Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH16O75309 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDH16O75309 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CDH16O75309 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH16O75309 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.78■□□□□ 0.76
CDH16O75309 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.78■□□□□ 0.76
CDH16O75309 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH16O75309 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.78■□□□□ 0.76
CDH16O75309 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
CDH16O75309 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CDH16O75309 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDH16O75309 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDH16O75309 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CDH16O75309 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDH16O75309 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH16O75309 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH16O75309 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH16O75309 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH16O75309 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CDH16O75309 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH16O75309 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH16O75309 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDH16O75309 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH16O75309 AC007613.1-201ENST00000572811 2597 ntBASIC19.77■□□□□ 0.76
CDH16O75309 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH16O75309 AC026271.2-201ENST00000428091 497 ntBASIC19.77■□□□□ 0.76
CDH16O75309 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.77■□□□□ 0.76
CDH16O75309 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.77■□□□□ 0.76
CDH16O75309 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CDH16O75309 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CDH16O75309 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH16O75309 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH16O75309 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDH16O75309 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.77■□□□□ 0.75
CDH16O75309 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH16O75309 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CDH16O75309 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH16O75309 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDH16O75309 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH16O75309 AC006333.2-201ENST00000607957 2099 ntBASIC19.76■□□□□ 0.75
CDH16O75309 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDH16O75309 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDH16O75309 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 AC079598.2-202ENST00000546624 1451 ntBASIC19.76■□□□□ 0.75
CDH16O75309 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH16O75309 TERF1P5-201ENST00000477545 1207 ntBASIC19.76■□□□□ 0.75
CDH16O75309 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.76■□□□□ 0.75
CDH16O75309 KRT18P14-201ENST00000534205 1250 ntBASIC19.76■□□□□ 0.75
CDH16O75309 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH16O75309 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDH16O75309 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH16O75309 AL049812.1-201ENST00000432563 2267 ntBASIC19.76■□□□□ 0.75
CDH16O75309 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDH16O75309 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDH16O75309 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDH16O75309 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDH16O75309 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH16O75309 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH16O75309 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDH16O75309 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH16O75309 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CDH16O75309 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms