RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 NISCHQ9Y2I1 1504 aa50.25■■■■■ 5.63
CUEDC2-201ENST00000369937 CCDC180Q9P1Z9 1646 aa44.92■■■■■ 4.78
CUEDC2-201ENST00000369937 ABCC9O60706 1549 aa44.6■■■■■ 4.73
CUEDC2-201ENST00000369937 RB1CC1Q8TDY2 1594 aa42.64■■■■■ 4.42
CUEDC2-201ENST00000369937 DCAF8L2P0C7V8 631 aa42.45■■■■■ 4.39
CUEDC2-201ENST00000369937 NACADO15069 1562 aa42.42■■■■■ 4.38
CUEDC2-201ENST00000369937 MYO15BQ96JP2 1530 aa41.92■■■■■ 4.3
CUEDC2-201ENST00000369937 ZCCHC6Q5VYS8 1495 aaKnown RBP41.7■■■■■ 4.27
CUEDC2-201ENST00000369937 PABPN1Q86U42 306 aaKnown RBP eCLIP41.62■■■■■ 4.25
CUEDC2-201ENST00000369937 UNC13AQ9UPW8 1703 aa41.55■■■■■ 4.24
CUEDC2-201ENST00000369937 DCAF1Q9Y4B6 1507 aa41.52■■■■■ 4.24
CUEDC2-201ENST00000369937 DNAJC5BQ9UF47 199 aa41.42■■■■■ 4.22
CUEDC2-201ENST00000369937 BICRAQ9NZM4 1560 aa41.25■■■■■ 4.19
CUEDC2-201ENST00000369937 SCRIBQ14160 1630 aa40.99■■■■■ 4.15
CUEDC2-201ENST00000369937 SHROOM4Q9ULL8 1493 aa40.83■■■■■ 4.13
CUEDC2-201ENST00000369937 EIF4G1Q04637 1599 aaKnown RBP40.29■■■■■ 4.04
CUEDC2-201ENST00000369937 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
CUEDC2-201ENST00000369937 CECR2Q9BXF3 1484 aa40.14■■■■■ 4.02
CUEDC2-201ENST00000369937 NCAPD3P42695 1498 aa39.13■■■■□ 3.85
CUEDC2-201ENST00000369937 SMARCA4P51532 1647 aa39.11■■■■□ 3.85
CUEDC2-201ENST00000369937 ATAD2BQ9ULI0 1458 aa39.06■■■■□ 3.84
CUEDC2-201ENST00000369937 BAZ1AQ9NRL2 1556 aaPredicted RBP39.03■■■■□ 3.84
CUEDC2-201ENST00000369937 SMARCA2P51531 1590 aa39.02■■■■□ 3.84
CUEDC2-201ENST00000369937 HMGXB3Q12766 1538 aa38.87■■■■□ 3.81
CUEDC2-201ENST00000369937 BAZ1BQ9UIG0 1483 aaKnown RBP38.77■■■■□ 3.8
CUEDC2-201ENST00000369937 MROH2BQ7Z745 1585 aa38.7■■■■□ 3.79
CUEDC2-201ENST00000369937 PEG3Q9GZU2 1588 aa38.7■■■■□ 3.79
CUEDC2-201ENST00000369937 ERCC6Q03468 1493 aa38.57■■■■□ 3.76
CUEDC2-201ENST00000369937 NESP48681 1621 aa38.38■■■■□ 3.73
CUEDC2-201ENST00000369937 CUX2O14529 1486 aa38.29■■■■□ 3.72
CUEDC2-201ENST00000369937 WIZO95785 1651 aa38.27■■■■□ 3.72
CUEDC2-201ENST00000369937 LAMC3Q9Y6N6 1575 aa38.22■■■■□ 3.71
CUEDC2-201ENST00000369937 RSF1Q96T23 1441 aaPredicted RBP38.06■■■■□ 3.68
CUEDC2-201ENST00000369937 PDS5BQ9NTI5 1447 aa38.04■■■■□ 3.68
CUEDC2-201ENST00000369937 CADPSQ9ULU8 1353 aa38■■■■□ 3.67
CUEDC2-201ENST00000369937 KIF21AQ7Z4S6 1674 aa37.89■■■■□ 3.66
CUEDC2-201ENST00000369937 THOC2Q8NI27 1593 aaKnown RBP37.88■■■■□ 3.65
CUEDC2-201ENST00000369937 DNAJC5Q9H3Z4 198 aa37.85■■■■□ 3.65
CUEDC2-201ENST00000369937 TOP2AP11388 1531 aaKnown RBP37.83■■■■□ 3.65
CUEDC2-201ENST00000369937 MRC2Q9UBG0 1479 aa37.64■■■■□ 3.62
CUEDC2-201ENST00000369937 CFTRP13569 1480 aa37.61■■■■□ 3.61
CUEDC2-201ENST00000369937 CEP164Q9UPV0 1460 aa37.59■■■■□ 3.61
CUEDC2-201ENST00000369937 FANCD2Q9BXW9 1451 aa37.57■■■■□ 3.6
CUEDC2-201ENST00000369937 WDR62O43379 1518 aa37.49■■■■□ 3.59
CUEDC2-201ENST00000369937 CCDC88BA6NC98 1476 aa37.4■■■■□ 3.58
CUEDC2-201ENST00000369937 PRDM2Q13029 1718 aa37.24■■■■□ 3.55
CUEDC2-201ENST00000369937 URB2Q14146 1524 aaKnown RBP37.17■■■■□ 3.54
CUEDC2-201ENST00000369937 ABCC8Q09428 1581 aa36.9■■■■□ 3.5
CUEDC2-201ENST00000369937 TOPBP1Q92547 1522 aa36.87■■■■□ 3.49
CUEDC2-201ENST00000369937 IFT140Q96RY7 1462 aa36.82■■■■□ 3.49
CUEDC2-201ENST00000369937 SUPT5HO00267 1087 aaKnown RBP36.8■■■■□ 3.48
CUEDC2-201ENST00000369937 DNMBPQ6XZF7 1577 aa36.78■■■■□ 3.48
CUEDC2-201ENST00000369937 OSCARQ8IYS5 282 aa36.69■■■■□ 3.46
CUEDC2-201ENST00000369937 ZNF608Q9ULD9 1512 aaPredicted RBP36.66■■■■□ 3.46
CUEDC2-201ENST00000369937 POLA1P09884 1462 aaPredicted RBP36.51■■■■□ 3.44
CUEDC2-201ENST00000369937 EIF4G3O43432 1585 aaKnown RBP36.49■■■■□ 3.43
CUEDC2-201ENST00000369937 TARBP1Q13395 1621 aaKnown RBP36.47■■■■□ 3.43
CUEDC2-201ENST00000369937 TRIM41Q8WV44 630 aa36.44■■■■□ 3.42
CUEDC2-201ENST00000369937 AQRO60306 1485 aaKnown RBP eCLIP36.42■■■■□ 3.42
CUEDC2-201ENST00000369937 SOGA1O94964 1423 aa36.42■■■■□ 3.42
CUEDC2-201ENST00000369937 RAD54L2Q9Y4B4 1467 aa36.38■■■■□ 3.41
CUEDC2-201ENST00000369937 FGD5Q6ZNL6 1462 aa36.36■■■■□ 3.41
CUEDC2-201ENST00000369937 CUX1P39880 1505 aa36.34■■■■□ 3.41
CUEDC2-201ENST00000369937 TDRD9Q8NDG6 1382 aaKnown RBP36.28■■■■□ 3.4
CUEDC2-201ENST00000369937 FBLN2P98095 1184 aa36.24■■■■□ 3.39
CUEDC2-201ENST00000369937 WDR97A6NE52 1622 aa36.19■■■■□ 3.38
CUEDC2-201ENST00000369937 CHD1O14646 1710 aa36.14■■■■□ 3.38
CUEDC2-201ENST00000369937 SNAPC4Q5SXM2 1469 aa36.06■■■■□ 3.36
CUEDC2-201ENST00000369937 RIMBP3CA6NJZ7 1639 aa36.05■■■■□ 3.36
CUEDC2-201ENST00000369937 RIMBP3BA6NNM3 1639 aa36.05■■■■□ 3.36
CUEDC2-201ENST00000369937 RIMBP3Q9UFD9 1639 aa36.05■■■■□ 3.36
CUEDC2-201ENST00000369937 GRIN2BQ13224 1484 aa36.05■■■■□ 3.36
CUEDC2-201ENST00000369937 CHMP7Q8WUX9 453 aaPredicted RBP36.02■■■■□ 3.36
CUEDC2-201ENST00000369937 MAGI1Q96QZ7 1491 aaPredicted RBP35.99■■■■□ 3.35
CUEDC2-201ENST00000369937 ARHGEF11O15085 1522 aa35.99■■■■□ 3.35
CUEDC2-201ENST00000369937 GAPVD1Q14C86 1478 aa35.97■■■■□ 3.35
CUEDC2-201ENST00000369937 WRNQ14191 1432 aaPredicted RBP eCLIP35.96■■■■□ 3.35
CUEDC2-201ENST00000369937 ABCA10Q8WWZ4 1543 aa35.95■■■■□ 3.35
CUEDC2-201ENST00000369937 TOP2BQ02880 1626 aa35.89■■■■□ 3.34
CUEDC2-201ENST00000369937 PBRM1Q86U86 1689 aa35.88■■■■□ 3.33
CUEDC2-201ENST00000369937 SYNJ2O15056 1496 aa35.87■■■■□ 3.33
CUEDC2-201ENST00000369937 BIVM-ERCC5R4GMW8 1640 aa35.87■■■■□ 3.33
CUEDC2-201ENST00000369937 SYNJ1O43426 1573 aa35.83■■■■□ 3.33
CUEDC2-201ENST00000369937 ABCA5Q8WWZ7 1642 aa35.83■■■■□ 3.33
CUEDC2-201ENST00000369937 CYB5RLQ6IPT4 315 aa35.8■■■■□ 3.32
CUEDC2-201ENST00000369937 CLASP1Q7Z460 1538 aa35.72■■■■□ 3.31
CUEDC2-201ENST00000369937 ARAP1Q96P48 1450 aa35.64■■■■□ 3.3
CUEDC2-201ENST00000369937 GRIN2AQ12879 1464 aa35.56■■■■□ 3.28
CUEDC2-201ENST00000369937 ADAMTS12P58397 1594 aa35.55■■■■□ 3.28
CUEDC2-201ENST00000369937 FHAD1B1AJZ9 1412 aa35.53■■■■□ 3.28
CUEDC2-201ENST00000369937 ERICH3Q5RHP9 1530 aa35.52■■■■□ 3.28
CUEDC2-201ENST00000369937 NUP160Q12769 1436 aa35.39■■■■□ 3.26
CUEDC2-201ENST00000369937 CEP170Q5SW79 1584 aa35.37■■■■□ 3.25
CUEDC2-201ENST00000369937 TRHP20396 242 aaPredicted RBP35.36■■■■□ 3.25
CUEDC2-201ENST00000369937 KIF27Q86VH2 1401 aa35.28■■■■□ 3.24
CUEDC2-201ENST00000369937 SHROOM2Q13796 1616 aa35.17■■■■□ 3.22
CUEDC2-201ENST00000369937 ERCC6L2Q5T890 1561 aa35.17■■■■□ 3.22
CUEDC2-201ENST00000369937 IGF1RP08069 1367 aa35.16■■■■□ 3.22
CUEDC2-201ENST00000369937 JPH4Q96JJ6 628 aa35.12■■■■□ 3.21
CUEDC2-201ENST00000369937 CUL7Q14999 1698 aa35.1■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms