RNA–Protein interactions for RNA: ENST00000568897.5

LMF1-212, Transcript of lipase maturation factor 1, humanhuman

TSL 5 BASIC

Gene LMF1, Length 1,603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-212ENST00000568897 NISCHQ9Y2I1 1504 aa48.97■■■■■ 5.43
LMF1-212ENST00000568897 CCDC180Q9P1Z9 1646 aa43.59■■■■■ 4.57
LMF1-212ENST00000568897 ABCC9O60706 1549 aa42.55■■■■■ 4.4
LMF1-212ENST00000568897 RB1CC1Q8TDY2 1594 aa41.01■■■■■ 4.15
LMF1-212ENST00000568897 NACADO15069 1562 aa40.99■■■■■ 4.15
LMF1-212ENST00000568897 MYO15BQ96JP2 1530 aa40.81■■■■■ 4.12
LMF1-212ENST00000568897 ZCCHC6Q5VYS8 1495 aaKnown RBP40.8■■■■■ 4.12
LMF1-212ENST00000568897 DCAF8L2P0C7V8 631 aa40.75■■■■■ 4.11
LMF1-212ENST00000568897 DCAF1Q9Y4B6 1507 aa40.6■■■■■ 4.09
LMF1-212ENST00000568897 UNC13AQ9UPW8 1703 aa40.04■■■■■ 4
LMF1-212ENST00000568897 BICRAQ9NZM4 1560 aa39.76■■■■□ 3.96
LMF1-212ENST00000568897 PABPN1Q86U42 306 aaKnown RBP eCLIP39.72■■■■□ 3.95
LMF1-212ENST00000568897 SCRIBQ14160 1630 aa39.65■■■■□ 3.94
LMF1-212ENST00000568897 SHROOM4Q9ULL8 1493 aa39.45■■■■□ 3.91
LMF1-212ENST00000568897 DNAJC5BQ9UF47 199 aa39.07■■■■□ 3.85
LMF1-212ENST00000568897 EIF4G1Q04637 1599 aaKnown RBP38.71■■■■□ 3.79
LMF1-212ENST00000568897 CC2D2AQ9P2K1 1620 aa38.53■■■■□ 3.76
LMF1-212ENST00000568897 CECR2Q9BXF3 1484 aa38.28■■■■□ 3.72
LMF1-212ENST00000568897 SMARCA4P51532 1647 aa37.99■■■■□ 3.67
LMF1-212ENST00000568897 BAZ1AQ9NRL2 1556 aaPredicted RBP37.97■■■■□ 3.67
LMF1-212ENST00000568897 NCAPD3P42695 1498 aa37.82■■■■□ 3.65
LMF1-212ENST00000568897 ATAD2BQ9ULI0 1458 aa37.8■■■■□ 3.64
LMF1-212ENST00000568897 SMARCA2P51531 1590 aa37.77■■■■□ 3.64
LMF1-212ENST00000568897 MROH2BQ7Z745 1585 aa37.7■■■■□ 3.63
LMF1-212ENST00000568897 PEG3Q9GZU2 1588 aa37.7■■■■□ 3.63
LMF1-212ENST00000568897 HMGXB3Q12766 1538 aa37.63■■■■□ 3.62
LMF1-212ENST00000568897 BAZ1BQ9UIG0 1483 aaKnown RBP37.47■■■■□ 3.59
LMF1-212ENST00000568897 RSF1Q96T23 1441 aaPredicted RBP37.28■■■■□ 3.56
LMF1-212ENST00000568897 WIZO95785 1651 aa37.27■■■■□ 3.56
LMF1-212ENST00000568897 TOP2AP11388 1531 aaKnown RBP36.93■■■■□ 3.5
LMF1-212ENST00000568897 LAMC3Q9Y6N6 1575 aa36.81■■■■□ 3.48
LMF1-212ENST00000568897 NESP48681 1621 aa36.81■■■■□ 3.48
LMF1-212ENST00000568897 ERCC6Q03468 1493 aa36.69■■■■□ 3.46
LMF1-212ENST00000568897 CADPSQ9ULU8 1353 aa36.68■■■■□ 3.46
LMF1-212ENST00000568897 PDS5BQ9NTI5 1447 aa36.55■■■■□ 3.44
LMF1-212ENST00000568897 CFTRP13569 1480 aa36.48■■■■□ 3.43
LMF1-212ENST00000568897 CCDC88BA6NC98 1476 aa36.46■■■■□ 3.43
LMF1-212ENST00000568897 KIF21AQ7Z4S6 1674 aa36.4■■■■□ 3.42
LMF1-212ENST00000568897 CUX2O14529 1486 aa36.4■■■■□ 3.42
LMF1-212ENST00000568897 THOC2Q8NI27 1593 aaKnown RBP36.33■■■■□ 3.41
LMF1-212ENST00000568897 FANCD2Q9BXW9 1451 aa36.24■■■■□ 3.39
LMF1-212ENST00000568897 CEP164Q9UPV0 1460 aa36.2■■■■□ 3.39
LMF1-212ENST00000568897 PRDM2Q13029 1718 aa36.19■■■■□ 3.38
LMF1-212ENST00000568897 SUPT5HO00267 1087 aaKnown RBP36.18■■■■□ 3.38
LMF1-212ENST00000568897 MRC2Q9UBG0 1479 aa36.16■■■■□ 3.38
LMF1-212ENST00000568897 WDR62O43379 1518 aa36.07■■■■□ 3.37
LMF1-212ENST00000568897 URB2Q14146 1524 aaKnown RBP35.87■■■■□ 3.33
LMF1-212ENST00000568897 ABCC8Q09428 1581 aa35.72■■■■□ 3.31
LMF1-212ENST00000568897 TOPBP1Q92547 1522 aa35.67■■■■□ 3.3
LMF1-212ENST00000568897 DNMBPQ6XZF7 1577 aa35.63■■■■□ 3.29
LMF1-212ENST00000568897 IFT140Q96RY7 1462 aa35.46■■■■□ 3.27
LMF1-212ENST00000568897 CUX1P39880 1505 aa35.36■■■■□ 3.25
LMF1-212ENST00000568897 POLA1P09884 1462 aaPredicted RBP35.36■■■■□ 3.25
LMF1-212ENST00000568897 TARBP1Q13395 1621 aaKnown RBP35.29■■■■□ 3.24
LMF1-212ENST00000568897 DNAJC5Q9H3Z4 198 aa35.28■■■■□ 3.24
LMF1-212ENST00000568897 ZNF608Q9ULD9 1512 aaPredicted RBP35.25■■■■□ 3.23
LMF1-212ENST00000568897 FGD5Q6ZNL6 1462 aa35.25■■■■□ 3.23
LMF1-212ENST00000568897 SOGA1O94964 1423 aa35.2■■■■□ 3.23
LMF1-212ENST00000568897 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
LMF1-212ENST00000568897 EIF4G3O43432 1585 aaKnown RBP35.14■■■■□ 3.22
LMF1-212ENST00000568897 WRNQ14191 1432 aaPredicted RBP eCLIP35.14■■■■□ 3.223e-6■■■■■ 66.3
LMF1-212ENST00000568897 TOP2BQ02880 1626 aa35.1■■■■□ 3.21
LMF1-212ENST00000568897 BIVM-ERCC5R4GMW8 1640 aa35.09■■■■□ 3.21
LMF1-212ENST00000568897 WDR97A6NE52 1622 aa35.08■■■■□ 3.21
LMF1-212ENST00000568897 AQRO60306 1485 aaKnown RBP eCLIP35.04■■■■□ 3.2
LMF1-212ENST00000568897 SYNJ1O43426 1573 aa35.04■■■■□ 3.2
LMF1-212ENST00000568897 TDRD9Q8NDG6 1382 aaKnown RBP34.97■■■■□ 3.19
LMF1-212ENST00000568897 ABCA10Q8WWZ4 1543 aa34.96■■■■□ 3.19
LMF1-212ENST00000568897 OSCARQ8IYS5 282 aa34.84■■■■□ 3.17
LMF1-212ENST00000568897 GRIN2BQ13224 1484 aa34.82■■■■□ 3.16
LMF1-212ENST00000568897 ABCA5Q8WWZ7 1642 aa34.81■■■■□ 3.16
LMF1-212ENST00000568897 GAPVD1Q14C86 1478 aa34.8■■■■□ 3.16
LMF1-212ENST00000568897 MAGI1Q96QZ7 1491 aaPredicted RBP34.75■■■■□ 3.15
LMF1-212ENST00000568897 SNAPC4Q5SXM2 1469 aa34.73■■■■□ 3.15
LMF1-212ENST00000568897 PBRM1Q86U86 1689 aa34.72■■■■□ 3.15
LMF1-212ENST00000568897 CHD1O14646 1710 aa34.68■■■■□ 3.14
LMF1-212ENST00000568897 SYNJ2O15056 1496 aa34.6■■■■□ 3.13
LMF1-212ENST00000568897 FBLN2P98095 1184 aa34.57■■■■□ 3.12
LMF1-212ENST00000568897 ERICH3Q5RHP9 1530 aa34.55■■■■□ 3.12
LMF1-212ENST00000568897 CHMP7Q8WUX9 453 aaPredicted RBP34.53■■■■□ 3.12
LMF1-212ENST00000568897 ADAMTS12P58397 1594 aa34.46■■■■□ 3.11
LMF1-212ENST00000568897 KIF27Q86VH2 1401 aa34.43■■■■□ 3.1
LMF1-212ENST00000568897 FHAD1B1AJZ9 1412 aa34.42■■■■□ 3.1
LMF1-212ENST00000568897 GRIN2AQ12879 1464 aa34.37■■■■□ 3.09
LMF1-212ENST00000568897 CLASP1Q7Z460 1538 aa34.36■■■■□ 3.09
LMF1-212ENST00000568897 IGF1RP08069 1367 aa34.28■■■■□ 3.08
LMF1-212ENST00000568897 ARHGEF11O15085 1522 aa34.28■■■■□ 3.08
LMF1-212ENST00000568897 RIMBP3CA6NJZ7 1639 aa34.27■■■■□ 3.08
LMF1-212ENST00000568897 RIMBP3BA6NNM3 1639 aa34.27■■■■□ 3.08
LMF1-212ENST00000568897 RIMBP3Q9UFD9 1639 aa34.27■■■■□ 3.08
LMF1-212ENST00000568897 NUP160Q12769 1436 aa34.24■■■■□ 3.07
LMF1-212ENST00000568897 TRIM41Q8WV44 630 aa34.24■■■■□ 3.07
LMF1-212ENST00000568897 CUL7Q14999 1698 aa34.22■■■■□ 3.07
LMF1-212ENST00000568897 CEP170Q5SW79 1584 aa34.18■■■■□ 3.06
LMF1-212ENST00000568897 CARMIL1Q5VZK9 1371 aa34.06■■■■□ 3.04
LMF1-212ENST00000568897 RUSC2Q8N2Y8 1516 aa34.03■■■■□ 3.04
LMF1-212ENST00000568897 SHROOM2Q13796 1616 aa33.99■■■■□ 3.03
LMF1-212ENST00000568897 ARAP1Q96P48 1450 aa33.99■■■■□ 3.03
LMF1-212ENST00000568897 CYB5RLQ6IPT4 315 aa33.9■■■■□ 3.02
LMF1-212ENST00000568897 KIAA0586Q9BVV6 1533 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms