Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-8A0A0A6YYG3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-8A0A0A6YYG3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-8A0A0A6YYG3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV6-8A0A0A6YYG3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-8A0A0A6YYG3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-8A0A0A6YYG3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV6-8A0A0A6YYG3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-8A0A0A6YYG3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-8A0A0A6YYG3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-8A0A0A6YYG3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.79■□□□□ 0.44
TRBV6-8A0A0A6YYG3 AC108673.1-201ENST00000510422 1159 ntBASIC17.79■□□□□ 0.44
TRBV6-8A0A0A6YYG3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.79■□□□□ 0.44
TRBV6-8A0A0A6YYG3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-8A0A0A6YYG3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-8A0A0A6YYG3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRBV6-8A0A0A6YYG3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-8A0A0A6YYG3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-8A0A0A6YYG3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRBV6-8A0A0A6YYG3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-8A0A0A6YYG3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-8A0A0A6YYG3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV6-8A0A0A6YYG3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV6-8A0A0A6YYG3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV6-8A0A0A6YYG3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV6-8A0A0A6YYG3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV6-8A0A0A6YYG3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-8A0A0A6YYG3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-8A0A0A6YYG3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV6-8A0A0A6YYG3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
TRBV6-8A0A0A6YYG3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-8A0A0A6YYG3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-8A0A0A6YYG3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-8A0A0A6YYG3 AC100797.4-201ENST00000631653 1827 ntBASIC17.75■□□□□ 0.43
TRBV6-8A0A0A6YYG3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-8A0A0A6YYG3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-8A0A0A6YYG3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-8A0A0A6YYG3 MIR3665-201ENST00000578708 105 ntBASIC17.75■□□□□ 0.43
TRBV6-8A0A0A6YYG3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-8A0A0A6YYG3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRBV6-8A0A0A6YYG3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV6-8A0A0A6YYG3 BX255925.1-201ENST00000566954 1854 ntBASIC17.74■□□□□ 0.43
TRBV6-8A0A0A6YYG3 DUX4L28-201ENST00000623687 678 ntBASIC17.74■□□□□ 0.43
TRBV6-8A0A0A6YYG3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-8A0A0A6YYG3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-8A0A0A6YYG3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRBV6-8A0A0A6YYG3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV6-8A0A0A6YYG3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV6-8A0A0A6YYG3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-8A0A0A6YYG3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-8A0A0A6YYG3 AP006261.1-201ENST00000584783 668 ntBASIC17.72■□□□□ 0.43
TRBV6-8A0A0A6YYG3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRBV6-8A0A0A6YYG3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-8A0A0A6YYG3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-8A0A0A6YYG3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV6-8A0A0A6YYG3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-8A0A0A6YYG3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-8A0A0A6YYG3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV6-8A0A0A6YYG3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-8A0A0A6YYG3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-8A0A0A6YYG3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-8A0A0A6YYG3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-8A0A0A6YYG3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-8A0A0A6YYG3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-8A0A0A6YYG3 MIR6090-201ENST00000622481 60 ntBASIC17.7■□□□□ 0.42
TRBV6-8A0A0A6YYG3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-8A0A0A6YYG3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-8A0A0A6YYG3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV6-8A0A0A6YYG3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-8A0A0A6YYG3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-8A0A0A6YYG3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-8A0A0A6YYG3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.69■□□□□ 0.42
TRBV6-8A0A0A6YYG3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-8A0A0A6YYG3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-8A0A0A6YYG3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-8A0A0A6YYG3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-8A0A0A6YYG3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRBV6-8A0A0A6YYG3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRBV6-8A0A0A6YYG3 AC135983.2-203ENST00000454486 1613 ntBASIC17.68■□□□□ 0.42
TRBV6-8A0A0A6YYG3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-8A0A0A6YYG3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-8A0A0A6YYG3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-8A0A0A6YYG3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-8A0A0A6YYG3 LINC01003-201ENST00000564834 1764 ntBASIC17.67■□□□□ 0.42
TRBV6-8A0A0A6YYG3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-8A0A0A6YYG3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.67■□□□□ 0.42
TRBV6-8A0A0A6YYG3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-8A0A0A6YYG3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV6-8A0A0A6YYG3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV6-8A0A0A6YYG3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-8A0A0A6YYG3 AP002414.2-202ENST00000590929 1450 ntBASIC17.66■□□□□ 0.42
TRBV6-8A0A0A6YYG3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-8A0A0A6YYG3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
TRBV6-8A0A0A6YYG3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV6-8A0A0A6YYG3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-8A0A0A6YYG3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-8A0A0A6YYG3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.64■□□□□ 0.41
TRBV6-8A0A0A6YYG3 LINC00273-201ENST00000539813 1452 ntBASIC17.64■□□□□ 0.41
TRBV6-8A0A0A6YYG3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV6-8A0A0A6YYG3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms