Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC44A1Q8WWI5 CROCCP3-202ENST00000420820 1947 ntBASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 AC018553.1-201ENST00000616682 1458 ntBASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SLC44A1Q8WWI5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 AC092666.2-201ENST00000613287 246 ntBASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 AC008694.1-202ENST00000636953 945 ntBASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 AC010980.2-201ENST00000587099 1412 ntBASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC44A1Q8WWI5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SLC44A1Q8WWI5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC44A1Q8WWI5 AL161938.1-201ENST00000569833 2180 ntBASIC19.64■□□□□ 0.74
SLC44A1Q8WWI5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC44A1Q8WWI5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC44A1Q8WWI5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC44A1Q8WWI5 NEFHP1-201ENST00000412845 2629 ntBASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 AC116351.2-201ENST00000606540 1585 ntBASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SLC44A1Q8WWI5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms