RNA–Protein interactions for RNA: ENST00000334660.9

CHP1-201, Transcript of calcineurin like EF-hand protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHP1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHP1-201ENST00000334660 NISCHQ9Y2I1 1504 aa24.02■■□□□ 1.44
CHP1-201ENST00000334660 SHROOM4Q9ULL8 1493 aa20.59■□□□□ 0.89
CHP1-201ENST00000334660 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
CHP1-201ENST00000334660 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
CHP1-201ENST00000334660 SUPT5HO00267 1087 aaKnown RBP20.24■□□□□ 0.83
CHP1-201ENST00000334660 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
CHP1-201ENST00000334660 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
CHP1-201ENST00000334660 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
CHP1-201ENST00000334660 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
CHP1-201ENST00000334660 ABCC9O60706 1549 aa19.13■□□□□ 0.65
CHP1-201ENST00000334660 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
CHP1-201ENST00000334660 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
CHP1-201ENST00000334660 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
CHP1-201ENST00000334660 HRCP23327 699 aa19.09■□□□□ 0.65
CHP1-201ENST00000334660 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
CHP1-201ENST00000334660 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
CHP1-201ENST00000334660 NACADO15069 1562 aa18.84■□□□□ 0.61
CHP1-201ENST00000334660 RB1CC1Q8TDY2 1594 aa18.8■□□□□ 0.6
CHP1-201ENST00000334660 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
CHP1-201ENST00000334660 TRIM26Q12899 539 aaPredicted RBP18.72■□□□□ 0.59
CHP1-201ENST00000334660 PPARGC1BQ86YN6 1023 aaKnown RBP18.71■□□□□ 0.59
CHP1-201ENST00000334660 FAM9AQ8IZU1 332 aaPredicted RBP18.71■□□□□ 0.59
CHP1-201ENST00000334660 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
CHP1-201ENST00000334660 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
CHP1-201ENST00000334660 WIZO95785 1651 aa18.55■□□□□ 0.56
CHP1-201ENST00000334660 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
CHP1-201ENST00000334660 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
CHP1-201ENST00000334660 EIF4G1Q04637 1599 aaKnown RBP18.26■□□□□ 0.51
CHP1-201ENST00000334660 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
CHP1-201ENST00000334660 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
CHP1-201ENST00000334660 CCDC88BA6NC98 1476 aa18.24■□□□□ 0.51
CHP1-201ENST00000334660 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
CHP1-201ENST00000334660 ABCC8Q09428 1581 aa18.18■□□□□ 0.5
CHP1-201ENST00000334660 SMARCA2P51531 1590 aa18.16■□□□□ 0.5
CHP1-201ENST00000334660 UNC13AQ9UPW8 1703 aa18.16■□□□□ 0.5
CHP1-201ENST00000334660 SOGA1O94964 1423 aa18.06■□□□□ 0.48
CHP1-201ENST00000334660 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
CHP1-201ENST00000334660 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
CHP1-201ENST00000334660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
CHP1-201ENST00000334660 CEP162Q5TB80 1403 aa17.98■□□□□ 0.47
CHP1-201ENST00000334660 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
CHP1-201ENST00000334660 UBTFP17480 764 aaKnown RBP17.96■□□□□ 0.47
CHP1-201ENST00000334660 RUSC2Q8N2Y8 1516 aa17.95■□□□□ 0.46
CHP1-201ENST00000334660 TNIKQ9UKE5 1360 aa17.95■□□□□ 0.46
CHP1-201ENST00000334660 CCER1Q8TC90 406 aaPredicted RBP17.95■□□□□ 0.46
CHP1-201ENST00000334660 WRNQ14191 1432 aaPredicted RBP eCLIP17.94■□□□□ 0.46
CHP1-201ENST00000334660 EEA1Q15075 1411 aa17.94■□□□□ 0.46
CHP1-201ENST00000334660 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
CHP1-201ENST00000334660 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.44
CHP1-201ENST00000334660 GOLGA3Q08378 1498 aa17.82■□□□□ 0.44
CHP1-201ENST00000334660 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
CHP1-201ENST00000334660 SYNJ1O43426 1573 aa17.76■□□□□ 0.43
CHP1-201ENST00000334660 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
CHP1-201ENST00000334660 CLIP1P30622 1438 aa17.65■□□□□ 0.42
CHP1-201ENST00000334660 KIF21BO75037 1637 aa17.64■□□□□ 0.41
CHP1-201ENST00000334660 RANGAP1P46060 587 aaPredicted RBP17.62■□□□□ 0.41
CHP1-201ENST00000334660 RAPGEF2Q9Y4G8 1499 aa17.6■□□□□ 0.41
CHP1-201ENST00000334660 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
CHP1-201ENST00000334660 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
CHP1-201ENST00000334660 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
CHP1-201ENST00000334660 APLP2Q06481 763 aa17.57■□□□□ 0.4
CHP1-201ENST00000334660 VPS8Q8N3P4 1428 aa17.56■□□□□ 0.4
CHP1-201ENST00000334660 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
CHP1-201ENST00000334660 PELP1Q8IZL8 1130 aaKnown RBP17.5■□□□□ 0.39
CHP1-201ENST00000334660 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
CHP1-201ENST00000334660 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
CHP1-201ENST00000334660 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
CHP1-201ENST00000334660 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
CHP1-201ENST00000334660 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
CHP1-201ENST00000334660 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
CHP1-201ENST00000334660 PRXQ9BXM0 1461 aa17.41■□□□□ 0.38
CHP1-201ENST00000334660 CUX1P39880 1505 aa17.38■□□□□ 0.37
CHP1-201ENST00000334660 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
CHP1-201ENST00000334660 KIF27Q86VH2 1401 aa17.35■□□□□ 0.37
CHP1-201ENST00000334660 CENPBP07199 599 aaPredicted RBP17.35■□□□□ 0.37
CHP1-201ENST00000334660 CFTRP13569 1480 aa17.35■□□□□ 0.37
CHP1-201ENST00000334660 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
CHP1-201ENST00000334660 KANK4Q5T7N3 995 aaPredicted RBP17.31■□□□□ 0.36
CHP1-201ENST00000334660 GTF3C3Q9Y5Q9 886 aa17.25■□□□□ 0.35
CHP1-201ENST00000334660 MIER1Q8N108 512 aa17.21■□□□□ 0.35
CHP1-201ENST00000334660 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
CHP1-201ENST00000334660 IGF1RP08069 1367 aa17.18■□□□□ 0.34
CHP1-201ENST00000334660 CUX2O14529 1486 aa17.18■□□□□ 0.34
CHP1-201ENST00000334660 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
CHP1-201ENST00000334660 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
CHP1-201ENST00000334660 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
CHP1-201ENST00000334660 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
CHP1-201ENST00000334660 RRBP1Q9P2E9 1410 aaKnown RBP17.14■□□□□ 0.34
CHP1-201ENST00000334660 ITGAEP38570 1179 aa17.11■□□□□ 0.33
CHP1-201ENST00000334660 CARMIL1Q5VZK9 1371 aa17.11■□□□□ 0.33
CHP1-201ENST00000334660 CCNB3Q8WWL7 1395 aa17.11■□□□□ 0.33
CHP1-201ENST00000334660 FGD5Q6ZNL6 1462 aa17.08■□□□□ 0.32
CHP1-201ENST00000334660 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
CHP1-201ENST00000334660 P3H3Q8IVL6 736 aa17■□□□□ 0.31
CHP1-201ENST00000334660 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
CHP1-201ENST00000334660 CC2D2AQ9P2K1 1620 aa16.98■□□□□ 0.31
CHP1-201ENST00000334660 ATP1B4Q9UN42 357 aaPredicted RBP16.97■□□□□ 0.31
CHP1-201ENST00000334660 TIAM1Q13009 1591 aa16.96■□□□□ 0.31
CHP1-201ENST00000334660 RAB3GAP2Q9H2M9 1393 aa16.95■□□□□ 0.3
CHP1-201ENST00000334660 MAP3K1Q13233 1512 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms