RNA–Protein interactions for RNA: ENST00000443213.5

SRSF7-208, Transcript of serine and arginine rich splicing factor 7, humanhuman

TSL 5

Gene SRSF7, Length 1,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF7-208ENST00000443213 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
SRSF7-208ENST00000443213 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
SRSF7-208ENST00000443213 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
SRSF7-208ENST00000443213 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
SRSF7-208ENST00000443213 PHF23Q9BUL5 403 aaPredicted RBP22.12■■□□□ 1.13
SRSF7-208ENST00000443213 CCDC180Q9P1Z9 1646 aa21.85■■□□□ 1.09
SRSF7-208ENST00000443213 ABCC9O60706 1549 aa21.16■□□□□ 0.98
SRSF7-208ENST00000443213 FOXD1Q16676 465 aa20.88■□□□□ 0.93
SRSF7-208ENST00000443213 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
SRSF7-208ENST00000443213 DCAF8L2P0C7V8 631 aa20.73■□□□□ 0.91
SRSF7-208ENST00000443213 DCAF1Q9Y4B6 1507 aa20.49■□□□□ 0.87
SRSF7-208ENST00000443213 NACADO15069 1562 aa20.43■□□□□ 0.86
SRSF7-208ENST00000443213 MYO15BQ96JP2 1530 aa20.42■□□□□ 0.86
SRSF7-208ENST00000443213 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
SRSF7-208ENST00000443213 UNC13AQ9UPW8 1703 aa20.15■□□□□ 0.82
SRSF7-208ENST00000443213 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
SRSF7-208ENST00000443213 SHROOM4Q9ULL8 1493 aa20■□□□□ 0.79
SRSF7-208ENST00000443213 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
SRSF7-208ENST00000443213 BICRAQ9NZM4 1560 aa19.9■□□□□ 0.78
SRSF7-208ENST00000443213 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.778e-6■□□□□ 8.9
SRSF7-208ENST00000443213 PPP6R1Q9UPN7 881 aa19.55■□□□□ 0.72
SRSF7-208ENST00000443213 MSH5O43196 834 aa19.53■□□□□ 0.72
SRSF7-208ENST00000443213 PIAS4Q8N2W9 510 aaPredicted RBP19.49■□□□□ 0.71
SRSF7-208ENST00000443213 ADRA2BP18089 450 aa19.47■□□□□ 0.71
SRSF7-208ENST00000443213 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
SRSF7-208ENST00000443213 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
SRSF7-208ENST00000443213 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
SRSF7-208ENST00000443213 SMARCA4P51532 1647 aa19.19■□□□□ 0.66
SRSF7-208ENST00000443213 MROH2BQ7Z745 1585 aa19.18■□□□□ 0.66
SRSF7-208ENST00000443213 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
SRSF7-208ENST00000443213 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
SRSF7-208ENST00000443213 RSF1Q96T23 1441 aaPredicted RBP19.12■□□□□ 0.65
SRSF7-208ENST00000443213 SUPT5HO00267 1087 aaKnown RBP19.06■□□□□ 0.64
SRSF7-208ENST00000443213 WIZO95785 1651 aa19.03■□□□□ 0.64
SRSF7-208ENST00000443213 POTEDQ86YR6 584 aa19.01■□□□□ 0.63
SRSF7-208ENST00000443213 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
SRSF7-208ENST00000443213 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
SRSF7-208ENST00000443213 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
SRSF7-208ENST00000443213 NCAPD3P42695 1498 aa18.88■□□□□ 0.61
SRSF7-208ENST00000443213 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.61
SRSF7-208ENST00000443213 HMGXB3Q12766 1538 aa18.81■□□□□ 0.6
SRSF7-208ENST00000443213 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
SRSF7-208ENST00000443213 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.57
SRSF7-208ENST00000443213 NESP48681 1621 aa18.46■□□□□ 0.55
SRSF7-208ENST00000443213 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.53
SRSF7-208ENST00000443213 CFTRP13569 1480 aa18.34■□□□□ 0.53
SRSF7-208ENST00000443213 LAMC3Q9Y6N6 1575 aa18.32■□□□□ 0.52
SRSF7-208ENST00000443213 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
SRSF7-208ENST00000443213 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
SRSF7-208ENST00000443213 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
SRSF7-208ENST00000443213 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
SRSF7-208ENST00000443213 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
SRSF7-208ENST00000443213 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.48
SRSF7-208ENST00000443213 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
SRSF7-208ENST00000443213 THOC2Q8NI27 1593 aaKnown RBP18.05■□□□□ 0.48
SRSF7-208ENST00000443213 URB2Q14146 1524 aaKnown RBP18.02■□□□□ 0.48
SRSF7-208ENST00000443213 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.478e-7■■□□□ 13.9
SRSF7-208ENST00000443213 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
SRSF7-208ENST00000443213 CUX1P39880 1505 aa17.96■□□□□ 0.47
SRSF7-208ENST00000443213 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
SRSF7-208ENST00000443213 WDR62O43379 1518 aa17.94■□□□□ 0.46
SRSF7-208ENST00000443213 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
SRSF7-208ENST00000443213 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
SRSF7-208ENST00000443213 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
SRSF7-208ENST00000443213 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
SRSF7-208ENST00000443213 TOP2BQ02880 1626 aa17.86■□□□□ 0.45
SRSF7-208ENST00000443213 BIVM-ERCC5R4GMW8 1640 aa17.86■□□□□ 0.45
SRSF7-208ENST00000443213 CUX2O14529 1486 aa17.82■□□□□ 0.44
SRSF7-208ENST00000443213 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
SRSF7-208ENST00000443213 FGD5Q6ZNL6 1462 aa17.81■□□□□ 0.44
SRSF7-208ENST00000443213 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
SRSF7-208ENST00000443213 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
SRSF7-208ENST00000443213 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
SRSF7-208ENST00000443213 SOGA1O94964 1423 aa17.76■□□□□ 0.43
SRSF7-208ENST00000443213 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
SRSF7-208ENST00000443213 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
SRSF7-208ENST00000443213 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
SRSF7-208ENST00000443213 IFT140Q96RY7 1462 aa17.68■□□□□ 0.42
SRSF7-208ENST00000443213 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
SRSF7-208ENST00000443213 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
SRSF7-208ENST00000443213 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
SRSF7-208ENST00000443213 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.417e-7■■■■□ 20.9
SRSF7-208ENST00000443213 RUSC2Q8N2Y8 1516 aa17.6■□□□□ 0.41
SRSF7-208ENST00000443213 EIF4G3O43432 1585 aaKnown RBP17.6■□□□□ 0.41
SRSF7-208ENST00000443213 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
SRSF7-208ENST00000443213 ABCA5Q8WWZ7 1642 aa17.57■□□□□ 0.4
SRSF7-208ENST00000443213 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
SRSF7-208ENST00000443213 PBRM1Q86U86 1689 aa17.51■□□□□ 0.39
SRSF7-208ENST00000443213 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
SRSF7-208ENST00000443213 CSRNP3Q8WYN3 585 aa17.51■□□□□ 0.39
SRSF7-208ENST00000443213 IGF1RP08069 1367 aa17.5■□□□□ 0.39
SRSF7-208ENST00000443213 EEA1Q15075 1411 aa17.5■□□□□ 0.39
SRSF7-208ENST00000443213 GRIN2BQ13224 1484 aa17.46■□□□□ 0.39
SRSF7-208ENST00000443213 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
SRSF7-208ENST00000443213 SNAPC4Q5SXM2 1469 aa17.41■□□□□ 0.38
SRSF7-208ENST00000443213 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
SRSF7-208ENST00000443213 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
SRSF7-208ENST00000443213 CHD1O14646 1710 aa17.36■□□□□ 0.37
SRSF7-208ENST00000443213 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
SRSF7-208ENST00000443213 PRXQ9BXM0 1461 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms