Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17■□□□□ 0.313e-6■■■□□ 14.7
LARP4Q71RC2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.243e-6■■■□□ 14.7
LARP4Q71RC2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.39■□□□□ 0.213e-7■■■□□ 14.7
LARP4Q71RC2 CTTN-204ENST00000393747 1315 ntTSL 516.34■□□□□ 0.214e-10■■■□□ 14.7
LARP4Q71RC2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.27■□□□□ 0.23e-6■■■□□ 14.7
LARP4Q71RC2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.09■□□□□ 0.173e-14■■■□□ 14.7
LARP4Q71RC2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.02■□□□□ 0.163e-7■■■□□ 14.7
LARP4Q71RC2 CAPZB-207ENST00000459967 579 ntTSL 315.57■□□□□ 0.083e-7■■■□□ 14.7
LARP4Q71RC2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.054e-10■■■□□ 14.7
LARP4Q71RC2 CTTN-213ENST00000529736 952 ntTSL 314.59□□□□□ -0.074e-10■■■□□ 14.7
LARP4Q71RC2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.084e-10■■■□□ 14.7
LARP4Q71RC2 ELOVL1-203ENST00000464204 1034 ntTSL 1 (best)14.06□□□□□ -0.163e-7■■■□□ 14.7
LARP4Q71RC2 CAPZB-208ENST00000482808 660 ntTSL 213.99□□□□□ -0.173e-7■■■□□ 14.7
LARP4Q71RC2 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.244e-10■■■□□ 14.7
LARP4Q71RC2 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.333e-7■■■□□ 14.7
LARP4Q71RC2 SH3BP1-203ENST00000451997 3123 ntTSL 212.65□□□□□ -0.383e-7■■■□□ 14.7
LARP4Q71RC2 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.413e-7■■■□□ 14.7
LARP4Q71RC2 CHP1-201ENST00000334660 3329 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.543e-7■■■□□ 14.7
LARP4Q71RC2 SYVN1-206ENST00000526060 3144 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.593e-7■■■□□ 14.7
LARP4Q71RC2 SYVN1-204ENST00000449943 4547 ntTSL 211.32□□□□□ -0.63e-7■■■□□ 14.7
LARP4Q71RC2 CCT6A-203ENST00000462133 665 ntTSL 39.98□□□□□ -0.813e-6■■■□□ 14.7
LARP4Q71RC2 ELOVL1-205ENST00000468865 797 ntTSL 38.81□□□□□ -13e-7■■■□□ 14.7
LARP4Q71RC2 CCT6A-204ENST00000466479 745 ntTSL 28.11□□□□□ -1.113e-6■■■□□ 14.7
LARP4Q71RC2 CCT6A-209ENST00000494736 411 ntTSL 27.84□□□□□ -1.153e-6■■■□□ 14.7
LARP4Q71RC2 NUP160-209ENST00000530326 4811 ntAPPRIS ALT2 TSL 55.98□□□□□ -1.453e-7■■■□□ 14.7
LARP4Q71RC2 CNPY2-207ENST00000551276 556 ntTSL 517.8■□□□□ 0.446e-12■■■□□ 14.7
LARP4Q71RC2 CNPY2-205ENST00000547570 624 ntTSL 39.63□□□□□ -0.876e-12■■■□□ 14.7
LARP4Q71RC2 RABAC1-204ENST00000598057 662 nt16.4■□□□□ 0.221e-9■■■□□ 14.7
LARP4Q71RC2 RABAC1-202ENST00000595226 725 ntTSL 216.09■□□□□ 0.171e-9■■■□□ 14.7
LARP4Q71RC2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.318e-7■■■□□ 14.7
LARP4Q71RC2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.99■□□□□ 0.318e-7■■■□□ 14.7
LARP4Q71RC2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.99■□□□□ 0.318e-7■■■□□ 14.7
LARP4Q71RC2 DGUOK-203ENST00000418996 703 ntTSL 1 (best)15.55■□□□□ 0.088e-7■■■□□ 14.7
LARP4Q71RC2 DGUOK-205ENST00000462685 715 ntTSL 312.16□□□□□ -0.468e-7■■■□□ 14.7
LARP4Q71RC2 PSMA7-206ENST00000486193 548 ntTSL 24.93□□□□□ -1.624e-7■■■□□ 14.7
LARP4Q71RC2 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.81□□□□□ -0.363e-7■■■□□ 14.7
LARP4Q71RC2 RPS18-231ENST00000472218 1109 ntTSL 210.47□□□□□ -0.731e-21■■■□□ 14.7
LARP4Q71RC2 RNF181-202ENST00000414390 327 ntTSL 210.53□□□□□ -0.724e-7■■■□□ 14.7
LARP4Q71RC2 MICALL2-208ENST00000472100 5248 ntTSL 217.12■□□□□ 0.332e-6■■■□□ 14.7
LARP4Q71RC2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.232e-6■■■□□ 14.7
LARP4Q71RC2 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.76e-10■■■□□ 14.6
LARP4Q71RC2 CFB-284ENST00000498317 589 ntTSL 27.97□□□□□ -1.136e-10■■■□□ 14.6
LARP4Q71RC2 CFB-280ENST00000482312 764 ntTSL 27.97□□□□□ -1.136e-10■■■□□ 14.6
LARP4Q71RC2 CFB-282ENST00000483004 940 ntTSL 56.58□□□□□ -1.366e-10■■■□□ 14.6
LARP4Q71RC2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.261e-6■■■□□ 14.6
LARP4Q71RC2 CRIP2-211ENST00000552643 1383 ntTSL 223.01■■□□□ 1.271e-6■■■□□ 14.6
LARP4Q71RC2 CRIP2-204ENST00000547643 1373 ntTSL 321.22■□□□□ 0.991e-6■■■□□ 14.6
LARP4Q71RC2 CRIP2-205ENST00000548309 1893 ntTSL 1 (best)18.65■□□□□ 0.581e-6■■■□□ 14.6
LARP4Q71RC2 CRIP2-207ENST00000548989 1976 ntTSL 218.53■□□□□ 0.561e-6■■■□□ 14.6
LARP4Q71RC2 CRIP2-203ENST00000538259 991 ntTSL 217.26■□□□□ 0.351e-6■■■□□ 14.6
LARP4Q71RC2 CRIP2-208ENST00000550577 817 ntTSL 210.73□□□□□ -0.691e-6■■■□□ 14.6
LARP4Q71RC2 AL513165.2-201ENST00000544475 2999 ntTSL 1 (best)11.38□□□□□ -0.592e-11■■■□□ 14.6
LARP4Q71RC2 AL513165.2-202ENST00000541804 1514 ntTSL 1 (best)9.25□□□□□ -0.932e-11■■■□□ 14.6
LARP4Q71RC2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.062e-13■■■□□ 14.6
LARP4Q71RC2 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC10.89□□□□□ -0.672e-13■■■□□ 14.6
LARP4Q71RC2 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC10.32□□□□□ -0.762e-13■■■□□ 14.6
LARP4Q71RC2 LGALS1-204ENST00000464120 303 ntTSL 211.81□□□□□ -0.521e-7■■■□□ 14.6
LARP4Q71RC2 LGALS1-206ENST00000480207 185 ntTSL 58.2□□□□□ -1.11e-7■■■□□ 14.6
LARP4Q71RC2 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.43e-7■■■□□ 14.6
LARP4Q71RC2 ESYT1-206ENST00000550515 716 ntTSL 211.18□□□□□ -0.623e-7■■■□□ 14.6
LARP4Q71RC2 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.733e-7■■■□□ 14.6
LARP4Q71RC2 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.213e-7■■■□□ 14.6
LARP4Q71RC2 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.383e-7■■■□□ 14.6
LARP4Q71RC2 POLR2E-202ENST00000585838 487 ntTSL 510.11□□□□□ -0.792e-7■■■□□ 14.6
LARP4Q71RC2 PCOLCE-205ENST00000472348 960 ntTSL 215.25■□□□□ 0.032e-9■■■□□ 14.6
LARP4Q71RC2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.232e-9■■■□□ 14.6
LARP4Q71RC2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.432e-11■■■□□ 14.6
LARP4Q71RC2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.242e-11■■■□□ 14.6
LARP4Q71RC2 OAZ1-207ENST00000590943 1012 ntTSL 214.95□□□□□ -0.022e-11■■■□□ 14.6
LARP4Q71RC2 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.151e-7■■■□□ 14.6
LARP4Q71RC2 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.54□□□□□ -1.21e-7■■■□□ 14.6
LARP4Q71RC2 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.83□□□□□ -1.321e-7■■■□□ 14.6
LARP4Q71RC2 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.45□□□□□ -1.381e-7■■■□□ 14.6
LARP4Q71RC2 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.27□□□□□ -1.411e-7■■■□□ 14.6
LARP4Q71RC2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.09□□□□□ -0.316e-7■■■□□ 14.6
LARP4Q71RC2 YIPF3-208ENST00000490447 1321 ntTSL 216.13■□□□□ 0.173e-6■■■□□ 14.6
LARP4Q71RC2 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.271e-6■■■□□ 14.6
LARP4Q71RC2 GSE1-215ENST00000635906 666 ntTSL 312□□□□□ -0.491e-6■■■□□ 14.6
LARP4Q71RC2 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.18□□□□□ -1.261e-6■■■□□ 14.6
LARP4Q71RC2 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.97□□□□□ -1.291e-6■■■□□ 14.6
LARP4Q71RC2 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.341e-6■■■□□ 14.6
LARP4Q71RC2 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.62□□□□□ -1.351e-6■■■□□ 14.6
LARP4Q71RC2 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.45□□□□□ -1.71e-6■■■□□ 14.6
LARP4Q71RC2 FAM182B-203ENST00000424021 605 ntTSL 513.3□□□□□ -0.288e-11■■■□□ 14.6
LARP4Q71RC2 ABT1-201ENST00000274849 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.792e-6■■■□□ 14.6
LARP4Q71RC2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.127e-10■■■□□ 14.6
LARP4Q71RC2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.477e-7■■■□□ 14.6
LARP4Q71RC2 CALM3-205ENST00000486500 2536 ntTSL 212.73□□□□□ -0.377e-7■■■□□ 14.6
LARP4Q71RC2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.96e-7■■■□□ 14.6
LARP4Q71RC2 CDK4-208ENST00000551706 984 ntTSL 1 (best)16.01■□□□□ 0.156e-8■■■□□ 14.6
LARP4Q71RC2 CDK4-209ENST00000551800 773 ntTSL 515.54■□□□□ 0.086e-8■■■□□ 14.6
LARP4Q71RC2 COPS9-202ENST00000403160 609 ntTSL 215.53■□□□□ 0.086e-9■■■□□ 14.6
LARP4Q71RC2 CDK4-212ENST00000552388 694 ntTSL 312.25□□□□□ -0.456e-8■■■□□ 14.6
LARP4Q71RC2 CDK4-214ENST00000552862 447 ntTSL 311.36□□□□□ -0.596e-8■■■□□ 14.6
LARP4Q71RC2 RPL37A-201ENST00000359681 742 ntTSL 1 (best)16.26■□□□□ 0.192e-40■■■□□ 14.6
LARP4Q71RC2 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC10.59□□□□□ -0.712e-40■■■□□ 14.6
LARP4Q71RC2 RPL37A-202ENST00000420712 385 ntTSL 59.09□□□□□ -0.952e-40■■■□□ 14.6
LARP4Q71RC2 NEU1-208ENST00000491768 1875 ntTSL 519.13■□□□□ 0.651e-6■■□□□ 14.5
LARP4Q71RC2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.441e-6■■□□□ 14.5
LARP4Q71RC2 NEU1-207ENST00000480384 2214 ntTSL 217.58■□□□□ 0.41e-6■■□□□ 14.5
Retrieved 100 of 15,922 protein–RNA pairs in 371.1 ms