RNA–Protein interactions for RNA: ENST00000472668.1

NPDC1-203, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 3

Gene NPDC1, Length 358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-203ENST00000472668 NISCHQ9Y2I1 1504 aa36.47■■■■□ 3.43
NPDC1-203ENST00000472668 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
NPDC1-203ENST00000472668 ABCC9O60706 1549 aa32.26■■■□□ 2.76
NPDC1-203ENST00000472668 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
NPDC1-203ENST00000472668 NACADO15069 1562 aa30.79■■■□□ 2.52
NPDC1-203ENST00000472668 MYO15BQ96JP2 1530 aa30.49■■■□□ 2.47
NPDC1-203ENST00000472668 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
NPDC1-203ENST00000472668 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
NPDC1-203ENST00000472668 UNC13AQ9UPW8 1703 aa30.28■■■□□ 2.44
NPDC1-203ENST00000472668 DCAF1Q9Y4B6 1507 aa30.19■■■□□ 2.42
NPDC1-203ENST00000472668 PABPN1Q86U42 306 aaKnown RBP eCLIP30.01■■■□□ 2.398e-6■□□□□ 8.9
NPDC1-203ENST00000472668 BICRAQ9NZM4 1560 aa30■■■□□ 2.39
NPDC1-203ENST00000472668 DNAJC5BQ9UF47 199 aa29.94■■■□□ 2.38
NPDC1-203ENST00000472668 SCRIBQ14160 1630 aa29.72■■■□□ 2.35
NPDC1-203ENST00000472668 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
NPDC1-203ENST00000472668 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
NPDC1-203ENST00000472668 CC2D2AQ9P2K1 1620 aa29.22■■■□□ 2.27
NPDC1-203ENST00000472668 CECR2Q9BXF3 1484 aa29.06■■■□□ 2.24
NPDC1-203ENST00000472668 SMARCA4P51532 1647 aa28.42■■■□□ 2.14
NPDC1-203ENST00000472668 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
NPDC1-203ENST00000472668 ATAD2BQ9ULI0 1458 aa28.33■■■□□ 2.13
NPDC1-203ENST00000472668 BAZ1AQ9NRL2 1556 aaPredicted RBP28.31■■■□□ 2.12
NPDC1-203ENST00000472668 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
NPDC1-203ENST00000472668 HMGXB3Q12766 1538 aa28.25■■■□□ 2.11
NPDC1-203ENST00000472668 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
NPDC1-203ENST00000472668 MROH2BQ7Z745 1585 aa28.08■■■□□ 2.09
NPDC1-203ENST00000472668 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.09
NPDC1-203ENST00000472668 ERCC6Q03468 1493 aa27.85■■■□□ 2.05
NPDC1-203ENST00000472668 NESP48681 1621 aa27.81■■■□□ 2.04
NPDC1-203ENST00000472668 WIZO95785 1651 aa27.78■■■□□ 2.04
NPDC1-203ENST00000472668 CUX2O14529 1486 aa27.76■■■□□ 2.03
NPDC1-203ENST00000472668 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
NPDC1-203ENST00000472668 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
NPDC1-203ENST00000472668 THOC2Q8NI27 1593 aaKnown RBP27.56■■■□□ 2
NPDC1-203ENST00000472668 KIF21AQ7Z4S6 1674 aa27.54■■■□□ 2
NPDC1-203ENST00000472668 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
NPDC1-203ENST00000472668 CADPSQ9ULU8 1353 aa27.5■■□□□ 1.99
NPDC1-203ENST00000472668 TOP2AP11388 1531 aaKnown RBP27.47■■□□□ 1.99
NPDC1-203ENST00000472668 DNAJC5Q9H3Z4 198 aa27.31■■□□□ 1.96
NPDC1-203ENST00000472668 CFTRP13569 1480 aa27.28■■□□□ 1.96
NPDC1-203ENST00000472668 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
NPDC1-203ENST00000472668 WDR62O43379 1518 aa27.24■■□□□ 1.95
NPDC1-203ENST00000472668 CEP164Q9UPV0 1460 aa27.22■■□□□ 1.95
NPDC1-203ENST00000472668 FANCD2Q9BXW9 1451 aa27.2■■□□□ 1.95
NPDC1-203ENST00000472668 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
NPDC1-203ENST00000472668 CCDC88BA6NC98 1476 aa27.11■■□□□ 1.93
NPDC1-203ENST00000472668 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
NPDC1-203ENST00000472668 TOPBP1Q92547 1522 aa26.74■■□□□ 1.87
NPDC1-203ENST00000472668 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
NPDC1-203ENST00000472668 DNMBPQ6XZF7 1577 aa26.7■■□□□ 1.86
NPDC1-203ENST00000472668 IFT140Q96RY7 1462 aa26.67■■□□□ 1.86
NPDC1-203ENST00000472668 ZNF608Q9ULD9 1512 aaPredicted RBP26.57■■□□□ 1.84
NPDC1-203ENST00000472668 TARBP1Q13395 1621 aaKnown RBP26.51■■□□□ 1.83
NPDC1-203ENST00000472668 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
NPDC1-203ENST00000472668 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
NPDC1-203ENST00000472668 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
NPDC1-203ENST00000472668 OSCARQ8IYS5 282 aa26.43■■□□□ 1.82
NPDC1-203ENST00000472668 CUX1P39880 1505 aa26.38■■□□□ 1.81
NPDC1-203ENST00000472668 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
NPDC1-203ENST00000472668 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.81
NPDC1-203ENST00000472668 RAD54L2Q9Y4B4 1467 aa26.34■■□□□ 1.81
NPDC1-203ENST00000472668 SOGA1O94964 1423 aa26.32■■□□□ 1.8
NPDC1-203ENST00000472668 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
NPDC1-203ENST00000472668 CHD1O14646 1710 aa26.26■■□□□ 1.79
NPDC1-203ENST00000472668 TDRD9Q8NDG6 1382 aaKnown RBP26.21■■□□□ 1.79
NPDC1-203ENST00000472668 TRIM41Q8WV44 630 aa26.18■■□□□ 1.78
NPDC1-203ENST00000472668 RIMBP3CA6NJZ7 1639 aa26.15■■□□□ 1.78
NPDC1-203ENST00000472668 RIMBP3BA6NNM3 1639 aa26.15■■□□□ 1.78
NPDC1-203ENST00000472668 RIMBP3Q9UFD9 1639 aa26.15■■□□□ 1.78
NPDC1-203ENST00000472668 SNAPC4Q5SXM2 1469 aa26.12■■□□□ 1.77
NPDC1-203ENST00000472668 GRIN2BQ13224 1484 aa26.1■■□□□ 1.77
NPDC1-203ENST00000472668 MAGI1Q96QZ7 1491 aaPredicted RBP26.1■■□□□ 1.77
NPDC1-203ENST00000472668 BIVM-ERCC5R4GMW8 1640 aa26.1■■□□□ 1.77
NPDC1-203ENST00000472668 ARHGEF11O15085 1522 aa26.09■■□□□ 1.77
NPDC1-203ENST00000472668 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
NPDC1-203ENST00000472668 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
NPDC1-203ENST00000472668 TOP2BQ02880 1626 aa26.07■■□□□ 1.76
NPDC1-203ENST00000472668 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
NPDC1-203ENST00000472668 FBLN2P98095 1184 aa26.04■■□□□ 1.76
NPDC1-203ENST00000472668 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.76
NPDC1-203ENST00000472668 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
NPDC1-203ENST00000472668 SYNJ1O43426 1573 aa26.03■■□□□ 1.76
NPDC1-203ENST00000472668 SYNJ2O15056 1496 aa25.99■■□□□ 1.75
NPDC1-203ENST00000472668 CLASP1Q7Z460 1538 aa25.95■■□□□ 1.74
NPDC1-203ENST00000472668 CHMP7Q8WUX9 453 aaPredicted RBP25.93■■□□□ 1.74
NPDC1-203ENST00000472668 ARAP1Q96P48 1450 aa25.85■■□□□ 1.73
NPDC1-203ENST00000472668 ADAMTS12P58397 1594 aa25.84■■□□□ 1.73
NPDC1-203ENST00000472668 ERICH3Q5RHP9 1530 aa25.78■■□□□ 1.72
NPDC1-203ENST00000472668 CYB5RLQ6IPT4 315 aa25.77■■□□□ 1.72
NPDC1-203ENST00000472668 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
NPDC1-203ENST00000472668 FHAD1B1AJZ9 1412 aa25.72■■□□□ 1.71
NPDC1-203ENST00000472668 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
NPDC1-203ENST00000472668 NUP160Q12769 1436 aa25.68■■□□□ 1.7
NPDC1-203ENST00000472668 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
NPDC1-203ENST00000472668 ERCC6L2Q5T890 1561 aa25.53■■□□□ 1.68
NPDC1-203ENST00000472668 KIF27Q86VH2 1401 aa25.52■■□□□ 1.68
NPDC1-203ENST00000472668 CUL7Q14999 1698 aa25.49■■□□□ 1.67
NPDC1-203ENST00000472668 RUSC2Q8N2Y8 1516 aa25.47■■□□□ 1.67
NPDC1-203ENST00000472668 IGF1RP08069 1367 aa25.44■■□□□ 1.66
NPDC1-203ENST00000472668 TRHP20396 242 aaPredicted RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms