RNA–Protein interactions for RNA: ENST00000472218.1

RPS18-231, Transcript of ribosomal protein S18, humanhuman

TSL 2

Gene RPS18, Length 1,109 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS18-231ENST00000472218 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
RPS18-231ENST00000472218 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
RPS18-231ENST00000472218 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
RPS18-231ENST00000472218 ABCC9O60706 1549 aa20.67■□□□□ 0.9
RPS18-231ENST00000472218 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
RPS18-231ENST00000472218 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
RPS18-231ENST00000472218 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
RPS18-231ENST00000472218 NACADO15069 1562 aa20.34■□□□□ 0.85
RPS18-231ENST00000472218 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
RPS18-231ENST00000472218 SHROOM4Q9ULL8 1493 aa19.88■□□□□ 0.77
RPS18-231ENST00000472218 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
RPS18-231ENST00000472218 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
RPS18-231ENST00000472218 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
RPS18-231ENST00000472218 PABPN1Q86U42 306 aaKnown RBP eCLIP19.35■□□□□ 0.69
RPS18-231ENST00000472218 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
RPS18-231ENST00000472218 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
RPS18-231ENST00000472218 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
RPS18-231ENST00000472218 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
RPS18-231ENST00000472218 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
RPS18-231ENST00000472218 MROH2BQ7Z745 1585 aa19.07■□□□□ 0.64
RPS18-231ENST00000472218 SMARCA4P51532 1647 aa19.05■□□□□ 0.64
RPS18-231ENST00000472218 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
RPS18-231ENST00000472218 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
RPS18-231ENST00000472218 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
RPS18-231ENST00000472218 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
RPS18-231ENST00000472218 WIZO95785 1651 aa18.83■□□□□ 0.61
RPS18-231ENST00000472218 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
RPS18-231ENST00000472218 NCAPD3P42695 1498 aa18.77■□□□□ 0.6
RPS18-231ENST00000472218 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
RPS18-231ENST00000472218 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
RPS18-231ENST00000472218 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
RPS18-231ENST00000472218 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
RPS18-231ENST00000472218 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
RPS18-231ENST00000472218 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
RPS18-231ENST00000472218 CFTRP13569 1480 aa18.28■□□□□ 0.52
RPS18-231ENST00000472218 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
RPS18-231ENST00000472218 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
RPS18-231ENST00000472218 LAMC3Q9Y6N6 1575 aa18.11■□□□□ 0.49
RPS18-231ENST00000472218 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.485e-25■□□□□ 8.1
RPS18-231ENST00000472218 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
RPS18-231ENST00000472218 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
RPS18-231ENST00000472218 FANCD2Q9BXW9 1451 aa17.99■□□□□ 0.47
RPS18-231ENST00000472218 NESP48681 1621 aa17.98■□□□□ 0.47
RPS18-231ENST00000472218 ABCC8Q09428 1581 aa17.98■□□□□ 0.47
RPS18-231ENST00000472218 TOP2BQ02880 1626 aa17.91■□□□□ 0.46
RPS18-231ENST00000472218 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
RPS18-231ENST00000472218 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
RPS18-231ENST00000472218 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
RPS18-231ENST00000472218 CUX1P39880 1505 aa17.86■□□□□ 0.45
RPS18-231ENST00000472218 EEA1Q15075 1411 aa17.85■□□□□ 0.45
RPS18-231ENST00000472218 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
RPS18-231ENST00000472218 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
RPS18-231ENST00000472218 TOPBP1Q92547 1522 aa17.77■□□□□ 0.43
RPS18-231ENST00000472218 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.43
RPS18-231ENST00000472218 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
RPS18-231ENST00000472218 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
RPS18-231ENST00000472218 FGD5Q6ZNL6 1462 aa17.7■□□□□ 0.42
RPS18-231ENST00000472218 THOC2Q8NI27 1593 aaKnown RBP17.69■□□□□ 0.42
RPS18-231ENST00000472218 SOGA1O94964 1423 aa17.68■□□□□ 0.42
RPS18-231ENST00000472218 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
RPS18-231ENST00000472218 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
RPS18-231ENST00000472218 POLA1P09884 1462 aaPredicted RBP17.66■□□□□ 0.42
RPS18-231ENST00000472218 WDR62O43379 1518 aa17.66■□□□□ 0.42
RPS18-231ENST00000472218 ABCA10Q8WWZ4 1543 aa17.63■□□□□ 0.41
RPS18-231ENST00000472218 CUX2O14529 1486 aa17.59■□□□□ 0.41
RPS18-231ENST00000472218 FAM9AQ8IZU1 332 aaPredicted RBP17.59■□□□□ 0.41
RPS18-231ENST00000472218 RUSC2Q8N2Y8 1516 aa17.57■□□□□ 0.4
RPS18-231ENST00000472218 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
RPS18-231ENST00000472218 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
RPS18-231ENST00000472218 WDR97A6NE52 1622 aa17.51■□□□□ 0.39
RPS18-231ENST00000472218 IGF1RP08069 1367 aa17.5■□□□□ 0.39
RPS18-231ENST00000472218 PRXQ9BXM0 1461 aa17.5■□□□□ 0.39
RPS18-231ENST00000472218 KIF21BO75037 1637 aa17.49■□□□□ 0.39
RPS18-231ENST00000472218 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
RPS18-231ENST00000472218 LOC105371045A0A1W2PR82 267 aa17.48■□□□□ 0.39
RPS18-231ENST00000472218 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
RPS18-231ENST00000472218 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
RPS18-231ENST00000472218 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
RPS18-231ENST00000472218 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
RPS18-231ENST00000472218 ABCA5Q8WWZ7 1642 aa17.42■□□□□ 0.38
RPS18-231ENST00000472218 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
RPS18-231ENST00000472218 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
RPS18-231ENST00000472218 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
RPS18-231ENST00000472218 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
RPS18-231ENST00000472218 CUL7Q14999 1698 aa17.36■□□□□ 0.37
RPS18-231ENST00000472218 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
RPS18-231ENST00000472218 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.369e-21■■■■■ 40.7
RPS18-231ENST00000472218 ZNF608Q9ULD9 1512 aaPredicted RBP17.3■□□□□ 0.36
RPS18-231ENST00000472218 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
RPS18-231ENST00000472218 MAGI1Q96QZ7 1491 aaPredicted RBP17.25■□□□□ 0.35
RPS18-231ENST00000472218 EIF4G3O43432 1585 aaKnown RBP17.24■□□□□ 0.35
RPS18-231ENST00000472218 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
RPS18-231ENST00000472218 PBRM1Q86U86 1689 aa17.22■□□□□ 0.35
RPS18-231ENST00000472218 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
RPS18-231ENST00000472218 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
RPS18-231ENST00000472218 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
RPS18-231ENST00000472218 SYNJ2O15056 1496 aa17.17■□□□□ 0.34
RPS18-231ENST00000472218 CLIP1P30622 1438 aa17.16■□□□□ 0.34
RPS18-231ENST00000472218 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
RPS18-231ENST00000472218 CHMP7Q8WUX9 453 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms