Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 PIDD1-207ENST00000528122 577 ntTSL 330.72■■■□□ 2.518e-6■□□□□ 8.9
PABPN1Q86U42 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC30.67■■■□□ 2.58e-6■□□□□ 8.9
PABPN1Q86U42 FDPS-208ENST00000470171 746 ntTSL 230.67■■■□□ 2.56e-8■□□□□ 8.9
PABPN1Q86U42 SRSF7-203ENST00000415527 1135 ntTSL 530.03■■■□□ 2.48e-6■□□□□ 8.9
PABPN1Q86U42 NPDC1-203ENST00000472668 358 ntTSL 330.01■■■□□ 2.398e-6■□□□□ 8.9
PABPN1Q86U42 CPSF1-208ENST00000532560 701 ntTSL 329.68■■■□□ 2.348e-6■□□□□ 8.9
PABPN1Q86U42 FDPS-213ENST00000489003 976 ntTSL 229.46■■■□□ 2.316e-8■□□□□ 8.9
PABPN1Q86U42 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.316e-8■□□□□ 8.9
PABPN1Q86U42 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.298e-6■□□□□ 8.9
PABPN1Q86U42 TCF3-205ENST00000585731 1222 ntTSL 229.27■■■□□ 2.283e-7■□□□□ 8.9
PABPN1Q86U42 SREK1-212ENST00000522912 2047 ntTSL 1 (best)29■■■□□ 2.232e-9■□□□□ 8.9
PABPN1Q86U42 MED15-222ENST00000473244 2733 ntTSL 1 (best)28.69■■■□□ 2.183e-7■□□□□ 8.9
PABPN1Q86U42 TCF3-217ENST00000592628 1751 ntTSL 528.37■■■□□ 2.133e-7■□□□□ 8.9
PABPN1Q86U42 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.073e-7■□□□□ 8.9
PABPN1Q86U42 CCNL1-226ENST00000631619 2457 ntTSL 527.87■■■□□ 2.058e-6■□□□□ 8.9
PABPN1Q86U42 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC27.85■■■□□ 2.058e-6■□□□□ 8.9
PABPN1Q86U42 TKT-202ENST00000423516 2075 ntTSL 2 BASIC27.81■■■□□ 2.048e-6■□□□□ 8.9
PABPN1Q86U42 SREK1-209ENST00000520953 2172 ntTSL 527.75■■■□□ 2.032e-9■□□□□ 8.9
PABPN1Q86U42 NRBP1-206ENST00000460499 2561 ntTSL 227.7■■■□□ 2.028e-6■□□□□ 8.9
PABPN1Q86U42 BDH1-214ENST00000479425 1144 ntTSL 227.69■■■□□ 2.023e-7■□□□□ 8.9
PABPN1Q86U42 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.028e-6■□□□□ 8.9
PABPN1Q86U42 TTLL3-229ENST00000492440 1549 ntTSL 227.22■■□□□ 1.958e-6■□□□□ 8.9
PABPN1Q86U42 CALR-204ENST00000586967 394 ntTSL 227.21■■□□□ 1.953e-7■□□□□ 8.9
PABPN1Q86U42 NQO2-204ENST00000380454 851 ntTSL 2 BASIC27.2■■□□□ 1.948e-6■□□□□ 8.9
PABPN1Q86U42 NT5DC2-208ENST00000471522 582 ntTSL 327.19■■□□□ 1.948e-6■□□□□ 8.9
PABPN1Q86U42 ENO2-208ENST00000537838 541 ntTSL 427.15■■□□□ 1.943e-7■□□□□ 8.9
PABPN1Q86U42 ENO2-206ENST00000536199 823 ntTSL 526.68■■□□□ 1.863e-7■□□□□ 8.9
PABPN1Q86U42 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.848e-6■□□□□ 8.9
PABPN1Q86U42 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.848e-6■□□□□ 8.9
PABPN1Q86U42 HEXA-204ENST00000564677 572 ntTSL 226.36■■□□□ 1.818e-6■□□□□ 8.9
PABPN1Q86U42 FAM120A-203ENST00000427765 1710 ntTSL 1 (best)26.03■■□□□ 1.766e-8■□□□□ 8.9
PABPN1Q86U42 FANCA-214ENST00000563767 578 ntTSL 325.99■■□□□ 1.753e-7■□□□□ 8.9
PABPN1Q86U42 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC25.56■■□□□ 1.688e-6■□□□□ 8.9
PABPN1Q86U42 MSH5-209ENST00000450148 1000 ntTSL 525.42■■□□□ 1.668e-6■□□□□ 8.9
PABPN1Q86U42 HEXA-208ENST00000567027 1353 ntTSL 225.4■■□□□ 1.668e-6■□□□□ 8.9
PABPN1Q86U42 DYNC1LI2-208ENST00000564833 727 ntTSL 425.31■■□□□ 1.648e-6■□□□□ 8.9
PABPN1Q86U42 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.648e-6■□□□□ 8.9
PABPN1Q86U42 PDXDC1-212ENST00000565986 561 ntTSL 225.21■■□□□ 1.638e-6■□□□□ 8.9
PABPN1Q86U42 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.628e-6■□□□□ 8.9
PABPN1Q86U42 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.68e-6■□□□□ 8.9
PABPN1Q86U42 NCLN-208ENST00000592737 2735 ntTSL 324.8■■□□□ 1.568e-6■□□□□ 8.9
PABPN1Q86U42 TKT-201ENST00000296289 1931 ntTSL 5 BASIC24.75■■□□□ 1.558e-6■□□□□ 8.9
PABPN1Q86U42 TCF3-218ENST00000593064 2694 ntTSL 224.69■■□□□ 1.543e-7■□□□□ 8.9
PABPN1Q86U42 CALR-202ENST00000586760 913 ntTSL 224.68■■□□□ 1.543e-7■□□□□ 8.9
PABPN1Q86U42 MED15-231ENST00000493216 4701 ntTSL 224.51■■□□□ 1.513e-7■□□□□ 8.9
PABPN1Q86U42 NT5DC2-212ENST00000487779 536 ntTSL 324.43■■□□□ 1.58e-6■□□□□ 8.9
PABPN1Q86U42 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC24.39■■□□□ 1.498e-6■□□□□ 8.9
PABPN1Q86U42 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC24.32■■□□□ 1.488e-6■□□□□ 8.9
PABPN1Q86U42 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.473e-7■□□□□ 8.9
PABPN1Q86U42 PRPF8-206ENST00000572723 959 ntTSL 224.22■■□□□ 1.478e-6■□□□□ 8.9
PABPN1Q86U42 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.448e-6■□□□□ 8.9
PABPN1Q86U42 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC24.01■■□□□ 1.433e-7■□□□□ 8.9
PABPN1Q86U42 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC23.87■■□□□ 1.418e-6■□□□□ 8.9
PABPN1Q86U42 DYNC1LI2-213ENST00000568453 571 ntTSL 423.87■■□□□ 1.418e-6■□□□□ 8.9
PABPN1Q86U42 HNRNPA2B1-203ENST00000360787 1724 ntTSL 523.68■■□□□ 1.386e-8■□□□□ 8.9
PABPN1Q86U42 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.388e-6■□□□□ 8.9
PABPN1Q86U42 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC23.59■■□□□ 1.378e-6■□□□□ 8.9
PABPN1Q86U42 DYNC1LI2-209ENST00000565532 744 ntTSL 523.47■■□□□ 1.358e-6■□□□□ 8.9
PABPN1Q86U42 FANCA-219ENST00000566133 761 ntTSL 323.39■■□□□ 1.333e-7■□□□□ 8.9
PABPN1Q86U42 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.338e-6■□□□□ 8.9
PABPN1Q86U42 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.326e-8■□□□□ 8.9
PABPN1Q86U42 HEXA-211ENST00000567411 1743 ntTSL 523.04■■□□□ 1.288e-6■□□□□ 8.9
PABPN1Q86U42 HEXA-214ENST00000569116 449 ntTSL 223.03■■□□□ 1.288e-6■□□□□ 8.9
PABPN1Q86U42 TKT-210ENST00000469678 1871 ntTSL 522.65■■□□□ 1.228e-6■□□□□ 8.9
PABPN1Q86U42 KIAA0319L-202ENST00000373266 2377 ntTSL 5 BASIC22.61■■□□□ 1.218e-6■□□□□ 8.9
PABPN1Q86U42 DAP3-221ENST00000491777 556 ntTSL 322.21■■□□□ 1.158e-6■□□□□ 8.9
PABPN1Q86U42 DAP3-202ENST00000368336 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.138e-6■□□□□ 8.9
PABPN1Q86U42 HNRNPA2B1-206ENST00000490912 5328 ntTSL 222.08■■□□□ 1.136e-8■□□□□ 8.9
PABPN1Q86U42 HEXA-205ENST00000565873 721 ntTSL 221.79■■□□□ 1.088e-6■□□□□ 8.9
PABPN1Q86U42 MSH5-212ENST00000467319 688 ntTSL 221.63■■□□□ 1.058e-6■□□□□ 8.9
PABPN1Q86U42 MED15-211ENST00000433831 3267 ntTSL 521.2■□□□□ 0.983e-7■□□□□ 8.9
PABPN1Q86U42 NUMA1-229ENST00000545721 2796 ntTSL 521.18■□□□□ 0.988e-6■□□□□ 8.9
PABPN1Q86U42 DYNC1LI2-214ENST00000569320 641 ntTSL 321.18■□□□□ 0.988e-6■□□□□ 8.9
PABPN1Q86U42 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.958e-6■□□□□ 8.9
PABPN1Q86U42 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.933e-7■□□□□ 8.9
PABPN1Q86U42 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.938e-6■□□□□ 8.9
PABPN1Q86U42 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.928e-6■□□□□ 8.9
PABPN1Q86U42 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.918e-6■□□□□ 8.9
PABPN1Q86U42 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.913e-7■□□□□ 8.9
PABPN1Q86U42 CCNL1-216ENST00000475298 2362 ntTSL 1 (best)20.49■□□□□ 0.878e-6■□□□□ 8.9
PABPN1Q86U42 TKT-207ENST00000461139 1972 ntTSL 220.36■□□□□ 0.858e-6■□□□□ 8.9
PABPN1Q86U42 HDLBP-242ENST00000488013 651 ntTSL 220.33■□□□□ 0.853e-7■□□□□ 8.9
PABPN1Q86U42 NT5DC2-211ENST00000486792 419 ntTSL 320.04■□□□□ 0.88e-6■□□□□ 8.9
PABPN1Q86U42 SRSF7-206ENST00000431066 1847 ntTSL 519.9■□□□□ 0.788e-6■□□□□ 8.9
PABPN1Q86U42 SRSF7-208ENST00000443213 1903 ntTSL 519.86■□□□□ 0.778e-6■□□□□ 8.9
PABPN1Q86U42 TKT-208ENST00000462138 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.768e-6■□□□□ 8.9
PABPN1Q86U42 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.768e-6■□□□□ 8.9
PABPN1Q86U42 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.753e-7■□□□□ 8.9
PABPN1Q86U42 HNRNPA2B1-204ENST00000463181 6284 ntTSL 219.52■□□□□ 0.726e-8■□□□□ 8.9
PABPN1Q86U42 PDXDC1-216ENST00000569715 3775 ntTSL 1 (best) BASIC19.42■□□□□ 0.78e-6■□□□□ 8.9
PABPN1Q86U42 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.618e-6■□□□□ 8.9
PABPN1Q86U42 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.68e-6■□□□□ 8.9
PABPN1Q86U42 PDXDC1-217ENST00000570001 4828 ntTSL 218.7■□□□□ 0.588e-6■□□□□ 8.9
PABPN1Q86U42 NUMA1-220ENST00000541584 3557 ntAPPRIS ALT2 TSL 1 (best)18.67■□□□□ 0.588e-6■□□□□ 8.9
PABPN1Q86U42 SRSF7-205ENST00000425941 1944 ntTSL 518.59■□□□□ 0.578e-6■□□□□ 8.9
PABPN1Q86U42 PDXDC1-202ENST00000396410 4521 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.548e-6■□□□□ 8.9
PABPN1Q86U42 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.548e-6■□□□□ 8.9
PABPN1Q86U42 SREK1-205ENST00000519205 553 ntTSL 218.38■□□□□ 0.532e-9■□□□□ 8.9
PABPN1Q86U42 SRSF7-201ENST00000313117 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.528e-6■□□□□ 8.9
PABPN1Q86U42 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.513e-7■□□□□ 8.9
Retrieved 100 of 8,254 protein–RNA pairs in 236.1 ms