Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRAV6A0A075B6T7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
TRAV6A0A075B6T7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.66■■■□□ 2.18
TRAV6A0A075B6T7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
TRAV6A0A075B6T7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TRAV6A0A075B6T7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRAV6A0A075B6T7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TRAV6A0A075B6T7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.68■■■□□ 2.02
TRAV6A0A075B6T7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
TRAV6A0A075B6T7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
TRAV6A0A075B6T7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.57■■■□□ 2
TRAV6A0A075B6T7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.53■■■□□ 2
TRAV6A0A075B6T7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TRAV6A0A075B6T7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.3■■□□□ 1.96
TRAV6A0A075B6T7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
TRAV6A0A075B6T7 AL356512.1-201ENST00000607453 1739 ntBASIC27.04■■□□□ 1.92
TRAV6A0A075B6T7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
TRAV6A0A075B6T7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
TRAV6A0A075B6T7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.9■■□□□ 1.9
TRAV6A0A075B6T7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRAV6A0A075B6T7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRAV6A0A075B6T7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TRAV6A0A075B6T7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRAV6A0A075B6T7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
TRAV6A0A075B6T7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.51■■□□□ 1.83
TRAV6A0A075B6T7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRAV6A0A075B6T7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRAV6A0A075B6T7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRAV6A0A075B6T7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRAV6A0A075B6T7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRAV6A0A075B6T7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRAV6A0A075B6T7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRAV6A0A075B6T7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
TRAV6A0A075B6T7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRAV6A0A075B6T7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRAV6A0A075B6T7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRAV6A0A075B6T7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
TRAV6A0A075B6T7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TRAV6A0A075B6T7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TRAV6A0A075B6T7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TRAV6A0A075B6T7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TRAV6A0A075B6T7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TRAV6A0A075B6T7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
TRAV6A0A075B6T7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRAV6A0A075B6T7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRAV6A0A075B6T7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRAV6A0A075B6T7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
TRAV6A0A075B6T7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
TRAV6A0A075B6T7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.76■■□□□ 1.71
TRAV6A0A075B6T7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
TRAV6A0A075B6T7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
TRAV6A0A075B6T7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRAV6A0A075B6T7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRAV6A0A075B6T7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRAV6A0A075B6T7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRAV6A0A075B6T7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRAV6A0A075B6T7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.57■■□□□ 1.68
TRAV6A0A075B6T7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRAV6A0A075B6T7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.52■■□□□ 1.68
TRAV6A0A075B6T7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.51■■□□□ 1.67
TRAV6A0A075B6T7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.51■■□□□ 1.67
TRAV6A0A075B6T7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRAV6A0A075B6T7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.43■■□□□ 1.66
TRAV6A0A075B6T7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.39■■□□□ 1.65
TRAV6A0A075B6T7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRAV6A0A075B6T7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.34■■□□□ 1.65
TRAV6A0A075B6T7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
TRAV6A0A075B6T7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRAV6A0A075B6T7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.27■■□□□ 1.64
TRAV6A0A075B6T7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.25■■□□□ 1.63
TRAV6A0A075B6T7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRAV6A0A075B6T7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRAV6A0A075B6T7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRAV6A0A075B6T7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.23■■□□□ 1.63
TRAV6A0A075B6T7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRAV6A0A075B6T7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TRAV6A0A075B6T7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRAV6A0A075B6T7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRAV6A0A075B6T7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRAV6A0A075B6T7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRAV6A0A075B6T7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
TRAV6A0A075B6T7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TRAV6A0A075B6T7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
TRAV6A0A075B6T7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRAV6A0A075B6T7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
TRAV6A0A075B6T7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRAV6A0A075B6T7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.11■■□□□ 1.61
TRAV6A0A075B6T7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.08■■□□□ 1.6
TRAV6A0A075B6T7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRAV6A0A075B6T7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.05■■□□□ 1.6
TRAV6A0A075B6T7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.04■■□□□ 1.6
TRAV6A0A075B6T7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRAV6A0A075B6T7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
TRAV6A0A075B6T7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRAV6A0A075B6T7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.99■■□□□ 1.59
TRAV6A0A075B6T7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRAV6A0A075B6T7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
TRAV6A0A075B6T7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
TRAV6A0A075B6T7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TRAV6A0A075B6T7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms