Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.93■■□□□ 1.1
TRAV6A0A075B6T7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV6A0A075B6T7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TRAV6A0A075B6T7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRAV6A0A075B6T7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRAV6A0A075B6T7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.92■■□□□ 1.1
TRAV6A0A075B6T7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRAV6A0A075B6T7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAV6A0A075B6T7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAV6A0A075B6T7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.9■■□□□ 1.1
TRAV6A0A075B6T7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.9■■□□□ 1.1
TRAV6A0A075B6T7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRAV6A0A075B6T7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
TRAV6A0A075B6T7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.88■■□□□ 1.09
TRAV6A0A075B6T7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV6A0A075B6T7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV6A0A075B6T7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.87■■□□□ 1.09
TRAV6A0A075B6T7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
TRAV6A0A075B6T7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TRAV6A0A075B6T7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV6A0A075B6T7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV6A0A075B6T7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV6A0A075B6T7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV6A0A075B6T7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TRAV6A0A075B6T7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRAV6A0A075B6T7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRAV6A0A075B6T7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.85■■□□□ 1.09
TRAV6A0A075B6T7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.85■■□□□ 1.09
TRAV6A0A075B6T7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
TRAV6A0A075B6T7 AC020928.2-201ENST00000588717 2197 ntBASIC21.84■■□□□ 1.09
TRAV6A0A075B6T7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.84■■□□□ 1.09
TRAV6A0A075B6T7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRAV6A0A075B6T7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRAV6A0A075B6T7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.84■■□□□ 1.09
TRAV6A0A075B6T7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV6A0A075B6T7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV6A0A075B6T7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV6A0A075B6T7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV6A0A075B6T7 AC091060.1-201ENST00000623524 1766 ntBASIC21.83■■□□□ 1.09
TRAV6A0A075B6T7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.83■■□□□ 1.08
TRAV6A0A075B6T7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV6A0A075B6T7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV6A0A075B6T7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.82■■□□□ 1.08
TRAV6A0A075B6T7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV6A0A075B6T7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV6A0A075B6T7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.82■■□□□ 1.08
TRAV6A0A075B6T7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV6A0A075B6T7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV6A0A075B6T7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV6A0A075B6T7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.81■■□□□ 1.08
TRAV6A0A075B6T7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.81■■□□□ 1.08
TRAV6A0A075B6T7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
TRAV6A0A075B6T7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAV6A0A075B6T7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV6A0A075B6T7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV6A0A075B6T7 LINC01003-201ENST00000564834 1764 ntBASIC21.8■■□□□ 1.08
TRAV6A0A075B6T7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV6A0A075B6T7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV6A0A075B6T7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV6A0A075B6T7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV6A0A075B6T7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV6A0A075B6T7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV6A0A075B6T7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV6A0A075B6T7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV6A0A075B6T7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV6A0A075B6T7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV6A0A075B6T7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.78■■□□□ 1.08
TRAV6A0A075B6T7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV6A0A075B6T7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TRAV6A0A075B6T7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV6A0A075B6T7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.77■■□□□ 1.08
TRAV6A0A075B6T7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
TRAV6A0A075B6T7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 AC093323.1-202ENST00000635031 2045 ntBASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.76■■□□□ 1.07
TRAV6A0A075B6T7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAV6A0A075B6T7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV6A0A075B6T7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV6A0A075B6T7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV6A0A075B6T7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV6A0A075B6T7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
TRAV6A0A075B6T7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV6A0A075B6T7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV6A0A075B6T7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV6A0A075B6T7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRAV6A0A075B6T7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV6A0A075B6T7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TRAV6A0A075B6T7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV6A0A075B6T7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV6A0A075B6T7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TRAV6A0A075B6T7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV6A0A075B6T7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms