RNA–Protein interactions for RNA: ENST00000544041.5

MAP3K4-215, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 1 (best)

Gene MAP3K4, Length 5,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-215ENST00000544041 NISCHQ9Y2I1 1504 aa22.89■■□□□ 1.25
MAP3K4-215ENST00000544041 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
MAP3K4-215ENST00000544041 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
MAP3K4-215ENST00000544041 SHROOM4Q9ULL8 1493 aa21.95■■□□□ 1.1
MAP3K4-215ENST00000544041 PELP1Q8IZL8 1130 aaKnown RBP21.65■■□□□ 1.06
MAP3K4-215ENST00000544041 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
MAP3K4-215ENST00000544041 ZEB1P37275 1124 aaPredicted RBP21.37■■□□□ 1.01
MAP3K4-215ENST00000544041 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
MAP3K4-215ENST00000544041 CENPBP07199 599 aaPredicted RBP21.23■□□□□ 0.99
MAP3K4-215ENST00000544041 MYT1Q01538 1121 aa21.17■□□□□ 0.98
MAP3K4-215ENST00000544041 APLP2Q06481 763 aa21.04■□□□□ 0.96
MAP3K4-215ENST00000544041 HRCP23327 699 aa21.04■□□□□ 0.96
MAP3K4-215ENST00000544041 FAM9AQ8IZU1 332 aaPredicted RBP21.03■□□□□ 0.96
MAP3K4-215ENST00000544041 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
MAP3K4-215ENST00000544041 TRIM41Q8WV44 630 aa20.83■□□□□ 0.92
MAP3K4-215ENST00000544041 TRIM26Q12899 539 aaPredicted RBP20.78■□□□□ 0.92
MAP3K4-215ENST00000544041 TTBK1Q5TCY1 1321 aaPredicted RBP20.74■□□□□ 0.91
MAP3K4-215ENST00000544041 ERICH6Q7L0X2 663 aa20.62■□□□□ 0.89
MAP3K4-215ENST00000544041 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
MAP3K4-215ENST00000544041 YTHDC1Q96MU7 727 aaKnown RBP20.49■□□□□ 0.87
MAP3K4-215ENST00000544041 NEFLP07196 543 aa20.41■□□□□ 0.86
MAP3K4-215ENST00000544041 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
MAP3K4-215ENST00000544041 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
MAP3K4-215ENST00000544041 LOC105371045A0A1W2PR82 267 aa20.32■□□□□ 0.84
MAP3K4-215ENST00000544041 RANGAP1P46060 587 aaPredicted RBP20.23■□□□□ 0.83
MAP3K4-215ENST00000544041 DIEXFQ68CQ4 756 aaKnown RBP20.07■□□□□ 0.8
MAP3K4-215ENST00000544041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.95■□□□□ 0.78
MAP3K4-215ENST00000544041 ATP1B4Q9UN42 357 aaPredicted RBP19.94■□□□□ 0.78
MAP3K4-215ENST00000544041 GTF3C3Q9Y5Q9 886 aa19.88■□□□□ 0.77
MAP3K4-215ENST00000544041 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
MAP3K4-215ENST00000544041 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
MAP3K4-215ENST00000544041 ITGAEP38570 1179 aa19.66■□□□□ 0.74
MAP3K4-215ENST00000544041 ZNF316A6NFI3 1004 aaPredicted RBP19.61■□□□□ 0.73
MAP3K4-215ENST00000544041 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
MAP3K4-215ENST00000544041 DAXXQ9UER7 740 aaPredicted RBP19.59■□□□□ 0.73
MAP3K4-215ENST00000544041 RTL5Q5HYW3 569 aaPredicted RBP19.51■□□□□ 0.71
MAP3K4-215ENST00000544041 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
MAP3K4-215ENST00000544041 BCANQ96GW7 911 aa19.38■□□□□ 0.69
MAP3K4-215ENST00000544041 POLR3GLQ9BT43 218 aa19.36■□□□□ 0.69
MAP3K4-215ENST00000544041 CDK11AQ9UQ88 783 aaPredicted RBP19.33■□□□□ 0.68
MAP3K4-215ENST00000544041 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
MAP3K4-215ENST00000544041 ANP32CO43423 234 aa19.3■□□□□ 0.68
MAP3K4-215ENST00000544041 NEUROD1Q13562 356 aa19.28■□□□□ 0.68
MAP3K4-215ENST00000544041 FAM50AQ14320 339 aaKnown RBP19.22■□□□□ 0.67
MAP3K4-215ENST00000544041 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
MAP3K4-215ENST00000544041 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
MAP3K4-215ENST00000544041 ZCCHC6Q5VYS8 1495 aaKnown RBP19.1■□□□□ 0.65
MAP3K4-215ENST00000544041 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
MAP3K4-215ENST00000544041 TRIM52Q96A61 297 aa19.02■□□□□ 0.64
MAP3K4-215ENST00000544041 FKBP8Q14318 412 aa19.02■□□□□ 0.64
MAP3K4-215ENST00000544041 MYT1LQ9UL68 1186 aa19.01■□□□□ 0.63
MAP3K4-215ENST00000544041 ANP32AP39687 249 aaKnown RBP18.98■□□□□ 0.63
MAP3K4-215ENST00000544041 CCDC180Q9P1Z9 1646 aa18.96■□□□□ 0.63
MAP3K4-215ENST00000544041 MIER1Q8N108 512 aa18.91■□□□□ 0.62
MAP3K4-215ENST00000544041 DDX10Q13206 875 aaKnown RBP18.79■□□□□ 0.6
MAP3K4-215ENST00000544041 ABCC9O60706 1549 aa18.79■□□□□ 0.6
MAP3K4-215ENST00000544041 HNRNPUQ00839 825 aaKnown RBP eCLIP18.78■□□□□ 0.6
MAP3K4-215ENST00000544041 ZNF326Q5BKZ1 582 aaKnown RBP18.75■□□□□ 0.59
MAP3K4-215ENST00000544041 TONSLQ96HA7 1378 aa18.75■□□□□ 0.59
MAP3K4-215ENST00000544041 ANP32EQ9BTT0 268 aa18.72■□□□□ 0.59
MAP3K4-215ENST00000544041 PABPN1Q86U42 306 aaKnown RBP eCLIP18.71■□□□□ 0.59
MAP3K4-215ENST00000544041 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
MAP3K4-215ENST00000544041 NPM2Q86SE8 214 aaKnown RBP18.69■□□□□ 0.58
MAP3K4-215ENST00000544041 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
MAP3K4-215ENST00000544041 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
MAP3K4-215ENST00000544041 EIF5BO60841 1220 aaKnown RBP18.6■□□□□ 0.57
MAP3K4-215ENST00000544041 P3H3Q8IVL6 736 aa18.59■□□□□ 0.57
MAP3K4-215ENST00000544041 FAM9BQ8IZU0 186 aa18.59■□□□□ 0.57
MAP3K4-215ENST00000544041 CCDC136Q96JN2 1154 aa18.59■□□□□ 0.57
MAP3K4-215ENST00000544041 CANXP27824 592 aaKnown RBP18.58■□□□□ 0.57
MAP3K4-215ENST00000544041 EEA1Q15075 1411 aa18.58■□□□□ 0.57
MAP3K4-215ENST00000544041 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
MAP3K4-215ENST00000544041 CLIP1P30622 1438 aa18.57■□□□□ 0.56
MAP3K4-215ENST00000544041 NBR1Q14596 966 aa18.56■□□□□ 0.56
MAP3K4-215ENST00000544041 RSF1Q96T23 1441 aaPredicted RBP18.52■□□□□ 0.55
MAP3K4-215ENST00000544041 GOLGA3Q08378 1498 aa18.48■□□□□ 0.55
MAP3K4-215ENST00000544041 MRS2Q9HD23 443 aa18.48■□□□□ 0.55
MAP3K4-215ENST00000544041 SUPT16HQ9Y5B9 1047 aaKnown RBP18.48■□□□□ 0.55
MAP3K4-215ENST00000544041 GLIPR1L2Q4G1C9 344 aa18.48■□□□□ 0.55
MAP3K4-215ENST00000544041 TNIKQ9UKE5 1360 aa18.47■□□□□ 0.55
MAP3K4-215ENST00000544041 IRX6P78412 446 aaPredicted RBP18.44■□□□□ 0.54
MAP3K4-215ENST00000544041 TMC1Q8TDI8 760 aa18.42■□□□□ 0.54
MAP3K4-215ENST00000544041 UPF2Q9HAU5 1272 aaKnown RBP18.42■□□□□ 0.54
MAP3K4-215ENST00000544041 ANP32BQ92688 251 aaKnown RBP18.4■□□□□ 0.54
MAP3K4-215ENST00000544041 EIF4G2P78344 907 aaKnown RBP eCLIP18.36■□□□□ 0.53
MAP3K4-215ENST00000544041 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
MAP3K4-215ENST00000544041 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.34■□□□□ 0.53
MAP3K4-215ENST00000544041 NEFMP07197 916 aa18.31■□□□□ 0.52
MAP3K4-215ENST00000544041 DDRGK1Q96HY6 314 aa18.3■□□□□ 0.52
MAP3K4-215ENST00000544041 ARID3CA6NKF2 412 aa18.29■□□□□ 0.52
MAP3K4-215ENST00000544041 PPP4R2Q9NY27 417 aa18.29■□□□□ 0.52
MAP3K4-215ENST00000544041 ZNF777Q9ULD5 760 aaPredicted RBP18.28■□□□□ 0.52
MAP3K4-215ENST00000544041 BCL11AQ9H165 835 aa18.28■□□□□ 0.52
MAP3K4-215ENST00000544041 SALL2Q9Y467 1007 aaPredicted RBP18.28■□□□□ 0.52
MAP3K4-215ENST00000544041 CEP164Q9UPV0 1460 aa18.28■□□□□ 0.52
MAP3K4-215ENST00000544041 HSP90AA1P07900 732 aaKnown RBP18.27■□□□□ 0.52
MAP3K4-215ENST00000544041 RB1CC1Q8TDY2 1594 aa18.26■□□□□ 0.51
MAP3K4-215ENST00000544041 MTUS2Q5JR59 1369 aa18.26■□□□□ 0.51
MAP3K4-215ENST00000544041 CHIC2Q9UKJ5 165 aa18.24■□□□□ 0.51
MAP3K4-215ENST00000544041 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms