RNA–Protein interactions for RNA: ENST00000349570.11

CDHR5-201, Transcript of cadherin related family member 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDHR5, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR5-201ENST00000349570 NISCHQ9Y2I1 1504 aa40.07■■■■■ 4.01
CDHR5-201ENST00000349570 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
CDHR5-201ENST00000349570 ZCCHC6Q5VYS8 1495 aaKnown RBP33.94■■■■□ 3.02
CDHR5-201ENST00000349570 SHROOM4Q9ULL8 1493 aa33.82■■■■□ 3
CDHR5-201ENST00000349570 SUPT5HO00267 1087 aaKnown RBP33.11■■■□□ 2.89
CDHR5-201ENST00000349570 DCAF1Q9Y4B6 1507 aa33.02■■■□□ 2.88
CDHR5-201ENST00000349570 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
CDHR5-201ENST00000349570 CHIC1Q5VXU3 224 aa32.28■■■□□ 2.76
CDHR5-201ENST00000349570 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
CDHR5-201ENST00000349570 ABCC9O60706 1549 aa32.12■■■□□ 2.73
CDHR5-201ENST00000349570 HRCP23327 699 aa31.96■■■□□ 2.71
CDHR5-201ENST00000349570 SCRIBQ14160 1630 aa31.9■■■□□ 2.7
CDHR5-201ENST00000349570 PELP1Q8IZL8 1130 aaKnown RBP31.65■■■□□ 2.66
CDHR5-201ENST00000349570 NACADO15069 1562 aa31.62■■■□□ 2.65
CDHR5-201ENST00000349570 RSF1Q96T23 1441 aaPredicted RBP31.61■■■□□ 2.65
CDHR5-201ENST00000349570 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
CDHR5-201ENST00000349570 PPARGC1BQ86YN6 1023 aaKnown RBP31.25■■■□□ 2.59
CDHR5-201ENST00000349570 LOC105371045A0A1W2PR82 267 aa31.18■■■□□ 2.58
CDHR5-201ENST00000349570 CECR2Q9BXF3 1484 aa31.13■■■□□ 2.57
CDHR5-201ENST00000349570 PCGF6Q9BYE7 350 aa31.11■■■□□ 2.57
CDHR5-201ENST00000349570 MROH2BQ7Z745 1585 aa31.08■■■□□ 2.57
CDHR5-201ENST00000349570 TRIM41Q8WV44 630 aa30.94■■■□□ 2.54
CDHR5-201ENST00000349570 WIZO95785 1651 aa30.94■■■□□ 2.54
CDHR5-201ENST00000349570 BAZ1AQ9NRL2 1556 aaPredicted RBP30.87■■■□□ 2.53
CDHR5-201ENST00000349570 TRIM26Q12899 539 aaPredicted RBP30.68■■■□□ 2.5
CDHR5-201ENST00000349570 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
CDHR5-201ENST00000349570 EIF4G1Q04637 1599 aaKnown RBP30.64■■■□□ 2.5
CDHR5-201ENST00000349570 MYT1Q01538 1121 aa30.58■■■□□ 2.49
CDHR5-201ENST00000349570 SMARCA4P51532 1647 aa30.57■■■□□ 2.48
CDHR5-201ENST00000349570 SCAF1Q9H7N4 1312 aaKnown RBP30.55■■■□□ 2.48
CDHR5-201ENST00000349570 TOP2AP11388 1531 aaKnown RBP30.55■■■□□ 2.48
CDHR5-201ENST00000349570 FAM9AQ8IZU1 332 aaPredicted RBP30.55■■■□□ 2.48
CDHR5-201ENST00000349570 SMARCA2P51531 1590 aa30.34■■■□□ 2.45
CDHR5-201ENST00000349570 BICRAQ9NZM4 1560 aa30.31■■■□□ 2.44
CDHR5-201ENST00000349570 CCDC88BA6NC98 1476 aa30.3■■■□□ 2.44
CDHR5-201ENST00000349570 PABPN1Q86U42 306 aaKnown RBP eCLIP30.23■■■□□ 2.43
CDHR5-201ENST00000349570 EHMT2Q96KQ7 1210 aa30.18■■■□□ 2.42
CDHR5-201ENST00000349570 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
CDHR5-201ENST00000349570 PEG3Q9GZU2 1588 aa30.06■■■□□ 2.4
CDHR5-201ENST00000349570 ZEB1P37275 1124 aaPredicted RBP30.05■■■□□ 2.4
CDHR5-201ENST00000349570 EEA1Q15075 1411 aa29.87■■■□□ 2.37
CDHR5-201ENST00000349570 SOGA1O94964 1423 aa29.83■■■□□ 2.37
CDHR5-201ENST00000349570 WRNQ14191 1432 aaPredicted RBP eCLIP29.77■■■□□ 2.362e-46■■■■■ 32.2
CDHR5-201ENST00000349570 CEP162Q5TB80 1403 aa29.73■■■□□ 2.35
CDHR5-201ENST00000349570 ATAD2BQ9ULI0 1458 aa29.73■■■□□ 2.35
CDHR5-201ENST00000349570 TNIKQ9UKE5 1360 aa29.72■■■□□ 2.35
CDHR5-201ENST00000349570 RUSC2Q8N2Y8 1516 aa29.67■■■□□ 2.34
CDHR5-201ENST00000349570 BAZ1BQ9UIG0 1483 aaKnown RBP29.66■■■□□ 2.34
CDHR5-201ENST00000349570 CSRNP3Q8WYN3 585 aa29.65■■■□□ 2.34
CDHR5-201ENST00000349570 ACIN1Q9UKV3 1341 aaKnown RBP29.62■■■□□ 2.33
CDHR5-201ENST00000349570 SYNJ1O43426 1573 aa29.61■■■□□ 2.33
CDHR5-201ENST00000349570 GOLGA3Q08378 1498 aa29.6■■■□□ 2.33
CDHR5-201ENST00000349570 NEUROD1Q13562 356 aa29.51■■■□□ 2.31
CDHR5-201ENST00000349570 KIF21BO75037 1637 aa29.49■■■□□ 2.31
CDHR5-201ENST00000349570 CEP164Q9UPV0 1460 aa29.45■■■□□ 2.31
CDHR5-201ENST00000349570 UBTFP17480 764 aaKnown RBP29.45■■■□□ 2.3
CDHR5-201ENST00000349570 GTF3C3Q9Y5Q9 886 aa29.38■■■□□ 2.29
CDHR5-201ENST00000349570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.34■■■□□ 2.29
CDHR5-201ENST00000349570 CCER1Q8TC90 406 aaPredicted RBP29.31■■■□□ 2.28
CDHR5-201ENST00000349570 TOP2BQ02880 1626 aa29.31■■■□□ 2.28
CDHR5-201ENST00000349570 HMGXB3Q12766 1538 aa29.28■■■□□ 2.28
CDHR5-201ENST00000349570 BIVM-ERCC5R4GMW8 1640 aa29.26■■■□□ 2.27
CDHR5-201ENST00000349570 TTBK1Q5TCY1 1321 aaPredicted RBP29.24■■■□□ 2.27
CDHR5-201ENST00000349570 CLIP1P30622 1438 aa29.19■■■□□ 2.26
CDHR5-201ENST00000349570 NCAPD3P42695 1498 aa29.19■■■□□ 2.26
CDHR5-201ENST00000349570 RAPGEF2Q9Y4G8 1499 aa29.15■■■□□ 2.26
CDHR5-201ENST00000349570 VPS8Q8N3P4 1428 aa29.11■■■□□ 2.25
CDHR5-201ENST00000349570 CENPBP07199 599 aaPredicted RBP29.09■■■□□ 2.25
CDHR5-201ENST00000349570 CC2D2AQ9P2K1 1620 aa29.07■■■□□ 2.24
CDHR5-201ENST00000349570 ERICH3Q5RHP9 1530 aa29.03■■■□□ 2.24
CDHR5-201ENST00000349570 CUX1P39880 1505 aa28.97■■■□□ 2.23
CDHR5-201ENST00000349570 PRXQ9BXM0 1461 aa28.95■■■□□ 2.23
CDHR5-201ENST00000349570 CFTRP13569 1480 aa28.93■■■□□ 2.22
CDHR5-201ENST00000349570 PRDM2Q13029 1718 aa28.89■■■□□ 2.22
CDHR5-201ENST00000349570 APLP2Q06481 763 aa28.83■■■□□ 2.21
CDHR5-201ENST00000349570 KIF27Q86VH2 1401 aa28.82■■■□□ 2.2
CDHR5-201ENST00000349570 DIEXFQ68CQ4 756 aaKnown RBP28.78■■■□□ 2.2
CDHR5-201ENST00000349570 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
CDHR5-201ENST00000349570 RANGAP1P46060 587 aaPredicted RBP28.72■■■□□ 2.19
CDHR5-201ENST00000349570 HNRNPUL2Q1KMD3 747 aaKnown RBP28.71■■■□□ 2.19
CDHR5-201ENST00000349570 CADPSQ9ULU8 1353 aa28.57■■■□□ 2.16
CDHR5-201ENST00000349570 ZNF316A6NFI3 1004 aaPredicted RBP28.57■■■□□ 2.16
CDHR5-201ENST00000349570 BCL11AQ9H165 835 aa28.55■■■□□ 2.16
CDHR5-201ENST00000349570 ARHGAP35Q9NRY4 1499 aa28.53■■■□□ 2.16
CDHR5-201ENST00000349570 CUX2O14529 1486 aa28.52■■■□□ 2.16
CDHR5-201ENST00000349570 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
CDHR5-201ENST00000349570 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
CDHR5-201ENST00000349570 RRBP1Q9P2E9 1410 aaKnown RBP28.44■■■□□ 2.14
CDHR5-201ENST00000349570 IGF1RP08069 1367 aa28.44■■■□□ 2.14
CDHR5-201ENST00000349570 KANK4Q5T7N3 995 aaPredicted RBP28.43■■■□□ 2.14
CDHR5-201ENST00000349570 CLSPNQ9HAW4 1339 aa28.36■■■□□ 2.13
CDHR5-201ENST00000349570 CARMIL1Q5VZK9 1371 aa28.33■■■□□ 2.13
CDHR5-201ENST00000349570 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
CDHR5-201ENST00000349570 DHX57Q6P158 1386 aaKnown RBP28.31■■■□□ 2.12
CDHR5-201ENST00000349570 YTHDC1Q96MU7 727 aaKnown RBP28.31■■■□□ 2.12
CDHR5-201ENST00000349570 MAP3K1Q13233 1512 aa28.29■■■□□ 2.12
CDHR5-201ENST00000349570 TIAM1Q13009 1591 aa28.27■■■□□ 2.12
CDHR5-201ENST00000349570 DNMBPQ6XZF7 1577 aa28.27■■■□□ 2.12
CDHR5-201ENST00000349570 CCNB3Q8WWL7 1395 aa28.26■■■□□ 2.11
CDHR5-201ENST00000349570 ANP32EQ9BTT0 268 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms