RNA–Protein interactions for RNA: ENST00000563767.1

FANCA-214, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-214ENST00000563767 NISCHQ9Y2I1 1504 aa31.49■■■□□ 2.63
FANCA-214ENST00000563767 ABCC9O60706 1549 aa27.92■■■□□ 2.06
FANCA-214ENST00000563767 CCDC180Q9P1Z9 1646 aa27.9■■■□□ 2.06
FANCA-214ENST00000563767 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.9
FANCA-214ENST00000563767 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
FANCA-214ENST00000563767 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
FANCA-214ENST00000563767 NACADO15069 1562 aa26.18■■□□□ 1.78
FANCA-214ENST00000563767 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
FANCA-214ENST00000563767 MYO15BQ96JP2 1530 aa26.08■■□□□ 1.77
FANCA-214ENST00000563767 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
FANCA-214ENST00000563767 PABPN1Q86U42 306 aaKnown RBP eCLIP25.99■■□□□ 1.753e-7■□□□□ 8.9
FANCA-214ENST00000563767 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
FANCA-214ENST00000563767 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
FANCA-214ENST00000563767 BICRAQ9NZM4 1560 aa25.42■■□□□ 1.66
FANCA-214ENST00000563767 DNAJC5Q9H3Z4 198 aa25.38■■□□□ 1.65
FANCA-214ENST00000563767 CECR2Q9BXF3 1484 aa25.24■■□□□ 1.63
FANCA-214ENST00000563767 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.6
FANCA-214ENST00000563767 SHROOM4Q9ULL8 1493 aa25.07■■□□□ 1.6
FANCA-214ENST00000563767 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
FANCA-214ENST00000563767 SMARCA4P51532 1647 aa24.39■■□□□ 1.5
FANCA-214ENST00000563767 CUX2O14529 1486 aa24.36■■□□□ 1.49
FANCA-214ENST00000563767 BAZ1AQ9NRL2 1556 aaPredicted RBP24.36■■□□□ 1.49
FANCA-214ENST00000563767 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
FANCA-214ENST00000563767 ERCC6Q03468 1493 aa24.21■■□□□ 1.47
FANCA-214ENST00000563767 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
FANCA-214ENST00000563767 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
FANCA-214ENST00000563767 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
FANCA-214ENST00000563767 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
FANCA-214ENST00000563767 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
FANCA-214ENST00000563767 WIZO95785 1651 aa24.05■■□□□ 1.44
FANCA-214ENST00000563767 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
FANCA-214ENST00000563767 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
FANCA-214ENST00000563767 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
FANCA-214ENST00000563767 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
FANCA-214ENST00000563767 NESP48681 1621 aa23.72■■□□□ 1.39
FANCA-214ENST00000563767 SUPT5HO00267 1087 aaKnown RBP23.58■■□□□ 1.37
FANCA-214ENST00000563767 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
FANCA-214ENST00000563767 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
FANCA-214ENST00000563767 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
FANCA-214ENST00000563767 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
FANCA-214ENST00000563767 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
FANCA-214ENST00000563767 CFTRP13569 1480 aa23.36■■□□□ 1.33
FANCA-214ENST00000563767 KIF21AQ7Z4S6 1674 aa23.3■■□□□ 1.32
FANCA-214ENST00000563767 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
FANCA-214ENST00000563767 PRDM2Q13029 1718 aa23.25■■□□□ 1.31
FANCA-214ENST00000563767 FANCD2Q9BXW9 1451 aa23.19■■□□□ 1.3
FANCA-214ENST00000563767 MRC2Q9UBG0 1479 aa23.18■■□□□ 1.3
FANCA-214ENST00000563767 CEP164Q9UPV0 1460 aa23.13■■□□□ 1.29
FANCA-214ENST00000563767 WDR62O43379 1518 aa23.08■■□□□ 1.29
FANCA-214ENST00000563767 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
FANCA-214ENST00000563767 TOPBP1Q92547 1522 aa22.86■■□□□ 1.25
FANCA-214ENST00000563767 TRHP20396 242 aaPredicted RBP22.85■■□□□ 1.25
FANCA-214ENST00000563767 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
FANCA-214ENST00000563767 ABCC8Q09428 1581 aa22.83■■□□□ 1.25
FANCA-214ENST00000563767 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
FANCA-214ENST00000563767 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
FANCA-214ENST00000563767 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
FANCA-214ENST00000563767 CYB5RLQ6IPT4 315 aa22.81■■□□□ 1.24
FANCA-214ENST00000563767 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
FANCA-214ENST00000563767 CUX1P39880 1505 aa22.77■■□□□ 1.24
FANCA-214ENST00000563767 ARHGEF11O15085 1522 aa22.72■■□□□ 1.23
FANCA-214ENST00000563767 POLA1P09884 1462 aaPredicted RBP22.67■■□□□ 1.22
FANCA-214ENST00000563767 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
FANCA-214ENST00000563767 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
FANCA-214ENST00000563767 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
FANCA-214ENST00000563767 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
FANCA-214ENST00000563767 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
FANCA-214ENST00000563767 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
FANCA-214ENST00000563767 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
FANCA-214ENST00000563767 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
FANCA-214ENST00000563767 SOGA1O94964 1423 aa22.57■■□□□ 1.2
FANCA-214ENST00000563767 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
FANCA-214ENST00000563767 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
FANCA-214ENST00000563767 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
FANCA-214ENST00000563767 FBLN2P98095 1184 aa22.46■■□□□ 1.19
FANCA-214ENST00000563767 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.194e-9■■■■□ 24.7
FANCA-214ENST00000563767 ARAP1Q96P48 1450 aa22.45■■□□□ 1.18
FANCA-214ENST00000563767 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
FANCA-214ENST00000563767 ABCA10Q8WWZ4 1543 aa22.43■■□□□ 1.18
FANCA-214ENST00000563767 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
FANCA-214ENST00000563767 GAPVD1Q14C86 1478 aa22.31■■□□□ 1.16
FANCA-214ENST00000563767 PBRM1Q86U86 1689 aa22.29■■□□□ 1.16
FANCA-214ENST00000563767 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
FANCA-214ENST00000563767 SNAPC4Q5SXM2 1469 aa22.23■■□□□ 1.15
FANCA-214ENST00000563767 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
FANCA-214ENST00000563767 CHD1O14646 1710 aa22.19■■□□□ 1.14
FANCA-214ENST00000563767 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
FANCA-214ENST00000563767 KIF27Q86VH2 1401 aa22.15■■□□□ 1.14
FANCA-214ENST00000563767 CHMP7Q8WUX9 453 aaPredicted RBP22.15■■□□□ 1.14
FANCA-214ENST00000563767 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
FANCA-214ENST00000563767 SYNJ2O15056 1496 aa22.11■■□□□ 1.13
FANCA-214ENST00000563767 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
FANCA-214ENST00000563767 IGF1RP08069 1367 aa22.09■■□□□ 1.13
FANCA-214ENST00000563767 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
FANCA-214ENST00000563767 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
FANCA-214ENST00000563767 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
FANCA-214ENST00000563767 GRIN2AQ12879 1464 aa22■■□□□ 1.11
FANCA-214ENST00000563767 CUL7Q14999 1698 aa21.98■■□□□ 1.11
FANCA-214ENST00000563767 CARMIL1Q5VZK9 1371 aa21.94■■□□□ 1.1
FANCA-214ENST00000563767 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms