RNA–Protein interactions for RNA: ENST00000485769.5

PBX1-209, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-209ENST00000485769 NISCHQ9Y2I1 1504 aa49.62■■■■■ 5.53
PBX1-209ENST00000485769 CCDC180Q9P1Z9 1646 aa44.06■■■■■ 4.64
PBX1-209ENST00000485769 ABCC9O60706 1549 aa42.87■■■■■ 4.45
PBX1-209ENST00000485769 DCAF8L2P0C7V8 631 aa41.43■■■■■ 4.22
PBX1-209ENST00000485769 NACADO15069 1562 aa41.42■■■■■ 4.22
PBX1-209ENST00000485769 RB1CC1Q8TDY2 1594 aa41.41■■■■■ 4.22
PBX1-209ENST00000485769 ZCCHC6Q5VYS8 1495 aaKnown RBP41.35■■■■■ 4.21
PBX1-209ENST00000485769 MYO15BQ96JP2 1530 aa41.25■■■■■ 4.19
PBX1-209ENST00000485769 DCAF1Q9Y4B6 1507 aa41.12■■■■■ 4.17
PBX1-209ENST00000485769 UNC13AQ9UPW8 1703 aa40.3■■■■■ 4.04
PBX1-209ENST00000485769 SCRIBQ14160 1630 aa40.13■■■■■ 4.02
PBX1-209ENST00000485769 PABPN1Q86U42 306 aaKnown RBP eCLIP40.09■■■■■ 4.01
PBX1-209ENST00000485769 BICRAQ9NZM4 1560 aa40.01■■■■■ 4
PBX1-209ENST00000485769 SHROOM4Q9ULL8 1493 aa39.81■■■■□ 3.96
PBX1-209ENST00000485769 DNAJC5BQ9UF47 199 aa39.1■■■■□ 3.85
PBX1-209ENST00000485769 EIF4G1Q04637 1599 aaKnown RBP39■■■■□ 3.83
PBX1-209ENST00000485769 CC2D2AQ9P2K1 1620 aa38.78■■■■□ 3.8
PBX1-209ENST00000485769 CECR2Q9BXF3 1484 aa38.55■■■■□ 3.76
PBX1-209ENST00000485769 BAZ1AQ9NRL2 1556 aaPredicted RBP38.49■■■■□ 3.75
PBX1-209ENST00000485769 SMARCA4P51532 1647 aa38.44■■■■□ 3.74
PBX1-209ENST00000485769 SMARCA2P51531 1590 aa38.23■■■■□ 3.71
PBX1-209ENST00000485769 ATAD2BQ9ULI0 1458 aa38.2■■■■□ 3.71
PBX1-209ENST00000485769 NCAPD3P42695 1498 aa38.19■■■■□ 3.7
PBX1-209ENST00000485769 MROH2BQ7Z745 1585 aa38.19■■■■□ 3.7
PBX1-209ENST00000485769 PEG3Q9GZU2 1588 aa38.09■■■■□ 3.69
PBX1-209ENST00000485769 HMGXB3Q12766 1538 aa38.01■■■■□ 3.67
PBX1-209ENST00000485769 BAZ1BQ9UIG0 1483 aaKnown RBP37.93■■■■□ 3.66
PBX1-209ENST00000485769 RSF1Q96T23 1441 aaPredicted RBP37.86■■■■□ 3.65
PBX1-209ENST00000485769 WIZO95785 1651 aa37.77■■■■□ 3.64
PBX1-209ENST00000485769 TOP2AP11388 1531 aaKnown RBP37.46■■■■□ 3.59
PBX1-209ENST00000485769 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
PBX1-209ENST00000485769 CADPSQ9ULU8 1353 aa37.1■■■■□ 3.53
PBX1-209ENST00000485769 NESP48681 1621 aa37.1■■■■□ 3.53
PBX1-209ENST00000485769 SUPT5HO00267 1087 aaKnown RBP37.08■■■■□ 3.53
PBX1-209ENST00000485769 ERCC6Q03468 1493 aa37.02■■■■□ 3.52
PBX1-209ENST00000485769 CCDC88BA6NC98 1476 aa37■■■■□ 3.51
PBX1-209ENST00000485769 PDS5BQ9NTI5 1447 aa36.95■■■■□ 3.51
PBX1-209ENST00000485769 CFTRP13569 1480 aa36.89■■■■□ 3.5
PBX1-209ENST00000485769 KIF21AQ7Z4S6 1674 aa36.67■■■■□ 3.46
PBX1-209ENST00000485769 FANCD2Q9BXW9 1451 aa36.64■■■■□ 3.46
PBX1-209ENST00000485769 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
PBX1-209ENST00000485769 PRDM2Q13029 1718 aa36.6■■■■□ 3.45
PBX1-209ENST00000485769 CUX2O14529 1486 aa36.56■■■■□ 3.44
PBX1-209ENST00000485769 THOC2Q8NI27 1593 aaKnown RBP36.52■■■■□ 3.44
PBX1-209ENST00000485769 MRC2Q9UBG0 1479 aa36.5■■■■□ 3.43
PBX1-209ENST00000485769 WDR62O43379 1518 aa36.34■■■■□ 3.41
PBX1-209ENST00000485769 URB2Q14146 1524 aaKnown RBP36.21■■■■□ 3.39
PBX1-209ENST00000485769 ABCC8Q09428 1581 aa36.2■■■■□ 3.39
PBX1-209ENST00000485769 TOPBP1Q92547 1522 aa36.06■■■■□ 3.36
PBX1-209ENST00000485769 DNMBPQ6XZF7 1577 aa36.06■■■■□ 3.36
PBX1-209ENST00000485769 IFT140Q96RY7 1462 aa35.85■■■■□ 3.33
PBX1-209ENST00000485769 CUX1P39880 1505 aa35.83■■■■□ 3.33
PBX1-209ENST00000485769 POLA1P09884 1462 aaPredicted RBP35.76■■■■□ 3.32
PBX1-209ENST00000485769 WRNQ14191 1432 aaPredicted RBP eCLIP35.74■■■■□ 3.31
PBX1-209ENST00000485769 FGD5Q6ZNL6 1462 aa35.71■■■■□ 3.31
PBX1-209ENST00000485769 SOGA1O94964 1423 aa35.67■■■■□ 3.3
PBX1-209ENST00000485769 TARBP1Q13395 1621 aaKnown RBP35.62■■■■□ 3.29
PBX1-209ENST00000485769 TOP2BQ02880 1626 aa35.61■■■■□ 3.29
PBX1-209ENST00000485769 BIVM-ERCC5R4GMW8 1640 aa35.59■■■■□ 3.29
PBX1-209ENST00000485769 RAD54L2Q9Y4B4 1467 aa35.57■■■■□ 3.28
PBX1-209ENST00000485769 ZNF608Q9ULD9 1512 aaPredicted RBP35.55■■■■□ 3.28
PBX1-209ENST00000485769 SYNJ1O43426 1573 aa35.54■■■■□ 3.28
PBX1-209ENST00000485769 WDR97A6NE52 1622 aa35.47■■■■□ 3.27
PBX1-209ENST00000485769 EIF4G3O43432 1585 aaKnown RBP35.45■■■■□ 3.27
PBX1-209ENST00000485769 AQRO60306 1485 aaKnown RBP eCLIP35.41■■■■□ 3.26
PBX1-209ENST00000485769 TDRD9Q8NDG6 1382 aaKnown RBP35.4■■■■□ 3.26
PBX1-209ENST00000485769 ABCA10Q8WWZ4 1543 aa35.4■■■■□ 3.26
PBX1-209ENST00000485769 GAPVD1Q14C86 1478 aa35.26■■■■□ 3.23
PBX1-209ENST00000485769 GRIN2BQ13224 1484 aa35.25■■■■□ 3.23
PBX1-209ENST00000485769 DNAJC5Q9H3Z4 198 aa35.21■■■■□ 3.23
PBX1-209ENST00000485769 ABCA5Q8WWZ7 1642 aa35.19■■■■□ 3.22
PBX1-209ENST00000485769 MAGI1Q96QZ7 1491 aaPredicted RBP35.14■■■■□ 3.22
PBX1-209ENST00000485769 OSCARQ8IYS5 282 aa35.13■■■■□ 3.21
PBX1-209ENST00000485769 SNAPC4Q5SXM2 1469 aa35.1■■■■□ 3.21
PBX1-209ENST00000485769 PBRM1Q86U86 1689 aa35.1■■■■□ 3.21
PBX1-209ENST00000485769 TRIM41Q8WV44 630 aa35.08■■■■□ 3.21
PBX1-209ENST00000485769 FBLN2P98095 1184 aa35.04■■■■□ 3.2
PBX1-209ENST00000485769 KIF27Q86VH2 1401 aa35.03■■■■□ 3.2
PBX1-209ENST00000485769 CHMP7Q8WUX9 453 aaPredicted RBP35.01■■■■□ 3.2
PBX1-209ENST00000485769 ERICH3Q5RHP9 1530 aa35.01■■■■□ 3.19
PBX1-209ENST00000485769 SYNJ2O15056 1496 aa34.98■■■■□ 3.19
PBX1-209ENST00000485769 CHD1O14646 1710 aa34.95■■■■□ 3.18
PBX1-209ENST00000485769 FHAD1B1AJZ9 1412 aa34.89■■■■□ 3.18
PBX1-209ENST00000485769 ADAMTS12P58397 1594 aa34.84■■■■□ 3.17
PBX1-209ENST00000485769 IGF1RP08069 1367 aa34.79■■■■□ 3.16
PBX1-209ENST00000485769 GRIN2AQ12879 1464 aa34.76■■■■□ 3.15
PBX1-209ENST00000485769 CUL7Q14999 1698 aa34.73■■■■□ 3.15
PBX1-209ENST00000485769 CHIC1Q5VXU3 224 aa34.7■■■■□ 3.15
PBX1-209ENST00000485769 CARMIL1Q5VZK9 1371 aa34.63■■■■□ 3.13
PBX1-209ENST00000485769 CLASP1Q7Z460 1538 aa34.6■■■■□ 3.13
PBX1-209ENST00000485769 RUSC2Q8N2Y8 1516 aa34.6■■■■□ 3.13
PBX1-209ENST00000485769 NUP160Q12769 1436 aa34.59■■■■□ 3.13
PBX1-209ENST00000485769 EEA1Q15075 1411 aa34.53■■■■□ 3.12
PBX1-209ENST00000485769 CEP170Q5SW79 1584 aa34.51■■■■□ 3.12
PBX1-209ENST00000485769 RAPGEF2Q9Y4G8 1499 aa34.45■■■■□ 3.1
PBX1-209ENST00000485769 ARHGEF11O15085 1522 aa34.45■■■■□ 3.1
PBX1-209ENST00000485769 CSRNP3Q8WYN3 585 aa34.41■■■■□ 3.1
PBX1-209ENST00000485769 RIMBP3CA6NJZ7 1639 aa34.41■■■■□ 3.1
PBX1-209ENST00000485769 RIMBP3BA6NNM3 1639 aa34.41■■■■□ 3.1
PBX1-209ENST00000485769 RIMBP3Q9UFD9 1639 aa34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms