RNA–Protein interactions for RNA: ENST00000403160.4

COPS9-202, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-202ENST00000403160 NISCHQ9Y2I1 1504 aa38.85■■■■□ 3.81
COPS9-202ENST00000403160 CCDC180Q9P1Z9 1646 aa34.67■■■■□ 3.14
COPS9-202ENST00000403160 ABCC9O60706 1549 aa34.5■■■■□ 3.11
COPS9-202ENST00000403160 RB1CC1Q8TDY2 1594 aa32.88■■■□□ 2.85
COPS9-202ENST00000403160 NACADO15069 1562 aa32.67■■■□□ 2.82
COPS9-202ENST00000403160 DCAF8L2P0C7V8 631 aa32.62■■■□□ 2.81
COPS9-202ENST00000403160 DNAJC5BQ9UF47 199 aa32.39■■■□□ 2.78
COPS9-202ENST00000403160 MYO15BQ96JP2 1530 aa32.35■■■□□ 2.77
COPS9-202ENST00000403160 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
COPS9-202ENST00000403160 PABPN1Q86U42 306 aaKnown RBP eCLIP32.14■■■□□ 2.74
COPS9-202ENST00000403160 DCAF1Q9Y4B6 1507 aa32.12■■■□□ 2.73
COPS9-202ENST00000403160 UNC13AQ9UPW8 1703 aa32.04■■■□□ 2.72
COPS9-202ENST00000403160 BICRAQ9NZM4 1560 aa31.86■■■□□ 2.69
COPS9-202ENST00000403160 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
COPS9-202ENST00000403160 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
COPS9-202ENST00000403160 CC2D2AQ9P2K1 1620 aa31.17■■■□□ 2.58
COPS9-202ENST00000403160 EIF4G1Q04637 1599 aaKnown RBP31.11■■■□□ 2.57
COPS9-202ENST00000403160 CECR2Q9BXF3 1484 aa31.11■■■□□ 2.57
COPS9-202ENST00000403160 SMARCA4P51532 1647 aa30.22■■■□□ 2.43
COPS9-202ENST00000403160 NCAPD3P42695 1498 aa30.18■■■□□ 2.42
COPS9-202ENST00000403160 BAZ1AQ9NRL2 1556 aaPredicted RBP30.15■■■□□ 2.42
COPS9-202ENST00000403160 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
COPS9-202ENST00000403160 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
COPS9-202ENST00000403160 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
COPS9-202ENST00000403160 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
COPS9-202ENST00000403160 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
COPS9-202ENST00000403160 BAZ1BQ9UIG0 1483 aaKnown RBP29.87■■■□□ 2.37
COPS9-202ENST00000403160 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
COPS9-202ENST00000403160 ERCC6Q03468 1493 aa29.82■■■□□ 2.36
COPS9-202ENST00000403160 CUX2O14529 1486 aa29.8■■■□□ 2.36
COPS9-202ENST00000403160 WIZO95785 1651 aa29.62■■■□□ 2.33
COPS9-202ENST00000403160 NESP48681 1621 aa29.61■■■□□ 2.33
COPS9-202ENST00000403160 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
COPS9-202ENST00000403160 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
COPS9-202ENST00000403160 PDS5BQ9NTI5 1447 aa29.34■■■□□ 2.29
COPS9-202ENST00000403160 THOC2Q8NI27 1593 aaKnown RBP29.31■■■□□ 2.28
COPS9-202ENST00000403160 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
COPS9-202ENST00000403160 CADPSQ9ULU8 1353 aa29.26■■■□□ 2.28
COPS9-202ENST00000403160 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
COPS9-202ENST00000403160 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
COPS9-202ENST00000403160 CFTRP13569 1480 aa29■■■□□ 2.23
COPS9-202ENST00000403160 WDR62O43379 1518 aa28.94■■■□□ 2.22
COPS9-202ENST00000403160 CCDC88BA6NC98 1476 aa28.93■■■□□ 2.22
COPS9-202ENST00000403160 CEP164Q9UPV0 1460 aa28.92■■■□□ 2.22
COPS9-202ENST00000403160 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
COPS9-202ENST00000403160 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
COPS9-202ENST00000403160 URB2Q14146 1524 aaKnown RBP28.63■■■□□ 2.17
COPS9-202ENST00000403160 SUPT5HO00267 1087 aaKnown RBP28.61■■■□□ 2.17
COPS9-202ENST00000403160 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
COPS9-202ENST00000403160 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
COPS9-202ENST00000403160 TOPBP1Q92547 1522 aa28.42■■■□□ 2.14
COPS9-202ENST00000403160 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
COPS9-202ENST00000403160 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
COPS9-202ENST00000403160 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
COPS9-202ENST00000403160 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.11
COPS9-202ENST00000403160 POLA1P09884 1462 aaPredicted RBP28.15■■■□□ 2.1
COPS9-202ENST00000403160 TARBP1Q13395 1621 aaKnown RBP28.12■■■□□ 2.09
COPS9-202ENST00000403160 CUX1P39880 1505 aa28.1■■■□□ 2.09
COPS9-202ENST00000403160 EIF4G3O43432 1585 aaKnown RBP28.09■■■□□ 2.09
COPS9-202ENST00000403160 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
COPS9-202ENST00000403160 SOGA1O94964 1423 aa28.05■■■□□ 2.08
COPS9-202ENST00000403160 RAD54L2Q9Y4B4 1467 aa28.04■■■□□ 2.08
COPS9-202ENST00000403160 AQRO60306 1485 aaKnown RBP eCLIP28.03■■■□□ 2.08
COPS9-202ENST00000403160 RIMBP3CA6NJZ7 1639 aa28■■■□□ 2.07
COPS9-202ENST00000403160 RIMBP3BA6NNM3 1639 aa28■■■□□ 2.07
COPS9-202ENST00000403160 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
COPS9-202ENST00000403160 ARHGEF11O15085 1522 aa27.93■■■□□ 2.06
COPS9-202ENST00000403160 TDRD9Q8NDG6 1382 aaKnown RBP27.92■■■□□ 2.06
COPS9-202ENST00000403160 FBLN2P98095 1184 aa27.9■■■□□ 2.06
COPS9-202ENST00000403160 WDR97A6NE52 1622 aa27.89■■■□□ 2.06
COPS9-202ENST00000403160 CHD1O14646 1710 aa27.87■■■□□ 2.05
COPS9-202ENST00000403160 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
COPS9-202ENST00000403160 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
COPS9-202ENST00000403160 BIVM-ERCC5R4GMW8 1640 aa27.8■■■□□ 2.04
COPS9-202ENST00000403160 CYB5RLQ6IPT4 315 aa27.79■■■□□ 2.04
COPS9-202ENST00000403160 SYNJ1O43426 1573 aa27.78■■■□□ 2.04
COPS9-202ENST00000403160 ABCA10Q8WWZ4 1543 aa27.77■■■□□ 2.04
COPS9-202ENST00000403160 GRIN2BQ13224 1484 aa27.75■■■□□ 2.03
COPS9-202ENST00000403160 SNAPC4Q5SXM2 1469 aa27.75■■■□□ 2.03
COPS9-202ENST00000403160 GAPVD1Q14C86 1478 aa27.72■■■□□ 2.03
COPS9-202ENST00000403160 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
COPS9-202ENST00000403160 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.03
COPS9-202ENST00000403160 PBRM1Q86U86 1689 aa27.69■■■□□ 2.02
COPS9-202ENST00000403160 ABCA5Q8WWZ7 1642 aa27.68■■■□□ 2.02
COPS9-202ENST00000403160 ARAP1Q96P48 1450 aa27.64■■■□□ 2.02
COPS9-202ENST00000403160 SYNJ2O15056 1496 aa27.61■■■□□ 2.01
COPS9-202ENST00000403160 CLASP1Q7Z460 1538 aa27.58■■■□□ 2.01
COPS9-202ENST00000403160 TRHP20396 242 aaPredicted RBP27.49■■□□□ 1.99
COPS9-202ENST00000403160 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
COPS9-202ENST00000403160 ERICH3Q5RHP9 1530 aa27.44■■□□□ 1.98
COPS9-202ENST00000403160 GRIN2AQ12879 1464 aa27.39■■□□□ 1.98
COPS9-202ENST00000403160 FHAD1B1AJZ9 1412 aa27.38■■□□□ 1.97
COPS9-202ENST00000403160 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
COPS9-202ENST00000403160 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
COPS9-202ENST00000403160 CEP170Q5SW79 1584 aa27.26■■□□□ 1.96
COPS9-202ENST00000403160 NUP160Q12769 1436 aa27.26■■□□□ 1.95
COPS9-202ENST00000403160 IGF1RP08069 1367 aa27.18■■□□□ 1.94
COPS9-202ENST00000403160 CUL7Q14999 1698 aa27.16■■□□□ 1.94
COPS9-202ENST00000403160 ERCC6L2Q5T890 1561 aa27.11■■□□□ 1.93
COPS9-202ENST00000403160 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms