RNA–Protein interactions for RNA: ENST00000343516.7

CASKIN1-201, Transcript of CASK interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASKIN1, Length 5,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1-201ENST00000343516 DCAF8L2P0C7V8 631 aa32.45■■■□□ 2.78
CASKIN1-201ENST00000343516 SUPT5HO00267 1087 aaKnown RBP31.5■■■□□ 2.63
CASKIN1-201ENST00000343516 PELP1Q8IZL8 1130 aaKnown RBP31.32■■■□□ 2.6
CASKIN1-201ENST00000343516 NISCHQ9Y2I1 1504 aa31.22■■■□□ 2.59
CASKIN1-201ENST00000343516 SHROOM4Q9ULL8 1493 aa30.62■■■□□ 2.49
CASKIN1-201ENST00000343516 APLP2Q06481 763 aa30.27■■■□□ 2.44
CASKIN1-201ENST00000343516 EHMT2Q96KQ7 1210 aa30.19■■■□□ 2.42
CASKIN1-201ENST00000343516 ZEB1P37275 1124 aaPredicted RBP30.15■■■□□ 2.42
CASKIN1-201ENST00000343516 CENPBP07199 599 aaPredicted RBP30.14■■■□□ 2.42
CASKIN1-201ENST00000343516 PCGF6Q9BYE7 350 aa30.08■■■□□ 2.41
CASKIN1-201ENST00000343516 MYT1Q01538 1121 aa30.04■■■□□ 2.4
CASKIN1-201ENST00000343516 CCER1Q8TC90 406 aaPredicted RBP29.85■■■□□ 2.37
CASKIN1-201ENST00000343516 ERICH6Q7L0X2 663 aa29.8■■■□□ 2.36
CASKIN1-201ENST00000343516 FAM9AQ8IZU1 332 aaPredicted RBP29.64■■■□□ 2.34
CASKIN1-201ENST00000343516 TTBK1Q5TCY1 1321 aaPredicted RBP29.36■■■□□ 2.29
CASKIN1-201ENST00000343516 TRIM41Q8WV44 630 aa29.31■■■□□ 2.28
CASKIN1-201ENST00000343516 NEFLP07196 543 aa29.28■■■□□ 2.28
CASKIN1-201ENST00000343516 TRIM26Q12899 539 aaPredicted RBP28.96■■■□□ 2.23
CASKIN1-201ENST00000343516 HRCP23327 699 aa28.96■■■□□ 2.23
CASKIN1-201ENST00000343516 YTHDC1Q96MU7 727 aaKnown RBP28.94■■■□□ 2.22
CASKIN1-201ENST00000343516 UBTFP17480 764 aaKnown RBP28.88■■■□□ 2.21
CASKIN1-201ENST00000343516 RANGAP1P46060 587 aaPredicted RBP28.81■■■□□ 2.2
CASKIN1-201ENST00000343516 ATP1B4Q9UN42 357 aaPredicted RBP28.66■■■□□ 2.18
CASKIN1-201ENST00000343516 DAXXQ9UER7 740 aaPredicted RBP28.39■■■□□ 2.14
CASKIN1-201ENST00000343516 PPARGC1BQ86YN6 1023 aaKnown RBP28.33■■■□□ 2.13
CASKIN1-201ENST00000343516 CHIC1Q5VXU3 224 aa28.21■■■□□ 2.11
CASKIN1-201ENST00000343516 DIEXFQ68CQ4 756 aaKnown RBP28.05■■■□□ 2.08
CASKIN1-201ENST00000343516 LOC105371045A0A1W2PR82 267 aa28.05■■■□□ 2.08
CASKIN1-201ENST00000343516 RTL5Q5HYW3 569 aaPredicted RBP27.99■■■□□ 2.07
CASKIN1-201ENST00000343516 HNRNPUL2Q1KMD3 747 aaKnown RBP27.94■■■□□ 2.06
CASKIN1-201ENST00000343516 ITGAEP38570 1179 aa27.9■■■□□ 2.06
CASKIN1-201ENST00000343516 POLR3GLQ9BT43 218 aa27.81■■■□□ 2.04
CASKIN1-201ENST00000343516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.77■■■□□ 2.04
CASKIN1-201ENST00000343516 ZNF316A6NFI3 1004 aaPredicted RBP27.72■■■□□ 2.03
CASKIN1-201ENST00000343516 GTF3C3Q9Y5Q9 886 aa27.64■■■□□ 2.02
CASKIN1-201ENST00000343516 CLSPNQ9HAW4 1339 aa27.52■■■□□ 2
CASKIN1-201ENST00000343516 CDK11AQ9UQ88 783 aaPredicted RBP27.46■■□□□ 1.99
CASKIN1-201ENST00000343516 CNGB1Q14028 1251 aaPredicted RBP27.4■■□□□ 1.98
CASKIN1-201ENST00000343516 MYT1LQ9UL68 1186 aa27.39■■□□□ 1.98
CASKIN1-201ENST00000343516 ANP32CO43423 234 aa27.37■■□□□ 1.97
CASKIN1-201ENST00000343516 ACIN1Q9UKV3 1341 aaKnown RBP27.37■■□□□ 1.97
CASKIN1-201ENST00000343516 BCANQ96GW7 911 aa27.29■■□□□ 1.96
CASKIN1-201ENST00000343516 FAM50AQ14320 339 aaKnown RBP27.27■■□□□ 1.96
CASKIN1-201ENST00000343516 NEUROD1Q13562 356 aa27.15■■□□□ 1.94
CASKIN1-201ENST00000343516 TRIM52Q96A61 297 aa27.15■■□□□ 1.94
CASKIN1-201ENST00000343516 SLC4A1APQ9BWU0 796 aaKnown RBP27.13■■□□□ 1.93
CASKIN1-201ENST00000343516 ANP32AP39687 249 aaKnown RBP27.03■■□□□ 1.92
CASKIN1-201ENST00000343516 ZBTB47Q9UFB7 747 aaPredicted RBP26.94■■□□□ 1.9
CASKIN1-201ENST00000343516 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
CASKIN1-201ENST00000343516 CANXP27824 592 aaKnown RBP26.77■■□□□ 1.88
CASKIN1-201ENST00000343516 ZNF326Q5BKZ1 582 aaKnown RBP26.76■■□□□ 1.87
CASKIN1-201ENST00000343516 CSRNP3Q8WYN3 585 aa26.69■■□□□ 1.86
CASKIN1-201ENST00000343516 FKBP8Q14318 412 aa26.68■■□□□ 1.86
CASKIN1-201ENST00000343516 ANP32BQ92688 251 aaKnown RBP26.59■■□□□ 1.85
CASKIN1-201ENST00000343516 NEFMP07197 916 aa26.58■■□□□ 1.85
CASKIN1-201ENST00000343516 NPM2Q86SE8 214 aaKnown RBP26.56■■□□□ 1.84
CASKIN1-201ENST00000343516 GLIPR1L2Q4G1C9 344 aa26.56■■□□□ 1.84
CASKIN1-201ENST00000343516 EIF5BO60841 1220 aaKnown RBP26.52■■□□□ 1.84
CASKIN1-201ENST00000343516 TONSLQ96HA7 1378 aa26.47■■□□□ 1.83
CASKIN1-201ENST00000343516 HNRNPUQ00839 825 aaKnown RBP eCLIP26.46■■□□□ 1.83
CASKIN1-201ENST00000343516 UPF2Q9HAU5 1272 aaKnown RBP26.46■■□□□ 1.83
CASKIN1-201ENST00000343516 SCAF1Q9H7N4 1312 aaKnown RBP26.37■■□□□ 1.81
CASKIN1-201ENST00000343516 DDX10Q13206 875 aaKnown RBP26.33■■□□□ 1.8
CASKIN1-201ENST00000343516 HSP90AA1P07900 732 aaKnown RBP26.31■■□□□ 1.8
CASKIN1-201ENST00000343516 CCDC136Q96JN2 1154 aa26.31■■□□□ 1.8
CASKIN1-201ENST00000343516 PABPN1Q86U42 306 aaKnown RBP eCLIP26.29■■□□□ 1.8
CASKIN1-201ENST00000343516 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.26■■□□□ 1.79
CASKIN1-201ENST00000343516 FAM9BQ8IZU0 186 aa26.24■■□□□ 1.79
CASKIN1-201ENST00000343516 ABCC9O60706 1549 aa26.23■■□□□ 1.79
CASKIN1-201ENST00000343516 P3H3Q8IVL6 736 aa26.21■■□□□ 1.79
CASKIN1-201ENST00000343516 BCL11AQ9H165 835 aa26.19■■□□□ 1.78
CASKIN1-201ENST00000343516 NBR1Q14596 966 aa26.16■■□□□ 1.78
CASKIN1-201ENST00000343516 MIER1Q8N108 512 aa26.14■■□□□ 1.77
CASKIN1-201ENST00000343516 TMC1Q8TDI8 760 aa26.14■■□□□ 1.77
CASKIN1-201ENST00000343516 SLC24A1O60721 1099 aa26.13■■□□□ 1.77
CASKIN1-201ENST00000343516 ZNF777Q9ULD5 760 aaPredicted RBP26.07■■□□□ 1.76
CASKIN1-201ENST00000343516 MRS2Q9HD23 443 aa26.07■■□□□ 1.76
CASKIN1-201ENST00000343516 DDRGK1Q96HY6 314 aa26.05■■□□□ 1.76
CASKIN1-201ENST00000343516 FBLN2P98095 1184 aa26.04■■□□□ 1.76
CASKIN1-201ENST00000343516 ANP32EQ9BTT0 268 aa26.02■■□□□ 1.76
CASKIN1-201ENST00000343516 WDR43Q15061 677 aaKnown RBP eCLIP25.96■■□□□ 1.75
CASKIN1-201ENST00000343516 ARID3CA6NKF2 412 aa25.94■■□□□ 1.74
CASKIN1-201ENST00000343516 BECN1Q14457 450 aa25.91■■□□□ 1.74
CASKIN1-201ENST00000343516 ZCCHC6Q5VYS8 1495 aaKnown RBP25.9■■□□□ 1.74
CASKIN1-201ENST00000343516 SALL2Q9Y467 1007 aaPredicted RBP25.9■■□□□ 1.74
CASKIN1-201ENST00000343516 EIF4G2P78344 907 aaKnown RBP eCLIP25.87■■□□□ 1.737e-7■■■■■ 40.3
CASKIN1-201ENST00000343516 CCDC180Q9P1Z9 1646 aa25.83■■□□□ 1.73
CASKIN1-201ENST00000343516 PPM1GO15355 546 aaPredicted RBP25.81■■□□□ 1.72
CASKIN1-201ENST00000343516 IRX6P78412 446 aaPredicted RBP25.8■■□□□ 1.72
CASKIN1-201ENST00000343516 CLIP1P30622 1438 aa25.8■■□□□ 1.72
CASKIN1-201ENST00000343516 EEA1Q15075 1411 aa25.78■■□□□ 1.72
CASKIN1-201ENST00000343516 TRIM44Q96DX7 344 aaPredicted RBP25.78■■□□□ 1.72
CASKIN1-201ENST00000343516 ARXQ96QS3 562 aa25.74■■□□□ 1.71
CASKIN1-201ENST00000343516 MYH16Q9H6N6 1097 aa25.74■■□□□ 1.71
CASKIN1-201ENST00000343516 MTUS2Q5JR59 1369 aa25.73■■□□□ 1.71
CASKIN1-201ENST00000343516 GOLGA6L22H0YM25 854 aa25.73■■□□□ 1.71
CASKIN1-201ENST00000343516 CHIC2Q9UKJ5 165 aa25.72■■□□□ 1.71
CASKIN1-201ENST00000343516 SCRIBQ14160 1630 aa25.72■■□□□ 1.71
CASKIN1-201ENST00000343516 ERICH6BQ5W0A0 696 aa25.71■■□□□ 1.71
CASKIN1-201ENST00000343516 CHGAP10645 457 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms