RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
HOXB3-203ENST00000464266 AEBP2Q6ZN18 517 aaPredicted RBP16.55■□□□□ 0.24
HOXB3-203ENST00000464266 PHF23Q9BUL5 403 aaPredicted RBP15.03■□□□□ -0
HOXB3-203ENST00000464266 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
HOXB3-203ENST00000464266 SENP3Q9H4L4 574 aaPredicted RBP13.94□□□□□ -0.18
HOXB3-203ENST00000464266 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
HOXB3-203ENST00000464266 KCNA4P22459 653 aa13.27□□□□□ -0.29
HOXB3-203ENST00000464266 ADRA2BP18089 450 aa13.26□□□□□ -0.29
HOXB3-203ENST00000464266 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
HOXB3-203ENST00000464266 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
HOXB3-203ENST00000464266 FOXD1Q16676 465 aa12.82□□□□□ -0.36
HOXB3-203ENST00000464266 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
HOXB3-203ENST00000464266 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
HOXB3-203ENST00000464266 NCBP3Q53F19 620 aaKnown RBP12.55□□□□□ -0.4
HOXB3-203ENST00000464266 NPM3O75607 178 aaKnown RBP12.33□□□□□ -0.44
HOXB3-203ENST00000464266 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
HOXB3-203ENST00000464266 SLC24A1O60721 1099 aa12.26□□□□□ -0.45
HOXB3-203ENST00000464266 ZBTB22O15209 634 aa12.2□□□□□ -0.46
HOXB3-203ENST00000464266 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
HOXB3-203ENST00000464266 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
HOXB3-203ENST00000464266 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
HOXB3-203ENST00000464266 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
HOXB3-203ENST00000464266 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
HOXB3-203ENST00000464266 DNAJC5BQ9UF47 199 aa11.8□□□□□ -0.52
HOXB3-203ENST00000464266 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
HOXB3-203ENST00000464266 FKBP8Q14318 412 aa11.59□□□□□ -0.55
HOXB3-203ENST00000464266 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
HOXB3-203ENST00000464266 MSH5O43196 834 aa11.51□□□□□ -0.57
HOXB3-203ENST00000464266 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
HOXB3-203ENST00000464266 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
HOXB3-203ENST00000464266 MYCNP04198 464 aaPredicted RBP11.39□□□□□ -0.59
HOXB3-203ENST00000464266 HOXD11P31277 338 aaPredicted RBP11.34□□□□□ -0.59
HOXB3-203ENST00000464266 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
HOXB3-203ENST00000464266 PLCB2Q00722 1185 aa11.06□□□□□ -0.64
HOXB3-203ENST00000464266 ATF5Q9Y2D1 282 aaPredicted RBP11□□□□□ -0.65
HOXB3-203ENST00000464266 FBXO3Q9UK99 471 aa10.95□□□□□ -0.66
HOXB3-203ENST00000464266 HAP1P54257 671 aaPredicted RBP10.94□□□□□ -0.66
HOXB3-203ENST00000464266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.93□□□□□ -0.66
HOXB3-203ENST00000464266 HNRNPUL2Q1KMD3 747 aaKnown RBP10.93□□□□□ -0.66
HOXB3-203ENST00000464266 SAMD1Q6SPF0 538 aaPredicted RBP10.92□□□□□ -0.66
HOXB3-203ENST00000464266 BCANQ96GW7 911 aa10.9□□□□□ -0.66
HOXB3-203ENST00000464266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.86□□□□□ -0.67
HOXB3-203ENST00000464266 DCAF8L2P0C7V8 631 aa10.85□□□□□ -0.67
HOXB3-203ENST00000464266 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
HOXB3-203ENST00000464266 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
HOXB3-203ENST00000464266 SPDYE4A6NLX3 237 aa10.77□□□□□ -0.69
HOXB3-203ENST00000464266 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
HOXB3-203ENST00000464266 TAOK2Q9UL54 1235 aa10.77□□□□□ -0.69
HOXB3-203ENST00000464266 VASPP50552 380 aaPredicted RBP10.76□□□□□ -0.69
HOXB3-203ENST00000464266 ZNF219Q9P2Y4 722 aaPredicted RBP10.74□□□□□ -0.69
HOXB3-203ENST00000464266 U3KPZ7 1027 aaPredicted RBP10.74□□□□□ -0.69
HOXB3-203ENST00000464266 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
HOXB3-203ENST00000464266 PROM2Q8N271 834 aa10.66□□□□□ -0.7
HOXB3-203ENST00000464266 PKD2Q13563 968 aa10.63□□□□□ -0.71
HOXB3-203ENST00000464266 APLP2Q06481 763 aa10.62□□□□□ -0.71
HOXB3-203ENST00000464266 TPRNQ4KMQ1 711 aa10.61□□□□□ -0.71
HOXB3-203ENST00000464266 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
HOXB3-203ENST00000464266 MKRN4PQ13434 485 aaPredicted RBP10.57□□□□□ -0.72
HOXB3-203ENST00000464266 BBXQ8WY36 941 aaPredicted RBP10.55□□□□□ -0.72
HOXB3-203ENST00000464266 KDM2AQ9Y2K7 1162 aa10.54□□□□□ -0.72
HOXB3-203ENST00000464266 FBLN2P98095 1184 aa10.53□□□□□ -0.72
HOXB3-203ENST00000464266 PAXIP1Q6ZW49 1069 aaPredicted RBP10.51□□□□□ -0.73
HOXB3-203ENST00000464266 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
HOXB3-203ENST00000464266 ECM2O94769 699 aaPredicted RBP10.45□□□□□ -0.74
HOXB3-203ENST00000464266 KLHL34Q8N239 644 aa10.43□□□□□ -0.74
HOXB3-203ENST00000464266 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
HOXB3-203ENST00000464266 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
HOXB3-203ENST00000464266 SPRYD3Q8NCJ5 442 aa10.38□□□□□ -0.75
HOXB3-203ENST00000464266 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
HOXB3-203ENST00000464266 POLA2Q14181 598 aa10.31□□□□□ -0.76
HOXB3-203ENST00000464266 RGL2O15211 777 aa10.3□□□□□ -0.76
HOXB3-203ENST00000464266 TRHP20396 242 aaPredicted RBP10.3□□□□□ -0.76
HOXB3-203ENST00000464266 NBR1Q14596 966 aa10.28□□□□□ -0.76
HOXB3-203ENST00000464266 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
HOXB3-203ENST00000464266 STAG3Q9UJ98 1225 aa10.24□□□□□ -0.77
HOXB3-203ENST00000464266 CHGAP10645 457 aaKnown RBP10.22□□□□□ -0.77
HOXB3-203ENST00000464266 ZBTB12Q9Y330 459 aaPredicted RBP10.22□□□□□ -0.77
HOXB3-203ENST00000464266 SPINK5Q9NQ38 1064 aaPredicted RBP10.2□□□□□ -0.78
HOXB3-203ENST00000464266 TIMELESSQ9UNS1 1208 aa10.2□□□□□ -0.78
HOXB3-203ENST00000464266 TULP1O00294 542 aaPredicted RBP10.18□□□□□ -0.78
HOXB3-203ENST00000464266 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
HOXB3-203ENST00000464266 CAPN15O75808 1086 aa10.16□□□□□ -0.78
HOXB3-203ENST00000464266 MIER1Q8N108 512 aa10.15□□□□□ -0.78
HOXB3-203ENST00000464266 CIZ1Q9ULV3 898 aaPredicted RBP10.14□□□□□ -0.79
HOXB3-203ENST00000464266 GTF3C3Q9Y5Q9 886 aa10.14□□□□□ -0.79
HOXB3-203ENST00000464266 ERICH6Q7L0X2 663 aa10.11□□□□□ -0.79
HOXB3-203ENST00000464266 ZNF692Q9BU19 519 aaPredicted RBP10.11□□□□□ -0.79
HOXB3-203ENST00000464266 HS6ST3Q8IZP7 471 aa10.07□□□□□ -0.8
HOXB3-203ENST00000464266 TRIM41Q8WV44 630 aa10.06□□□□□ -0.8
HOXB3-203ENST00000464266 ARXQ96QS3 562 aa10.06□□□□□ -0.8
HOXB3-203ENST00000464266 PLEKHG5O94827 1062 aa10.05□□□□□ -0.8
HOXB3-203ENST00000464266 ZBTB47Q9UFB7 747 aaPredicted RBP10.05□□□□□ -0.8
HOXB3-203ENST00000464266 ABCB7O75027 752 aa10.03□□□□□ -0.8
HOXB3-203ENST00000464266 SPDYE2BA6NHP3 402 aa10□□□□□ -0.81
HOXB3-203ENST00000464266 SPDYE6P0CI01 402 aa10□□□□□ -0.81
HOXB3-203ENST00000464266 SPDYE2Q495Y8 402 aa10□□□□□ -0.81
HOXB3-203ENST00000464266 PABPN1Q86U42 306 aaKnown RBP eCLIP9.99□□□□□ -0.81
HOXB3-203ENST00000464266 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
HOXB3-203ENST00000464266 SSUH2Q9Y2M2 353 aa9.98□□□□□ -0.81
HOXB3-203ENST00000464266 TMEM132AQ24JP5 1023 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms