RNA–Protein interactions for RNA: ENST00000486500.1

CALM3-205, Transcript of calmodulin 3, humanhuman

TSL 2

Gene CALM3, Length 2,536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-205ENST00000486500 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.7
CALM3-205ENST00000486500 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
CALM3-205ENST00000486500 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
CALM3-205ENST00000486500 SUPT5HO00267 1087 aaKnown RBP21.7■■□□□ 1.06
CALM3-205ENST00000486500 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
CALM3-205ENST00000486500 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
CALM3-205ENST00000486500 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
CALM3-205ENST00000486500 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
CALM3-205ENST00000486500 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
CALM3-205ENST00000486500 HRCP23327 699 aa20.99■□□□□ 0.95
CALM3-205ENST00000486500 PCGF6Q9BYE7 350 aa20.8■□□□□ 0.92
CALM3-205ENST00000486500 LOC105371045A0A1W2PR82 267 aa20.6■□□□□ 0.89
CALM3-205ENST00000486500 ABCC9O60706 1549 aa20.54■□□□□ 0.88
CALM3-205ENST00000486500 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
CALM3-205ENST00000486500 TRIM26Q12899 539 aaPredicted RBP20.39■□□□□ 0.85
CALM3-205ENST00000486500 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
CALM3-205ENST00000486500 SCRIBQ14160 1630 aa20.34■□□□□ 0.85
CALM3-205ENST00000486500 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
CALM3-205ENST00000486500 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.82
CALM3-205ENST00000486500 ZEB1P37275 1124 aaPredicted RBP20.07■□□□□ 0.8
CALM3-205ENST00000486500 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
CALM3-205ENST00000486500 NACADO15069 1562 aa20.01■□□□□ 0.79
CALM3-205ENST00000486500 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
CALM3-205ENST00000486500 MROH2BQ7Z745 1585 aa19.94■□□□□ 0.78
CALM3-205ENST00000486500 WIZO95785 1651 aa19.84■□□□□ 0.77
CALM3-205ENST00000486500 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.76
CALM3-205ENST00000486500 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
CALM3-205ENST00000486500 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
CALM3-205ENST00000486500 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
CALM3-205ENST00000486500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
CALM3-205ENST00000486500 CCER1Q8TC90 406 aaPredicted RBP19.48■□□□□ 0.71
CALM3-205ENST00000486500 SMARCA4P51532 1647 aa19.47■□□□□ 0.71
CALM3-205ENST00000486500 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
CALM3-205ENST00000486500 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
CALM3-205ENST00000486500 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
CALM3-205ENST00000486500 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.75e-9■□□□□ 10.3
CALM3-205ENST00000486500 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
CALM3-205ENST00000486500 PELP1Q8IZL8 1130 aaKnown RBP19.39■□□□□ 0.69
CALM3-205ENST00000486500 CEP162Q5TB80 1403 aa19.38■□□□□ 0.69
CALM3-205ENST00000486500 TNIKQ9UKE5 1360 aa19.36■□□□□ 0.69
CALM3-205ENST00000486500 SOGA1O94964 1423 aa19.35■□□□□ 0.69
CALM3-205ENST00000486500 UNC13AQ9UPW8 1703 aa19.33■□□□□ 0.68
CALM3-205ENST00000486500 EEA1Q15075 1411 aa19.33■□□□□ 0.68
CALM3-205ENST00000486500 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
CALM3-205ENST00000486500 TTBK1Q5TCY1 1321 aaPredicted RBP19.26■□□□□ 0.67
CALM3-205ENST00000486500 RUSC2Q8N2Y8 1516 aa19.23■□□□□ 0.67
CALM3-205ENST00000486500 UBTFP17480 764 aaKnown RBP19.23■□□□□ 0.67
CALM3-205ENST00000486500 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
CALM3-205ENST00000486500 ACIN1Q9UKV3 1341 aaKnown RBP19.23■□□□□ 0.67
CALM3-205ENST00000486500 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
CALM3-205ENST00000486500 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
CALM3-205ENST00000486500 PEG3Q9GZU2 1588 aa19.1■□□□□ 0.65
CALM3-205ENST00000486500 CENPBP07199 599 aaPredicted RBP19.1■□□□□ 0.65
CALM3-205ENST00000486500 BICRAQ9NZM4 1560 aa19.08■□□□□ 0.65
CALM3-205ENST00000486500 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
CALM3-205ENST00000486500 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
CALM3-205ENST00000486500 ZNF316A6NFI3 1004 aaPredicted RBP19.04■□□□□ 0.64
CALM3-205ENST00000486500 KIF21BO75037 1637 aa19.03■□□□□ 0.64
CALM3-205ENST00000486500 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
CALM3-205ENST00000486500 GTF3C3Q9Y5Q9 886 aa18.99■□□□□ 0.63
CALM3-205ENST00000486500 CLIP1P30622 1438 aa18.98■□□□□ 0.63
CALM3-205ENST00000486500 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
CALM3-205ENST00000486500 ATAD2BQ9ULI0 1458 aa18.93■□□□□ 0.62
CALM3-205ENST00000486500 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
CALM3-205ENST00000486500 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
CALM3-205ENST00000486500 APLP2Q06481 763 aa18.88■□□□□ 0.61
CALM3-205ENST00000486500 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
CALM3-205ENST00000486500 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
CALM3-205ENST00000486500 MIER1Q8N108 512 aa18.77■□□□□ 0.6
CALM3-205ENST00000486500 YTHDC1Q96MU7 727 aaKnown RBP18.75■□□□□ 0.59
CALM3-205ENST00000486500 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
CALM3-205ENST00000486500 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
CALM3-205ENST00000486500 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.59
CALM3-205ENST00000486500 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
CALM3-205ENST00000486500 PRXQ9BXM0 1461 aa18.68■□□□□ 0.58
CALM3-205ENST00000486500 CLSPNQ9HAW4 1339 aa18.67■□□□□ 0.58
CALM3-205ENST00000486500 ARAP1Q96P48 1450 aa18.63■□□□□ 0.57
CALM3-205ENST00000486500 MYT1Q01538 1121 aa18.62■□□□□ 0.57
CALM3-205ENST00000486500 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
CALM3-205ENST00000486500 KANK4Q5T7N3 995 aaPredicted RBP18.57■□□□□ 0.56
CALM3-205ENST00000486500 CUX1P39880 1505 aa18.54■□□□□ 0.56
CALM3-205ENST00000486500 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
CALM3-205ENST00000486500 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
CALM3-205ENST00000486500 NCAPD3P42695 1498 aa18.53■□□□□ 0.56
CALM3-205ENST00000486500 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
CALM3-205ENST00000486500 CUX2O14529 1486 aa18.46■□□□□ 0.55
CALM3-205ENST00000486500 CFTRP13569 1480 aa18.44■□□□□ 0.54
CALM3-205ENST00000486500 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
CALM3-205ENST00000486500 ARHGAP35Q9NRY4 1499 aa18.44■□□□□ 0.54
CALM3-205ENST00000486500 ITGAEP38570 1179 aa18.33■□□□□ 0.52
CALM3-205ENST00000486500 IGF1RP08069 1367 aa18.32■□□□□ 0.52
CALM3-205ENST00000486500 MAP3K1Q13233 1512 aa18.31■□□□□ 0.52
CALM3-205ENST00000486500 RAB3GAP2Q9H2M9 1393 aa18.29■□□□□ 0.52
CALM3-205ENST00000486500 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
CALM3-205ENST00000486500 TIAM1Q13009 1591 aa18.28■□□□□ 0.52
CALM3-205ENST00000486500 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
CALM3-205ENST00000486500 CARMIL1Q5VZK9 1371 aa18.24■□□□□ 0.51
CALM3-205ENST00000486500 MAPKBP1O60336 1514 aa18.24■□□□□ 0.51
CALM3-205ENST00000486500 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
CALM3-205ENST00000486500 LRRC9Q6ZRR7 1453 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms