RNA–Protein interactions for RNA: ENST00000586760.1

CALR-202, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 913 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-202ENST00000586760 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
CALR-202ENST00000586760 ABCC9O60706 1549 aa26.39■■□□□ 1.81
CALR-202ENST00000586760 CCDC180Q9P1Z9 1646 aa26.17■■□□□ 1.78
CALR-202ENST00000586760 RB1CC1Q8TDY2 1594 aa25.07■■□□□ 1.6
CALR-202ENST00000586760 DCAF8L2P0C7V8 631 aa25.04■■□□□ 1.6
CALR-202ENST00000586760 NACADO15069 1562 aa24.91■■□□□ 1.58
CALR-202ENST00000586760 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
CALR-202ENST00000586760 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.543e-7■□□□□ 8.9
CALR-202ENST00000586760 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.53
CALR-202ENST00000586760 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
CALR-202ENST00000586760 DCAF1Q9Y4B6 1507 aa24.23■■□□□ 1.47
CALR-202ENST00000586760 BICRAQ9NZM4 1560 aa24.22■■□□□ 1.47
CALR-202ENST00000586760 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
CALR-202ENST00000586760 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
CALR-202ENST00000586760 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
CALR-202ENST00000586760 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
CALR-202ENST00000586760 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
CALR-202ENST00000586760 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.38
CALR-202ENST00000586760 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
CALR-202ENST00000586760 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
CALR-202ENST00000586760 DNAJC5Q9H3Z4 198 aa22.94■■□□□ 1.26
CALR-202ENST00000586760 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
CALR-202ENST00000586760 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
CALR-202ENST00000586760 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
CALR-202ENST00000586760 CUX2O14529 1486 aa22.79■■□□□ 1.24
CALR-202ENST00000586760 HMGXB3Q12766 1538 aa22.78■■□□□ 1.24
CALR-202ENST00000586760 BAZ1AQ9NRL2 1556 aaPredicted RBP22.77■■□□□ 1.24
CALR-202ENST00000586760 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
CALR-202ENST00000586760 NESP48681 1621 aa22.6■■□□□ 1.21
CALR-202ENST00000586760 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
CALR-202ENST00000586760 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
CALR-202ENST00000586760 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
CALR-202ENST00000586760 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
CALR-202ENST00000586760 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
CALR-202ENST00000586760 THOC2Q8NI27 1593 aaKnown RBP22.26■■□□□ 1.15
CALR-202ENST00000586760 MRC2Q9UBG0 1479 aa22.19■■□□□ 1.14
CALR-202ENST00000586760 WIZO95785 1651 aa22.19■■□□□ 1.14
CALR-202ENST00000586760 RSF1Q96T23 1441 aaPredicted RBP22.17■■□□□ 1.14
CALR-202ENST00000586760 KIF21AQ7Z4S6 1674 aa22.14■■□□□ 1.13
CALR-202ENST00000586760 CEP164Q9UPV0 1460 aa22.1■■□□□ 1.13
CALR-202ENST00000586760 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
CALR-202ENST00000586760 CFTRP13569 1480 aa22.07■■□□□ 1.12
CALR-202ENST00000586760 WDR62O43379 1518 aa22.06■■□□□ 1.12
CALR-202ENST00000586760 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
CALR-202ENST00000586760 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
CALR-202ENST00000586760 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
CALR-202ENST00000586760 URB2Q14146 1524 aaKnown RBP21.83■■□□□ 1.09
CALR-202ENST00000586760 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
CALR-202ENST00000586760 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
CALR-202ENST00000586760 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
CALR-202ENST00000586760 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
CALR-202ENST00000586760 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
CALR-202ENST00000586760 PRDM2Q13029 1718 aa21.51■■□□□ 1.03
CALR-202ENST00000586760 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
CALR-202ENST00000586760 FBLN2P98095 1184 aa21.48■■□□□ 1.03
CALR-202ENST00000586760 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.032e-12■■□□□ 12.4
CALR-202ENST00000586760 SOGA1O94964 1423 aa21.42■■□□□ 1.02
CALR-202ENST00000586760 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
CALR-202ENST00000586760 CYB5RLQ6IPT4 315 aa21.38■■□□□ 1.01
CALR-202ENST00000586760 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
CALR-202ENST00000586760 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
CALR-202ENST00000586760 ARHGEF11O15085 1522 aa21.34■■□□□ 1.01
CALR-202ENST00000586760 RAD54L2Q9Y4B4 1467 aa21.33■■□□□ 1.01
CALR-202ENST00000586760 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1
CALR-202ENST00000586760 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
CALR-202ENST00000586760 RIMBP3CA6NJZ7 1639 aa21.32■■□□□ 1
CALR-202ENST00000586760 RIMBP3BA6NNM3 1639 aa21.32■■□□□ 1
CALR-202ENST00000586760 RIMBP3Q9UFD9 1639 aa21.32■■□□□ 1
CALR-202ENST00000586760 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
CALR-202ENST00000586760 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
CALR-202ENST00000586760 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
CALR-202ENST00000586760 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
CALR-202ENST00000586760 CUX1P39880 1505 aa21.19■□□□□ 0.98
CALR-202ENST00000586760 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
CALR-202ENST00000586760 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
CALR-202ENST00000586760 MAGI1Q96QZ7 1491 aaPredicted RBP21.16■□□□□ 0.98
CALR-202ENST00000586760 CHD1O14646 1710 aa21.12■□□□□ 0.97
CALR-202ENST00000586760 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
CALR-202ENST00000586760 SYNJ2O15056 1496 aa21.1■□□□□ 0.97
CALR-202ENST00000586760 GAPVD1Q14C86 1478 aa21.1■□□□□ 0.97
CALR-202ENST00000586760 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
CALR-202ENST00000586760 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
CALR-202ENST00000586760 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
CALR-202ENST00000586760 CLASP1Q7Z460 1538 aa21■□□□□ 0.95
CALR-202ENST00000586760 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
CALR-202ENST00000586760 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
CALR-202ENST00000586760 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
CALR-202ENST00000586760 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
CALR-202ENST00000586760 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
CALR-202ENST00000586760 NUP160Q12769 1436 aa20.8■□□□□ 0.92
CALR-202ENST00000586760 JPH4Q96JJ6 628 aa20.76■□□□□ 0.91
CALR-202ENST00000586760 ERICH3Q5RHP9 1530 aa20.76■□□□□ 0.91
CALR-202ENST00000586760 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
CALR-202ENST00000586760 ADAMTS12P58397 1594 aa20.73■□□□□ 0.91
CALR-202ENST00000586760 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
CALR-202ENST00000586760 PRG4Q92954 1404 aaPredicted RBP20.68■□□□□ 0.9
CALR-202ENST00000586760 NPM1P06748 294 aaKnown RBP eCLIP20.66■□□□□ 0.9
CALR-202ENST00000586760 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
CALR-202ENST00000586760 ERCC6L2Q5T890 1561 aa20.64■□□□□ 0.9
CALR-202ENST00000586760 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms