Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 AC012317.2-201ENST00000623305 2251 ntBASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 LINC00554-201ENST00000564841 3011 ntBASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CDC42SE1Q9NRR8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 PCDH8P1-201ENST00000428983 2773 ntBASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 AL365209.1-201ENST00000624418 6473 ntBASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
CDC42SE1Q9NRR8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms