Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 HSPA9-211ENST00000512328 482 ntTSL 33.76□□□□□ -1.813e-7■■□□□ 13.1
SRSF1Q07955 HSPA9-202ENST00000501917 275 ntTSL 33.52□□□□□ -1.853e-7■■□□□ 13.1
SRSF1Q07955 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.68■■□□□ 1.064e-8■■□□□ 13.1
SRSF1Q07955 HMGA2-208ENST00000537429 1527 ntTSL 1 (best)21.28■■□□□ 14e-8■■□□□ 13.1
SRSF1Q07955 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.28■■□□□ 14e-8■■□□□ 13.1
SRSF1Q07955 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.744e-8■■□□□ 13.1
SRSF1Q07955 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.04■□□□□ 0.484e-8■■□□□ 13.1
SRSF1Q07955 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.314e-8■■□□□ 13.1
SRSF1Q07955 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.624e-8■■□□□ 13.1
SRSF1Q07955 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.753e-6■■□□□ 13.1
SRSF1Q07955 TULP4-207ENST00000620026 680 ntTSL 419.83■□□□□ 0.775e-14■■□□□ 13.1
SRSF1Q07955 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.231e-6■■□□□ 13.1
SRSF1Q07955 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.33□□□□□ -0.271e-6■■□□□ 13.1
SRSF1Q07955 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.73■■□□□ 1.872e-6■■□□□ 13
SRSF1Q07955 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.852e-6■■□□□ 13
SRSF1Q07955 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.06■■□□□ 1.282e-6■■□□□ 13
SRSF1Q07955 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.31■■□□□ 1.162e-6■■□□□ 13
SRSF1Q07955 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.29■■□□□ 1.162e-6■■□□□ 13
SRSF1Q07955 DVL3-205ENST00000462665 668 ntTSL 521.38■■□□□ 1.012e-6■■□□□ 13
SRSF1Q07955 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 12e-6■■□□□ 13
SRSF1Q07955 PLEC-211ENST00000527303 598 ntTSL 321.24■□□□□ 0.992e-6■■□□□ 13
SRSF1Q07955 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.93■□□□□ 0.782e-6■■□□□ 13
SRSF1Q07955 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.662e-6■■□□□ 13
SRSF1Q07955 DVL3-202ENST00000423300 1099 ntTSL 519.14■□□□□ 0.652e-6■■□□□ 13
SRSF1Q07955 BCL2L2-205ENST00000557236 631 ntTSL 519.07■□□□□ 0.648e-8■■□□□ 13
SRSF1Q07955 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.582e-6■■□□□ 13
SRSF1Q07955 DVL3-206ENST00000467873 617 ntTSL 318.39■□□□□ 0.532e-6■■□□□ 13
SRSF1Q07955 PIEZO1-203ENST00000419505 1635 ntTSL 1 (best)17.75■□□□□ 0.431e-7■■□□□ 13
SRSF1Q07955 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.7■□□□□ 0.421e-7■■□□□ 13
SRSF1Q07955 AKAP8L-209ENST00000595879 790 ntTSL 316.79■□□□□ 0.282e-7■■□□□ 13
SRSF1Q07955 BCL2L2-204ENST00000556599 548 ntTSL 316.54■□□□□ 0.242e-6■■□□□ 13
SRSF1Q07955 MIIP-207ENST00000498685 1392 ntTSL 216.38■□□□□ 0.212e-6■■□□□ 13
SRSF1Q07955 AKAP8L-212ENST00000596750 906 ntTSL 316.08■□□□□ 0.162e-7■■□□□ 13
SRSF1Q07955 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.69■□□□□ 0.12e-6■■□□□ 13
SRSF1Q07955 MAP3K4-213ENST00000542952 629 ntTSL 415.21■□□□□ 0.032e-6■■□□□ 13
SRSF1Q07955 MIIP-203ENST00000466860 1709 ntTSL 515.16■□□□□ 0.022e-6■■□□□ 13
SRSF1Q07955 DVL3-207ENST00000478247 2272 ntTSL 514.93□□□□□ -0.022e-6■■□□□ 13
SRSF1Q07955 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.87□□□□□ -0.032e-6■■□□□ 13
SRSF1Q07955 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.032e-6■■□□□ 13
SRSF1Q07955 NOL4L-208ENST00000475781 1127 ntTSL 514.79□□□□□ -0.042e-6■■□□□ 13
SRSF1Q07955 MIIP-205ENST00000478749 779 ntTSL 214.73□□□□□ -0.052e-6■■□□□ 13
SRSF1Q07955 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.142e-6■■□□□ 13
SRSF1Q07955 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.142e-6■■□□□ 13
SRSF1Q07955 BCL2L2-206ENST00000557579 596 ntTSL 314.15□□□□□ -0.148e-8■■□□□ 13
SRSF1Q07955 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14□□□□□ -0.171e-6■■□□□ 13
SRSF1Q07955 POLG-210ENST00000532363 445 ntTSL 213.94□□□□□ -0.182e-6■■□□□ 13
SRSF1Q07955 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.89□□□□□ -0.192e-6■■□□□ 13
SRSF1Q07955 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.85□□□□□ -0.192e-6■■□□□ 13
SRSF1Q07955 PIEZO1-208ENST00000484567 2464 ntTSL 213.74□□□□□ -0.211e-7■■□□□ 13
SRSF1Q07955 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.235e-6■■□□□ 13
SRSF1Q07955 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.282e-6■■□□□ 13
SRSF1Q07955 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.372e-6■■□□□ 13
SRSF1Q07955 BCL2L2-PABPN1-202ENST00000556100 655 ntTSL 312.49□□□□□ -0.418e-8■■□□□ 13
SRSF1Q07955 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.432e-6■■□□□ 13
SRSF1Q07955 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.52e-6■■□□□ 13
SRSF1Q07955 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.542e-6■■□□□ 13
SRSF1Q07955 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.571e-6■■□□□ 13
SRSF1Q07955 MAP3K4-215ENST00000544041 5444 ntTSL 1 (best)11.29□□□□□ -0.62e-6■■□□□ 13
SRSF1Q07955 MAP3K4-207ENST00000490904 5451 ntTSL 1 (best)11.22□□□□□ -0.612e-6■■□□□ 13
SRSF1Q07955 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.642e-6■■□□□ 13
SRSF1Q07955 RTL8C-203ENST00000495563 578 ntTSL 510.93□□□□□ -0.662e-6■■□□□ 13
SRSF1Q07955 NOL4L-204ENST00000375677 541 ntTSL 310.83□□□□□ -0.682e-6■■□□□ 13
SRSF1Q07955 MAP3K4-212ENST00000542851 625 ntTSL 210.82□□□□□ -0.682e-6■■□□□ 13
SRSF1Q07955 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC10.23□□□□□ -0.772e-6■■□□□ 13
SRSF1Q07955 MAN2A2-220ENST00000560192 2469 ntTSL 1 (best)10.19□□□□□ -0.785e-6■■□□□ 13
SRSF1Q07955 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.788e-8■■□□□ 13
SRSF1Q07955 GAB3-201ENST00000369568 3704 ntAPPRIS ALT2 TSL 210.09□□□□□ -0.792e-6■■□□□ 13
SRSF1Q07955 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.95e-6■■□□□ 13
SRSF1Q07955 RTL8C-202ENST00000464369 616 ntTSL 59.35□□□□□ -0.912e-6■■□□□ 13
SRSF1Q07955 ZSWIM8-203ENST00000425051 594 ntTSL 59.16□□□□□ -0.942e-6■■□□□ 13
SRSF1Q07955 TFPI-207ENST00000421427 804 ntTSL 39.07□□□□□ -0.962e-6■■□□□ 13
SRSF1Q07955 POLR2A-209ENST00000617998 6751 ntTSL 1 (best)8.53□□□□□ -1.042e-6■■□□□ 13
SRSF1Q07955 KIF2C-202ENST00000372224 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.092e-6■■□□□ 13
SRSF1Q07955 DDX55-208ENST00000541259 460 ntTSL 38.17□□□□□ -1.12e-6■■□□□ 13
SRSF1Q07955 ZSWIM8-211ENST00000489234 681 ntTSL 58.06□□□□□ -1.122e-6■■□□□ 13
SRSF1Q07955 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC7.38□□□□□ -1.232e-6■■□□□ 13
SRSF1Q07955 KIF2C-206ENST00000472235 480 ntTSL 27.23□□□□□ -1.252e-6■■□□□ 13
SRSF1Q07955 GAB3-202ENST00000369575 4718 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.292e-6■■□□□ 13
SRSF1Q07955 TRRAP-205ENST00000456197 11654 ntAPPRIS ALT2 TSL 1 (best)6.61□□□□□ -1.352e-6■■□□□ 13
SRSF1Q07955 TFPI-206ENST00000420747 685 ntTSL 36.44□□□□□ -1.382e-6■■□□□ 13
SRSF1Q07955 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.42e-6■■□□□ 13
SRSF1Q07955 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.42e-6■■□□□ 13
SRSF1Q07955 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.432e-6■■□□□ 13
SRSF1Q07955 NPM1-205ENST00000518587 670 ntTSL 26.08□□□□□ -1.443e-8■■□□□ 13
SRSF1Q07955 NPM1-211ENST00000523622 247 ntTSL 35.9□□□□□ -1.463e-8■■□□□ 13
SRSF1Q07955 HOXB3-213ENST00000552000 466 ntTSL 35.68□□□□□ -1.52e-6■■□□□ 13
SRSF1Q07955 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.46□□□□□ -1.542e-6■■□□□ 13
SRSF1Q07955 TFPI-210ENST00000453013 733 ntTSL 25.45□□□□□ -1.542e-6■■□□□ 13
SRSF1Q07955 TFPI-211ENST00000481132 7690 ntTSL 25.32□□□□□ -1.562e-6■■□□□ 13
SRSF1Q07955 GAB3-206ENST00000496390 4240 ntTSL 1 (best)5.23□□□□□ -1.572e-6■■□□□ 13
SRSF1Q07955 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.2□□□□□ -1.582e-6■■□□□ 13
SRSF1Q07955 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.612e-6■■□□□ 13
SRSF1Q07955 TFPI-209ENST00000437725 545 ntTSL 44.79□□□□□ -1.642e-6■■□□□ 13
SRSF1Q07955 HOXB3-203ENST00000464266 595 ntTSL 34.72□□□□□ -1.652e-6■■□□□ 13
SRSF1Q07955 TFPI-205ENST00000417013 554 ntTSL 24.51□□□□□ -1.692e-6■■□□□ 13
SRSF1Q07955 NPM1-210ENST00000523339 268 ntTSL 24.16□□□□□ -1.743e-8■■□□□ 13
SRSF1Q07955 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.862e-6■■□□□ 13
SRSF1Q07955 GGA1-220ENST00000484804 449 ntTSL 314.79□□□□□ -0.042e-6■■□□□ 13
SRSF1Q07955 MED15-225ENST00000477824 571 ntTSL 519.47■□□□□ 0.715e-8■■□□□ 13
SRSF1Q07955 MED15-210ENST00000432052 598 ntTSL 419.46■□□□□ 0.715e-8■■□□□ 13
Retrieved 100 of 14,836 protein–RNA pairs in 113.7 ms