RNA–Protein interactions for RNA: ENST00000623613.1

AC004408.2-201, humanhuman

BASIC

Gene AC004408.2, Length 2,777 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004408.2-201ENST00000623613 NISCHQ9Y2I1 1504 aa38.8■■■■□ 3.8
AC004408.2-201ENST00000623613 SHROOM4Q9ULL8 1493 aa33.45■■■□□ 2.95
AC004408.2-201ENST00000623613 SUPT5HO00267 1087 aaKnown RBP32.98■■■□□ 2.87
AC004408.2-201ENST00000623613 ZCCHC6Q5VYS8 1495 aaKnown RBP32.85■■■□□ 2.85
AC004408.2-201ENST00000623613 CCDC180Q9P1Z9 1646 aa32.74■■■□□ 2.83
AC004408.2-201ENST00000623613 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
AC004408.2-201ENST00000623613 CHIC1Q5VXU3 224 aa32.14■■■□□ 2.74
AC004408.2-201ENST00000623613 MYO15BQ96JP2 1530 aa32.02■■■□□ 2.72
AC004408.2-201ENST00000623613 DCAF1Q9Y4B6 1507 aa31.76■■■□□ 2.67
AC004408.2-201ENST00000623613 HRCP23327 699 aa31.63■■■□□ 2.65
AC004408.2-201ENST00000623613 PCGF6Q9BYE7 350 aa31.49■■■□□ 2.63
AC004408.2-201ENST00000623613 LOC105371045A0A1W2PR82 267 aa31.26■■■□□ 2.6
AC004408.2-201ENST00000623613 ABCC9O60706 1549 aa31.02■■■□□ 2.56
AC004408.2-201ENST00000623613 PPARGC1BQ86YN6 1023 aaKnown RBP30.98■■■□□ 2.55
AC004408.2-201ENST00000623613 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
AC004408.2-201ENST00000623613 RSF1Q96T23 1441 aaPredicted RBP30.86■■■□□ 2.53
AC004408.2-201ENST00000623613 TRIM26Q12899 539 aaPredicted RBP30.78■■■□□ 2.52
AC004408.2-201ENST00000623613 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
AC004408.2-201ENST00000623613 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
AC004408.2-201ENST00000623613 FAM9AQ8IZU1 332 aaPredicted RBP30.49■■■□□ 2.47
AC004408.2-201ENST00000623613 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
AC004408.2-201ENST00000623613 NACADO15069 1562 aa30.28■■■□□ 2.44
AC004408.2-201ENST00000623613 EHMT2Q96KQ7 1210 aa30.26■■■□□ 2.44
AC004408.2-201ENST00000623613 ZEB1P37275 1124 aaPredicted RBP30.22■■■□□ 2.43
AC004408.2-201ENST00000623613 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
AC004408.2-201ENST00000623613 WIZO95785 1651 aa30.05■■■□□ 2.4
AC004408.2-201ENST00000623613 BAZ1AQ9NRL2 1556 aaPredicted RBP29.83■■■□□ 2.37
AC004408.2-201ENST00000623613 EIF4G1Q04637 1599 aaKnown RBP29.67■■■□□ 2.34
AC004408.2-201ENST00000623613 TOP2AP11388 1531 aaKnown RBP29.54■■■□□ 2.32
AC004408.2-201ENST00000623613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.53■■■□□ 2.32
AC004408.2-201ENST00000623613 ABCC8Q09428 1581 aa29.51■■■□□ 2.31
AC004408.2-201ENST00000623613 CCDC88BA6NC98 1476 aa29.5■■■□□ 2.31
AC004408.2-201ENST00000623613 CCER1Q8TC90 406 aaPredicted RBP29.48■■■□□ 2.31
AC004408.2-201ENST00000623613 SMARCA4P51532 1647 aa29.46■■■□□ 2.31
AC004408.2-201ENST00000623613 SMARCA2P51531 1590 aa29.4■■■□□ 2.3
AC004408.2-201ENST00000623613 TTBK1Q5TCY1 1321 aaPredicted RBP29.35■■■□□ 2.29
AC004408.2-201ENST00000623613 SOGA1O94964 1423 aa29.33■■■□□ 2.29
AC004408.2-201ENST00000623613 SCAF1Q9H7N4 1312 aaKnown RBP29.32■■■□□ 2.28
AC004408.2-201ENST00000623613 CEP162Q5TB80 1403 aa29.31■■■□□ 2.28
AC004408.2-201ENST00000623613 WRNQ14191 1432 aaPredicted RBP eCLIP29.31■■■□□ 2.28
AC004408.2-201ENST00000623613 UNC13AQ9UPW8 1703 aa29.25■■■□□ 2.27
AC004408.2-201ENST00000623613 TNIKQ9UKE5 1360 aa29.25■■■□□ 2.27
AC004408.2-201ENST00000623613 CSRNP3Q8WYN3 585 aa29.24■■■□□ 2.27
AC004408.2-201ENST00000623613 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.27
AC004408.2-201ENST00000623613 RUSC2Q8N2Y8 1516 aa29.17■■■□□ 2.26
AC004408.2-201ENST00000623613 EEA1Q15075 1411 aa29.17■■■□□ 2.26
AC004408.2-201ENST00000623613 PABPN1Q86U42 306 aaKnown RBP eCLIP29.11■■■□□ 2.25
AC004408.2-201ENST00000623613 DIEXFQ68CQ4 756 aaKnown RBP29.04■■■□□ 2.24
AC004408.2-201ENST00000623613 PELP1Q8IZL8 1130 aaKnown RBP29.01■■■□□ 2.23
AC004408.2-201ENST00000623613 GOLGA3Q08378 1498 aa29■■■□□ 2.23
AC004408.2-201ENST00000623613 ACIN1Q9UKV3 1341 aaKnown RBP28.97■■■□□ 2.23
AC004408.2-201ENST00000623613 BICRAQ9NZM4 1560 aa28.91■■■□□ 2.22
AC004408.2-201ENST00000623613 NEUROD1Q13562 356 aa28.91■■■□□ 2.22
AC004408.2-201ENST00000623613 PEG3Q9GZU2 1588 aa28.83■■■□□ 2.21
AC004408.2-201ENST00000623613 CEP164Q9UPV0 1460 aa28.81■■■□□ 2.2
AC004408.2-201ENST00000623613 SYNJ1O43426 1573 aa28.78■■■□□ 2.2
AC004408.2-201ENST00000623613 CENPBP07199 599 aaPredicted RBP28.78■■■□□ 2.2
AC004408.2-201ENST00000623613 ZNF316A6NFI3 1004 aaPredicted RBP28.75■■■□□ 2.19
AC004408.2-201ENST00000623613 HNRNPUL2Q1KMD3 747 aaKnown RBP28.73■■■□□ 2.19
AC004408.2-201ENST00000623613 CLIP1P30622 1438 aa28.72■■■□□ 2.19
AC004408.2-201ENST00000623613 KIF21BO75037 1637 aa28.71■■■□□ 2.19
AC004408.2-201ENST00000623613 ATAD2BQ9ULI0 1458 aa28.69■■■□□ 2.18
AC004408.2-201ENST00000623613 GTF3C3Q9Y5Q9 886 aa28.67■■■□□ 2.18
AC004408.2-201ENST00000623613 BAZ1BQ9UIG0 1483 aaKnown RBP28.64■■■□□ 2.18
AC004408.2-201ENST00000623613 APLP2Q06481 763 aa28.62■■■□□ 2.17
AC004408.2-201ENST00000623613 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
AC004408.2-201ENST00000623613 RANGAP1P46060 587 aaPredicted RBP28.6■■■□□ 2.17
AC004408.2-201ENST00000623613 RAPGEF2Q9Y4G8 1499 aa28.58■■■□□ 2.17
AC004408.2-201ENST00000623613 YTHDC1Q96MU7 727 aaKnown RBP28.41■■■□□ 2.14
AC004408.2-201ENST00000623613 TOP2BQ02880 1626 aa28.39■■■□□ 2.13
AC004408.2-201ENST00000623613 MIER1Q8N108 512 aa28.38■■■□□ 2.13
AC004408.2-201ENST00000623613 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
AC004408.2-201ENST00000623613 PRXQ9BXM0 1461 aa28.23■■■□□ 2.11
AC004408.2-201ENST00000623613 ERICH3Q5RHP9 1530 aa28.21■■■□□ 2.11
AC004408.2-201ENST00000623613 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
AC004408.2-201ENST00000623613 KANK4Q5T7N3 995 aaPredicted RBP28.17■■■□□ 2.1
AC004408.2-201ENST00000623613 DHX57Q6P158 1386 aaKnown RBP28.11■■■□□ 2.09
AC004408.2-201ENST00000623613 CLSPNQ9HAW4 1339 aa28.11■■■□□ 2.09
AC004408.2-201ENST00000623613 CUX1P39880 1505 aa28.08■■■□□ 2.09
AC004408.2-201ENST00000623613 KIF27Q86VH2 1401 aa28.07■■■□□ 2.08
AC004408.2-201ENST00000623613 NCAPD3P42695 1498 aa28.06■■■□□ 2.08
AC004408.2-201ENST00000623613 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
AC004408.2-201ENST00000623613 RRBP1Q9P2E9 1410 aaKnown RBP27.96■■■□□ 2.07
AC004408.2-201ENST00000623613 CFTRP13569 1480 aa27.92■■■□□ 2.06
AC004408.2-201ENST00000623613 ARHGAP35Q9NRY4 1499 aa27.9■■■□□ 2.06
AC004408.2-201ENST00000623613 ITGAEP38570 1179 aa27.88■■■□□ 2.05
AC004408.2-201ENST00000623613 CCNB3Q8WWL7 1395 aa27.88■■■□□ 2.05
AC004408.2-201ENST00000623613 CUX2O14529 1486 aa27.8■■■□□ 2.04
AC004408.2-201ENST00000623613 IGF1RP08069 1367 aa27.77■■■□□ 2.04
AC004408.2-201ENST00000623613 RAB3GAP2Q9H2M9 1393 aa27.68■■■□□ 2.02
AC004408.2-201ENST00000623613 CARMIL1Q5VZK9 1371 aa27.66■■■□□ 2.02
AC004408.2-201ENST00000623613 TIAM1Q13009 1591 aa27.61■■■□□ 2.01
AC004408.2-201ENST00000623613 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
AC004408.2-201ENST00000623613 MAP3K1Q13233 1512 aa27.58■■■□□ 2.01
AC004408.2-201ENST00000623613 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
AC004408.2-201ENST00000623613 MYT1Q01538 1121 aa27.58■■■□□ 2.01
AC004408.2-201ENST00000623613 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
AC004408.2-201ENST00000623613 SETD5Q9C0A6 1442 aa27.55■■■□□ 2
AC004408.2-201ENST00000623613 LRRC9Q6ZRR7 1453 aa27.55■■■□□ 2
AC004408.2-201ENST00000623613 FAM50AQ14320 339 aaKnown RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms