RNA–Protein interactions for RNA: ENST00000313117.10

SRSF7-201, Transcript of serine and arginine rich splicing factor 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF7, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF7-201ENST00000313117 NISCHQ9Y2I1 1504 aa23.57■■□□□ 1.36
SRSF7-201ENST00000313117 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
SRSF7-201ENST00000313117 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
SRSF7-201ENST00000313117 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
SRSF7-201ENST00000313117 ZCCHC6Q5VYS8 1495 aaKnown RBP19.84■□□□□ 0.77
SRSF7-201ENST00000313117 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
SRSF7-201ENST00000313117 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
SRSF7-201ENST00000313117 ABCC9O60706 1549 aa19.11■□□□□ 0.65
SRSF7-201ENST00000313117 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
SRSF7-201ENST00000313117 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
SRSF7-201ENST00000313117 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
SRSF7-201ENST00000313117 NACADO15069 1562 aa18.65■□□□□ 0.58
SRSF7-201ENST00000313117 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
SRSF7-201ENST00000313117 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
SRSF7-201ENST00000313117 RB1CC1Q8TDY2 1594 aa18.43■□□□□ 0.54
SRSF7-201ENST00000313117 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
SRSF7-201ENST00000313117 LOC105371045A0A1W2PR82 267 aa18.33■□□□□ 0.52
SRSF7-201ENST00000313117 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.528e-6■□□□□ 8.9
SRSF7-201ENST00000313117 WIZO95785 1651 aa18.25■□□□□ 0.51
SRSF7-201ENST00000313117 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
SRSF7-201ENST00000313117 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
SRSF7-201ENST00000313117 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
SRSF7-201ENST00000313117 EHMT2Q96KQ7 1210 aa18.09■□□□□ 0.49
SRSF7-201ENST00000313117 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
SRSF7-201ENST00000313117 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
SRSF7-201ENST00000313117 SMARCA4P51532 1647 aa17.99■□□□□ 0.47
SRSF7-201ENST00000313117 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
SRSF7-201ENST00000313117 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
SRSF7-201ENST00000313117 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
SRSF7-201ENST00000313117 PELP1Q8IZL8 1130 aaKnown RBP17.83■□□□□ 0.45
SRSF7-201ENST00000313117 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
SRSF7-201ENST00000313117 ABCC8Q09428 1581 aa17.77■□□□□ 0.44
SRSF7-201ENST00000313117 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
SRSF7-201ENST00000313117 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
SRSF7-201ENST00000313117 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
SRSF7-201ENST00000313117 PPARGC1BQ86YN6 1023 aaKnown RBP17.59■□□□□ 0.41
SRSF7-201ENST00000313117 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.4
SRSF7-201ENST00000313117 SOGA1O94964 1423 aa17.58■□□□□ 0.4
SRSF7-201ENST00000313117 HRCP23327 699 aa17.57■□□□□ 0.4
SRSF7-201ENST00000313117 RUSC2Q8N2Y8 1516 aa17.53■□□□□ 0.4
SRSF7-201ENST00000313117 TRIM26Q12899 539 aaPredicted RBP17.52■□□□□ 0.4
SRSF7-201ENST00000313117 MYT1Q01538 1121 aa17.49■□□□□ 0.39
SRSF7-201ENST00000313117 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.388e-7■■□□□ 13.9
SRSF7-201ENST00000313117 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
SRSF7-201ENST00000313117 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
SRSF7-201ENST00000313117 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
SRSF7-201ENST00000313117 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
SRSF7-201ENST00000313117 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
SRSF7-201ENST00000313117 RANGAP1P46060 587 aaPredicted RBP17.26■□□□□ 0.35
SRSF7-201ENST00000313117 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
SRSF7-201ENST00000313117 HMGXB3Q12766 1538 aa17.23■□□□□ 0.35
SRSF7-201ENST00000313117 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.34
SRSF7-201ENST00000313117 EEA1Q15075 1411 aa17.2■□□□□ 0.34
SRSF7-201ENST00000313117 GOLGA3Q08378 1498 aa17.14■□□□□ 0.34
SRSF7-201ENST00000313117 CFTRP13569 1480 aa17.13■□□□□ 0.33
SRSF7-201ENST00000313117 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
SRSF7-201ENST00000313117 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
SRSF7-201ENST00000313117 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
SRSF7-201ENST00000313117 CUX1P39880 1505 aa17.1■□□□□ 0.33
SRSF7-201ENST00000313117 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.33
SRSF7-201ENST00000313117 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
SRSF7-201ENST00000313117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
SRSF7-201ENST00000313117 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
SRSF7-201ENST00000313117 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
SRSF7-201ENST00000313117 CLIP1P30622 1438 aa17■□□□□ 0.31
SRSF7-201ENST00000313117 KIF21BO75037 1637 aa16.99■□□□□ 0.31
SRSF7-201ENST00000313117 NESP48681 1621 aa16.95■□□□□ 0.3
SRSF7-201ENST00000313117 PRXQ9BXM0 1461 aa16.91■□□□□ 0.3
SRSF7-201ENST00000313117 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
SRSF7-201ENST00000313117 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.29
SRSF7-201ENST00000313117 CUX2O14529 1486 aa16.87■□□□□ 0.29
SRSF7-201ENST00000313117 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
SRSF7-201ENST00000313117 ZEB1P37275 1124 aaPredicted RBP16.86■□□□□ 0.29
SRSF7-201ENST00000313117 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
SRSF7-201ENST00000313117 IGF1RP08069 1367 aa16.84■□□□□ 0.29
SRSF7-201ENST00000313117 VPS8Q8N3P4 1428 aa16.84■□□□□ 0.29
SRSF7-201ENST00000313117 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
SRSF7-201ENST00000313117 RAD54L2Q9Y4B4 1467 aa16.81■□□□□ 0.28
SRSF7-201ENST00000313117 APLP2Q06481 763 aa16.8■□□□□ 0.28
SRSF7-201ENST00000313117 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
SRSF7-201ENST00000313117 ERICH3Q5RHP9 1530 aa16.78■□□□□ 0.28
SRSF7-201ENST00000313117 KANK4Q5T7N3 995 aaPredicted RBP16.77■□□□□ 0.28
SRSF7-201ENST00000313117 ARAP1Q96P48 1450 aa16.77■□□□□ 0.27
SRSF7-201ENST00000313117 CARMIL1Q5VZK9 1371 aa16.74■□□□□ 0.27
SRSF7-201ENST00000313117 P3H3Q8IVL6 736 aa16.72■□□□□ 0.27
SRSF7-201ENST00000313117 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
SRSF7-201ENST00000313117 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
SRSF7-201ENST00000313117 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
SRSF7-201ENST00000313117 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
SRSF7-201ENST00000313117 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
SRSF7-201ENST00000313117 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
SRSF7-201ENST00000313117 ATP1B4Q9UN42 357 aaPredicted RBP16.6■□□□□ 0.25
SRSF7-201ENST00000313117 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
SRSF7-201ENST00000313117 LAMC3Q9Y6N6 1575 aa16.58■□□□□ 0.24
SRSF7-201ENST00000313117 ITGAEP38570 1179 aa16.56■□□□□ 0.24
SRSF7-201ENST00000313117 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
SRSF7-201ENST00000313117 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
SRSF7-201ENST00000313117 FHOD3Q2V2M9 1422 aa16.5■□□□□ 0.23
SRSF7-201ENST00000313117 GAPVD1Q14C86 1478 aa16.45■□□□□ 0.22
SRSF7-201ENST00000313117 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.227e-7■■■■□ 20.9
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms