RNA–Protein interactions for RNA: ENST00000479425.5

BDH1-214, Transcript of 3-hydroxybutyrate dehydrogenase 1, humanhuman

TSL 2

Gene BDH1, Length 1,144 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDH1-214ENST00000479425 NISCHQ9Y2I1 1504 aa33.11■■■□□ 2.89
BDH1-214ENST00000479425 ABCC9O60706 1549 aa29.77■■■□□ 2.36
BDH1-214ENST00000479425 CCDC180Q9P1Z9 1646 aa29.76■■■□□ 2.35
BDH1-214ENST00000479425 RB1CC1Q8TDY2 1594 aa28.32■■■□□ 2.12
BDH1-214ENST00000479425 NACADO15069 1562 aa28.11■■■□□ 2.09
BDH1-214ENST00000479425 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
BDH1-214ENST00000479425 DCAF8L2P0C7V8 631 aa27.91■■■□□ 2.06
BDH1-214ENST00000479425 UNC13AQ9UPW8 1703 aa27.79■■■□□ 2.04
BDH1-214ENST00000479425 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
BDH1-214ENST00000479425 PABPN1Q86U42 306 aaKnown RBP eCLIP27.69■■■□□ 2.023e-7■□□□□ 8.9
BDH1-214ENST00000479425 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
BDH1-214ENST00000479425 ZCCHC6Q5VYS8 1495 aaKnown RBP27.43■■□□□ 1.98
BDH1-214ENST00000479425 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
BDH1-214ENST00000479425 SCRIBQ14160 1630 aa27.11■■□□□ 1.93
BDH1-214ENST00000479425 SHROOM4Q9ULL8 1493 aa27.08■■□□□ 1.93
BDH1-214ENST00000479425 CC2D2AQ9P2K1 1620 aa26.92■■□□□ 1.9
BDH1-214ENST00000479425 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
BDH1-214ENST00000479425 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
BDH1-214ENST00000479425 NCAPD3P42695 1498 aa25.94■■□□□ 1.74
BDH1-214ENST00000479425 ATAD2BQ9ULI0 1458 aa25.86■■□□□ 1.73
BDH1-214ENST00000479425 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
BDH1-214ENST00000479425 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
BDH1-214ENST00000479425 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
BDH1-214ENST00000479425 DNAJC5Q9H3Z4 198 aa25.7■■□□□ 1.7
BDH1-214ENST00000479425 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
BDH1-214ENST00000479425 ERCC6Q03468 1493 aa25.67■■□□□ 1.7
BDH1-214ENST00000479425 CUX2O14529 1486 aa25.66■■□□□ 1.7
BDH1-214ENST00000479425 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
BDH1-214ENST00000479425 PEG3Q9GZU2 1588 aa25.6■■□□□ 1.69
BDH1-214ENST00000479425 NESP48681 1621 aa25.58■■□□□ 1.69
BDH1-214ENST00000479425 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
BDH1-214ENST00000479425 LAMC3Q9Y6N6 1575 aa25.38■■□□□ 1.65
BDH1-214ENST00000479425 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
BDH1-214ENST00000479425 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
BDH1-214ENST00000479425 WIZO95785 1651 aa25.24■■□□□ 1.63
BDH1-214ENST00000479425 PDS5BQ9NTI5 1447 aa25.2■■□□□ 1.62
BDH1-214ENST00000479425 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
BDH1-214ENST00000479425 MRC2Q9UBG0 1479 aa25■■□□□ 1.59
BDH1-214ENST00000479425 WDR62O43379 1518 aa24.96■■□□□ 1.59
BDH1-214ENST00000479425 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.59
BDH1-214ENST00000479425 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.58
BDH1-214ENST00000479425 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
BDH1-214ENST00000479425 FANCD2Q9BXW9 1451 aa24.87■■□□□ 1.57
BDH1-214ENST00000479425 CFTRP13569 1480 aa24.86■■□□□ 1.57
BDH1-214ENST00000479425 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
BDH1-214ENST00000479425 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
BDH1-214ENST00000479425 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
BDH1-214ENST00000479425 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
BDH1-214ENST00000479425 OSCARQ8IYS5 282 aa24.46■■□□□ 1.51
BDH1-214ENST00000479425 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
BDH1-214ENST00000479425 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
BDH1-214ENST00000479425 IFT140Q96RY7 1462 aa24.39■■□□□ 1.5
BDH1-214ENST00000479425 ABCC8Q09428 1581 aa24.32■■□□□ 1.48
BDH1-214ENST00000479425 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
BDH1-214ENST00000479425 EIF4G3O43432 1585 aaKnown RBP24.27■■□□□ 1.48
BDH1-214ENST00000479425 TARBP1Q13395 1621 aaKnown RBP24.23■■□□□ 1.47
BDH1-214ENST00000479425 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
BDH1-214ENST00000479425 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
BDH1-214ENST00000479425 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
BDH1-214ENST00000479425 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.46
BDH1-214ENST00000479425 POLA1P09884 1462 aaPredicted RBP24.15■■□□□ 1.46
BDH1-214ENST00000479425 CHD1O14646 1710 aa24.13■■□□□ 1.45
BDH1-214ENST00000479425 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
BDH1-214ENST00000479425 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
BDH1-214ENST00000479425 SOGA1O94964 1423 aa24.02■■□□□ 1.44
BDH1-214ENST00000479425 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
BDH1-214ENST00000479425 CUX1P39880 1505 aa23.99■■□□□ 1.43
BDH1-214ENST00000479425 TDRD9Q8NDG6 1382 aaKnown RBP23.98■■□□□ 1.43
BDH1-214ENST00000479425 FBLN2P98095 1184 aa23.96■■□□□ 1.43
BDH1-214ENST00000479425 WDR97A6NE52 1622 aa23.94■■□□□ 1.42
BDH1-214ENST00000479425 SNAPC4Q5SXM2 1469 aa23.9■■□□□ 1.42
BDH1-214ENST00000479425 CYB5RLQ6IPT4 315 aa23.9■■□□□ 1.42
BDH1-214ENST00000479425 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
BDH1-214ENST00000479425 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
BDH1-214ENST00000479425 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
BDH1-214ENST00000479425 CLASP1Q7Z460 1538 aa23.81■■□□□ 1.4
BDH1-214ENST00000479425 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
BDH1-214ENST00000479425 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
BDH1-214ENST00000479425 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
BDH1-214ENST00000479425 SYNJ1O43426 1573 aa23.77■■□□□ 1.4
BDH1-214ENST00000479425 SYNJ2O15056 1496 aa23.75■■□□□ 1.39
BDH1-214ENST00000479425 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
BDH1-214ENST00000479425 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
BDH1-214ENST00000479425 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
BDH1-214ENST00000479425 TRHP20396 242 aaPredicted RBP23.63■■□□□ 1.37
BDH1-214ENST00000479425 BIVM-ERCC5R4GMW8 1640 aa23.61■■□□□ 1.37
BDH1-214ENST00000479425 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
BDH1-214ENST00000479425 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.36
BDH1-214ENST00000479425 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
BDH1-214ENST00000479425 GRIN2AQ12879 1464 aa23.52■■□□□ 1.36
BDH1-214ENST00000479425 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
BDH1-214ENST00000479425 ERCC6L2Q5T890 1561 aa23.46■■□□□ 1.35
BDH1-214ENST00000479425 NUP160Q12769 1436 aa23.44■■□□□ 1.34
BDH1-214ENST00000479425 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
BDH1-214ENST00000479425 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
BDH1-214ENST00000479425 SHROOM2Q13796 1616 aa23.39■■□□□ 1.33
BDH1-214ENST00000479425 PRG4Q92954 1404 aaPredicted RBP23.22■■□□□ 1.31
BDH1-214ENST00000479425 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
BDH1-214ENST00000479425 JPH4Q96JJ6 628 aa23.19■■□□□ 1.3
BDH1-214ENST00000479425 KIF13AQ9H1H9 1805 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms