RNA–Protein interactions for RNA: ENST00000425941.6

SRSF7-205, Transcript of serine and arginine rich splicing factor 7, humanhuman

TSL 5

Gene SRSF7, Length 1,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF7-205ENST00000425941 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
SRSF7-205ENST00000425941 CCDC180Q9P1Z9 1646 aa20.43■□□□□ 0.86
SRSF7-205ENST00000425941 ABCC9O60706 1549 aa19.89■□□□□ 0.77
SRSF7-205ENST00000425941 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
SRSF7-205ENST00000425941 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
SRSF7-205ENST00000425941 RB1CC1Q8TDY2 1594 aa19.14■□□□□ 0.65
SRSF7-205ENST00000425941 NACADO15069 1562 aa19.14■□□□□ 0.65
SRSF7-205ENST00000425941 MYO15BQ96JP2 1530 aa19.04■□□□□ 0.64
SRSF7-205ENST00000425941 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
SRSF7-205ENST00000425941 UNC13AQ9UPW8 1703 aa18.84■□□□□ 0.61
SRSF7-205ENST00000425941 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
SRSF7-205ENST00000425941 BICRAQ9NZM4 1560 aa18.63■□□□□ 0.57
SRSF7-205ENST00000425941 PABPN1Q86U42 306 aaKnown RBP eCLIP18.59■□□□□ 0.578e-6■□□□□ 8.9
SRSF7-205ENST00000425941 SHROOM4Q9ULL8 1493 aa18.4■□□□□ 0.54
SRSF7-205ENST00000425941 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
SRSF7-205ENST00000425941 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
SRSF7-205ENST00000425941 CC2D2AQ9P2K1 1620 aa18■□□□□ 0.47
SRSF7-205ENST00000425941 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
SRSF7-205ENST00000425941 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
SRSF7-205ENST00000425941 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
SRSF7-205ENST00000425941 MROH2BQ7Z745 1585 aa17.78■□□□□ 0.44
SRSF7-205ENST00000425941 SUPT5HO00267 1087 aaKnown RBP17.72■□□□□ 0.43
SRSF7-205ENST00000425941 ATAD2BQ9ULI0 1458 aa17.71■□□□□ 0.43
SRSF7-205ENST00000425941 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
SRSF7-205ENST00000425941 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
SRSF7-205ENST00000425941 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
SRSF7-205ENST00000425941 WIZO95785 1651 aa17.63■□□□□ 0.41
SRSF7-205ENST00000425941 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
SRSF7-205ENST00000425941 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
SRSF7-205ENST00000425941 BAZ1BQ9UIG0 1483 aaKnown RBP17.57■□□□□ 0.4
SRSF7-205ENST00000425941 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
SRSF7-205ENST00000425941 NESP48681 1621 aa17.27■□□□□ 0.36
SRSF7-205ENST00000425941 AEBP2Q6ZN18 517 aaPredicted RBP17.23■□□□□ 0.35
SRSF7-205ENST00000425941 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
SRSF7-205ENST00000425941 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
SRSF7-205ENST00000425941 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
SRSF7-205ENST00000425941 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
SRSF7-205ENST00000425941 ERCC6Q03468 1493 aa17.09■□□□□ 0.33
SRSF7-205ENST00000425941 CFTRP13569 1480 aa17.08■□□□□ 0.32
SRSF7-205ENST00000425941 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
SRSF7-205ENST00000425941 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
SRSF7-205ENST00000425941 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
SRSF7-205ENST00000425941 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
SRSF7-205ENST00000425941 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
SRSF7-205ENST00000425941 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
SRSF7-205ENST00000425941 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
SRSF7-205ENST00000425941 CUX2O14529 1486 aa16.85■□□□□ 0.29
SRSF7-205ENST00000425941 WDR62O43379 1518 aa16.85■□□□□ 0.29
SRSF7-205ENST00000425941 URB2Q14146 1524 aaKnown RBP16.83■□□□□ 0.29
SRSF7-205ENST00000425941 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
SRSF7-205ENST00000425941 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
SRSF7-205ENST00000425941 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
SRSF7-205ENST00000425941 CUX1P39880 1505 aa16.67■□□□□ 0.26
SRSF7-205ENST00000425941 ABCC8Q09428 1581 aa16.65■□□□□ 0.26
SRSF7-205ENST00000425941 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
SRSF7-205ENST00000425941 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
SRSF7-205ENST00000425941 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
SRSF7-205ENST00000425941 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.248e-7■■□□□ 13.9
SRSF7-205ENST00000425941 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
SRSF7-205ENST00000425941 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
SRSF7-205ENST00000425941 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
SRSF7-205ENST00000425941 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
SRSF7-205ENST00000425941 TOP2BQ02880 1626 aa16.54■□□□□ 0.24
SRSF7-205ENST00000425941 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
SRSF7-205ENST00000425941 SOGA1O94964 1423 aa16.49■□□□□ 0.23
SRSF7-205ENST00000425941 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
SRSF7-205ENST00000425941 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
SRSF7-205ENST00000425941 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.227e-7■■■■□ 20.9
SRSF7-205ENST00000425941 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
SRSF7-205ENST00000425941 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
SRSF7-205ENST00000425941 ABCA5Q8WWZ7 1642 aa16.37■□□□□ 0.21
SRSF7-205ENST00000425941 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
SRSF7-205ENST00000425941 FAM9AQ8IZU1 332 aaPredicted RBP16.34■□□□□ 0.21
SRSF7-205ENST00000425941 EEA1Q15075 1411 aa16.33■□□□□ 0.2
SRSF7-205ENST00000425941 GAPVD1Q14C86 1478 aa16.32■□□□□ 0.2
SRSF7-205ENST00000425941 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
SRSF7-205ENST00000425941 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
SRSF7-205ENST00000425941 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
SRSF7-205ENST00000425941 CHD1O14646 1710 aa16.29■□□□□ 0.2
SRSF7-205ENST00000425941 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.19
SRSF7-205ENST00000425941 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
SRSF7-205ENST00000425941 MAGI1Q96QZ7 1491 aaPredicted RBP16.24■□□□□ 0.19
SRSF7-205ENST00000425941 ADAMTS12P58397 1594 aa16.21■□□□□ 0.19
SRSF7-205ENST00000425941 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
SRSF7-205ENST00000425941 KIF27Q86VH2 1401 aa16.18■□□□□ 0.18
SRSF7-205ENST00000425941 DNAJC5Q9H3Z4 198 aa16.18■□□□□ 0.18
SRSF7-205ENST00000425941 SYNJ2O15056 1496 aa16.17■□□□□ 0.18
SRSF7-205ENST00000425941 FBLN2P98095 1184 aa16.17■□□□□ 0.18
SRSF7-205ENST00000425941 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
SRSF7-205ENST00000425941 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
SRSF7-205ENST00000425941 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
SRSF7-205ENST00000425941 IGF1RP08069 1367 aa16.12■□□□□ 0.17
SRSF7-205ENST00000425941 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
SRSF7-205ENST00000425941 CUL7Q14999 1698 aa16.1■□□□□ 0.17
SRSF7-205ENST00000425941 CLASP1Q7Z460 1538 aa16.06■□□□□ 0.16
SRSF7-205ENST00000425941 CEP170Q5SW79 1584 aa16.06■□□□□ 0.16
SRSF7-205ENST00000425941 PRXQ9BXM0 1461 aa16.05■□□□□ 0.16
SRSF7-205ENST00000425941 KIF21BO75037 1637 aa16.05■□□□□ 0.16
SRSF7-205ENST00000425941 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
SRSF7-205ENST00000425941 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms