RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 NISCHQ9Y2I1 1504 aa29.1■■■□□ 2.25
PRPF8-206ENST00000572723 CCDC180Q9P1Z9 1646 aa26.02■■□□□ 1.76
PRPF8-206ENST00000572723 ABCC9O60706 1549 aa25.93■■□□□ 1.74
PRPF8-206ENST00000572723 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
PRPF8-206ENST00000572723 NACADO15069 1562 aa24.63■■□□□ 1.53
PRPF8-206ENST00000572723 DCAF8L2P0C7V8 631 aa24.6■■□□□ 1.53
PRPF8-206ENST00000572723 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
PRPF8-206ENST00000572723 DNAJC5BQ9UF47 199 aa24.31■■□□□ 1.48
PRPF8-206ENST00000572723 PABPN1Q86U42 306 aaKnown RBP eCLIP24.22■■□□□ 1.478e-6■□□□□ 8.9
PRPF8-206ENST00000572723 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
PRPF8-206ENST00000572723 ZCCHC6Q5VYS8 1495 aaKnown RBP24.1■■□□□ 1.45
PRPF8-206ENST00000572723 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
PRPF8-206ENST00000572723 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
PRPF8-206ENST00000572723 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
PRPF8-206ENST00000572723 SCRIBQ14160 1630 aa23.69■■□□□ 1.38
PRPF8-206ENST00000572723 CC2D2AQ9P2K1 1620 aa23.43■■□□□ 1.34
PRPF8-206ENST00000572723 EIF4G1Q04637 1599 aaKnown RBP23.41■■□□□ 1.34
PRPF8-206ENST00000572723 CECR2Q9BXF3 1484 aa23.37■■□□□ 1.33
PRPF8-206ENST00000572723 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
PRPF8-206ENST00000572723 ATAD2BQ9ULI0 1458 aa22.67■■□□□ 1.22
PRPF8-206ENST00000572723 SMARCA4P51532 1647 aa22.64■■□□□ 1.21
PRPF8-206ENST00000572723 SMARCA2P51531 1590 aa22.62■■□□□ 1.21
PRPF8-206ENST00000572723 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
PRPF8-206ENST00000572723 HMGXB3Q12766 1538 aa22.54■■□□□ 1.2
PRPF8-206ENST00000572723 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
PRPF8-206ENST00000572723 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
PRPF8-206ENST00000572723 MROH2BQ7Z745 1585 aa22.4■■□□□ 1.18
PRPF8-206ENST00000572723 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
PRPF8-206ENST00000572723 CUX2O14529 1486 aa22.34■■□□□ 1.17
PRPF8-206ENST00000572723 NESP48681 1621 aa22.31■■□□□ 1.16
PRPF8-206ENST00000572723 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
PRPF8-206ENST00000572723 LAMC3Q9Y6N6 1575 aa22.19■■□□□ 1.14
PRPF8-206ENST00000572723 WIZO95785 1651 aa22.12■■□□□ 1.13
PRPF8-206ENST00000572723 PDS5BQ9NTI5 1447 aa22.11■■□□□ 1.13
PRPF8-206ENST00000572723 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
PRPF8-206ENST00000572723 THOC2Q8NI27 1593 aaKnown RBP22.01■■□□□ 1.11
PRPF8-206ENST00000572723 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
PRPF8-206ENST00000572723 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
PRPF8-206ENST00000572723 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
PRPF8-206ENST00000572723 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
PRPF8-206ENST00000572723 CFTRP13569 1480 aa21.83■■□□□ 1.08
PRPF8-206ENST00000572723 CEP164Q9UPV0 1460 aa21.79■■□□□ 1.08
PRPF8-206ENST00000572723 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
PRPF8-206ENST00000572723 WDR62O43379 1518 aa21.77■■□□□ 1.08
PRPF8-206ENST00000572723 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.06
PRPF8-206ENST00000572723 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.04
PRPF8-206ENST00000572723 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
PRPF8-206ENST00000572723 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
PRPF8-206ENST00000572723 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
PRPF8-206ENST00000572723 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
PRPF8-206ENST00000572723 TOPBP1Q92547 1522 aa21.37■■□□□ 1.01
PRPF8-206ENST00000572723 TRIM41Q8WV44 630 aa21.3■■□□□ 1
PRPF8-206ENST00000572723 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
PRPF8-206ENST00000572723 DNMBPQ6XZF7 1577 aa21.29■■□□□ 1
PRPF8-206ENST00000572723 TARBP1Q13395 1621 aaKnown RBP21.16■□□□□ 0.98
PRPF8-206ENST00000572723 POLA1P09884 1462 aaPredicted RBP21.16■□□□□ 0.98
PRPF8-206ENST00000572723 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.98
PRPF8-206ENST00000572723 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
PRPF8-206ENST00000572723 EIF4G3O43432 1585 aaKnown RBP21.14■□□□□ 0.97
PRPF8-206ENST00000572723 SOGA1O94964 1423 aa21.12■□□□□ 0.97
PRPF8-206ENST00000572723 RAD54L2Q9Y4B4 1467 aa21.08■□□□□ 0.97
PRPF8-206ENST00000572723 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
PRPF8-206ENST00000572723 FGD5Q6ZNL6 1462 aa21.03■□□□□ 0.96
PRPF8-206ENST00000572723 FBLN2P98095 1184 aa21.03■□□□□ 0.96
PRPF8-206ENST00000572723 CUX1P39880 1505 aa21.03■□□□□ 0.96
PRPF8-206ENST00000572723 RIMBP3CA6NJZ7 1639 aa21.01■□□□□ 0.95
PRPF8-206ENST00000572723 RIMBP3BA6NNM3 1639 aa21.01■□□□□ 0.95
PRPF8-206ENST00000572723 RIMBP3Q9UFD9 1639 aa21.01■□□□□ 0.95
PRPF8-206ENST00000572723 WDR97A6NE52 1622 aa20.98■□□□□ 0.95
PRPF8-206ENST00000572723 CHD1O14646 1710 aa20.98■□□□□ 0.95
PRPF8-206ENST00000572723 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
PRPF8-206ENST00000572723 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
PRPF8-206ENST00000572723 GRIN2BQ13224 1484 aa20.9■□□□□ 0.94
PRPF8-206ENST00000572723 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
PRPF8-206ENST00000572723 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.94
PRPF8-206ENST00000572723 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
PRPF8-206ENST00000572723 GAPVD1Q14C86 1478 aa20.84■□□□□ 0.93
PRPF8-206ENST00000572723 ABCA10Q8WWZ4 1543 aa20.83■□□□□ 0.92
PRPF8-206ENST00000572723 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
PRPF8-206ENST00000572723 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.92
PRPF8-206ENST00000572723 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
PRPF8-206ENST00000572723 ARAP1Q96P48 1450 aa20.76■□□□□ 0.91
PRPF8-206ENST00000572723 CLASP1Q7Z460 1538 aa20.75■□□□□ 0.91
PRPF8-206ENST00000572723 PBRM1Q86U86 1689 aa20.75■□□□□ 0.91
PRPF8-206ENST00000572723 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
PRPF8-206ENST00000572723 ABCA5Q8WWZ7 1642 aa20.73■□□□□ 0.91
PRPF8-206ENST00000572723 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
PRPF8-206ENST00000572723 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
PRPF8-206ENST00000572723 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
PRPF8-206ENST00000572723 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
PRPF8-206ENST00000572723 ERICH3Q5RHP9 1530 aa20.57■□□□□ 0.88
PRPF8-206ENST00000572723 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
PRPF8-206ENST00000572723 NUP160Q12769 1436 aa20.55■□□□□ 0.88
PRPF8-206ENST00000572723 CEP170Q5SW79 1584 aa20.49■□□□□ 0.87
PRPF8-206ENST00000572723 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
PRPF8-206ENST00000572723 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
PRPF8-206ENST00000572723 SHROOM2Q13796 1616 aa20.42■□□□□ 0.86
PRPF8-206ENST00000572723 IGF1RP08069 1367 aa20.39■□□□□ 0.85
PRPF8-206ENST00000572723 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
PRPF8-206ENST00000572723 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms