8Q96L42 1107 aa19.47■□□□□ 0.71
PKD1-202ENST00000415938 VPS8Q8N3P4 1428 aa19.46■□□□□ 0.71
PKD1-202ENST00000415938 P3H3Q8IVL6 736 aa19.46■□□□□ 0.71
PKD1-202ENST00000415938 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
PKD1-202ENST00000415938 SYNJ1O43426 1573 aa19.43■□□□□ 0.7
PKD1-202ENST00000415938 TSHZ2Q9NRE2 1034 aa19.42■□□□□ 0.7
PKD1-202ENST00000415938 KANK4Q5T7N3 995 aaPredicted RBP19.4■□□□□ 0.7
PKD1-202ENST00000415938 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
PKD1-202ENST00000415938 DHX57Q6P158 1386 aaKnown RBP19.37■□□□□ 0.69
PKD1-202ENST00000415938 FKBP8Q14318 412 aa19.36■□□□□ 0.69
PKD1-202ENST00000415938 HIRIP3Q9BW71 556 aaPredicted RBP19.34■□□□□ 0.69
PKD1-202ENST00000415938 DDX10Q13206 875 aaKnown RBP19.33■□□□□ 0.69
PKD1-202ENST00000415938 ANP32EQ9BTT0 268 aa19.3■□□□□ 0.68
PKD1-202ENST00000415938 CLSPNQ9HAW4 1339 aa19.28■□□□□ 0.68
PKD1-202ENST00000415938 NEFLP07196 543 aa19.28■□□□□ 0.68
PKD1-202ENST00000415938 TRIM52Q96A61 297 aa19.27■□□□□ 0.68
PKD1-202ENST00000415938 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
PKD1-202ENST00000415938 KIF21BO75037 1637 aa19.23■□□□□ 0.67
PKD1-202ENST00000415938 FAM50AQ14320 339 aaKnown RBP19.21■□□□□ 0.67
PKD1-202ENST00000415938 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
PKD1-202ENST00000415938 SIN3AQ96ST3 1273 aa19.19■□□□□ 0.66
PKD1-202ENST00000415938 KIF27Q86VH2 1401 aa19.15■□□□□ 0.66
PKD1-202ENST00000415938 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
PKD1-202ENST00000415938 CCNB3Q8WWL7 1395 aa19.11■□□□□ 0.65
PKD1-202ENST00000415938 BCL11AQ9H165 835 aa19.11■□□□□ 0.65
PKD1-202ENST00000415938 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
PKD1-202ENST00000415938 IRX6P78412 446 aaPredicted RBP19.09■□□□□ 0.65
PKD1-202ENST00000415938 RAB3GAP2Q9H2M9 1393 aa19.07■□□□□ 0.64
PKD1-202ENST00000415938 CUX1P39880 1505 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms