Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 AC004408.2-201ENST00000623613 2777 ntBASIC22.31■■□□□ 1.16
CLIC4Q9Y696 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.31■■□□□ 1.16
CLIC4Q9Y696 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 AC090192.1-201ENST00000517740 490 ntBASIC22.3■■□□□ 1.16
CLIC4Q9Y696 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLIC4Q9Y696 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLIC4Q9Y696 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 AC069152.1-201ENST00000438030 544 ntBASIC22.28■■□□□ 1.16
CLIC4Q9Y696 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLIC4Q9Y696 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 AC142086.2-201ENST00000569753 217 ntBASIC22.27■■□□□ 1.16
CLIC4Q9Y696 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLIC4Q9Y696 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
CLIC4Q9Y696 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.26■■□□□ 1.15
CLIC4Q9Y696 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 AC120498.8-201ENST00000614275 531 ntBASIC22.26■■□□□ 1.15
CLIC4Q9Y696 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms