Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC8.26□□□□□ -1.092e-10■■□□□ 14.5
NCBP2P52298 B3GALNT2-207ENST00000612859 2920 ntTSL 58.23□□□□□ -1.093e-7■■□□□ 14.5
NCBP2P52298 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.13e-7■■□□□ 14.5
NCBP2P52298 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC8.05□□□□□ -1.123e-7■■□□□ 14.5
NCBP2P52298 AP003108.2-203ENST00000536670 449 ntTSL 57.96□□□□□ -1.143e-7■■□□□ 14.5
NCBP2P52298 AP003108.2-205ENST00000538594 569 ntTSL 47.84□□□□□ -1.153e-7■■□□□ 14.5
NCBP2P52298 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.69□□□□□ -1.182e-10■■□□□ 14.5
NCBP2P52298 ENTPD1-AS1-205ENST00000444375 617 ntTSL 37.45□□□□□ -1.222e-10■■□□□ 14.5
NCBP2P52298 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.292e-10■■□□□ 14.5
NCBP2P52298 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.313e-7■■□□□ 14.5
NCBP2P52298 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.99□□□□□ -1.452e-10■■□□□ 14.5
NCBP2P52298 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.76□□□□□ -1.492e-10■■□□□ 14.5
NCBP2P52298 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.66□□□□□ -1.52e-10■■□□□ 14.5
NCBP2P52298 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.34□□□□□ -1.552e-10■■□□□ 14.5
NCBP2P52298 ENTPD1-AS1-208ENST00000451364 716 ntTSL 25.34□□□□□ -1.552e-10■■□□□ 14.5
NCBP2P52298 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.632e-10■■□□□ 14.5
NCBP2P52298 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.73□□□□□ -1.653e-7■■□□□ 14.5
NCBP2P52298 SDHAF2-202ENST00000359614 555 ntTSL 34.22□□□□□ -1.733e-7■■□□□ 14.5
NCBP2P52298 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.26□□□□□ -1.893e-7■■□□□ 14.5
NCBP2P52298 MAP4K5-206ENST00000555216 592 ntTSL 42.7□□□□□ -1.983e-7■■□□□ 14.5
NCBP2P52298 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.44□□□□□ -2.023e-7■■□□□ 14.5
NCBP2P52298 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.278e-7■■□□□ 14.5
NCBP2P52298 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.722e-8■■□□□ 14.5
NCBP2P52298 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.59■■□□□ 1.692e-8■■□□□ 14.5
NCBP2P52298 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.33■■□□□ 1.652e-8■■□□□ 14.5
NCBP2P52298 FTCD-212ENST00000498355 1936 ntTSL 225.2■■□□□ 1.622e-8■■□□□ 14.5
NCBP2P52298 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.462e-8■■□□□ 14.5
NCBP2P52298 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.75■□□□□ 0.913e-7■■□□□ 14.5
NCBP2P52298 LINC01881-207ENST00000622435 555 ntTSL 519.75■□□□□ 0.753e-7■■□□□ 14.5
NCBP2P52298 LINC01881-204ENST00000444990 557 ntTSL 318.48■□□□□ 0.553e-7■■□□□ 14.5
NCBP2P52298 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.34■□□□□ 0.533e-7■■□□□ 14.5
NCBP2P52298 LINC01881-202ENST00000431796 565 ntTSL 415.81■□□□□ 0.123e-7■■□□□ 14.5
NCBP2P52298 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.899e-11■■□□□ 14.5
NCBP2P52298 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.59■■□□□ 1.058e-11■■□□□ 14.5
NCBP2P52298 STK32C-203ENST00000368620 830 ntTSL 320.35■□□□□ 0.858e-11■■□□□ 14.5
NCBP2P52298 SEPT9-218ENST00000587514 540 ntTSL 520.13■□□□□ 0.812e-6■■□□□ 14.5
NCBP2P52298 STK32C-202ENST00000368619 733 ntTSL 216.04■□□□□ 0.168e-11■■□□□ 14.5
NCBP2P52298 MAP4K4-211ENST00000427603 526 ntTSL 48.91□□□□□ -0.983e-6■■□□□ 14.5
NCBP2P52298 LIMK2-206ENST00000462625 1042 ntTSL 221.35■■□□□ 1.012e-6■■□□□ 14.5
NCBP2P52298 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.31□□□□□ -0.122e-6■■□□□ 14.5
NCBP2P52298 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.092e-6■■□□□ 14.5
NCBP2P52298 PALB2-205ENST00000567003 789 ntTSL 313.83□□□□□ -0.23e-6■■□□□ 14.4
NCBP2P52298 PALB2-206ENST00000568219 3963 ntTSL 1 (best) BASIC10.33□□□□□ -0.763e-6■■□□□ 14.4
NCBP2P52298 PALB2-201ENST00000261584 4003 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.863e-6■■□□□ 14.4
NCBP2P52298 CHD9-204ENST00000561869 720 ntTSL 21.3□□□□□ -2.23e-9■■□□□ 14.4
NCBP2P52298 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.33□□□□□ -1.245e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-216ENST00000580888 710 ntTSL 216.69■□□□□ 0.265e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.17■□□□□ 0.185e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-208ENST00000578476 573 ntTSL 215.5■□□□□ 0.075e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.025e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-214ENST00000580461 909 ntTSL 212□□□□□ -0.495e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-213ENST00000579139 568 ntTSL 411.08□□□□□ -0.645e-7■■□□□ 14.4
NCBP2P52298 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC10.75□□□□□ -0.695e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-218ENST00000581544 1444 ntTSL 210.7□□□□□ -0.75e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-236ENST00000584901 1021 ntTSL 210.64□□□□□ -0.715e-7■■□□□ 14.4
NCBP2P52298 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.795e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC10.1□□□□□ -0.795e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-226ENST00000582848 591 ntTSL 310.09□□□□□ -0.795e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-223ENST00000582169 552 ntTSL 410.07□□□□□ -0.85e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-229ENST00000583802 563 ntTSL 410.07□□□□□ -0.85e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-231ENST00000584054 716 ntTSL 29.27□□□□□ -0.935e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-215ENST00000580886 562 ntTSL 29.27□□□□□ -0.935e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-233ENST00000584784 818 ntTSL 59.08□□□□□ -0.965e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-232ENST00000584712 782 ntTSL 29.03□□□□□ -0.965e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-209ENST00000578495 916 ntTSL 58.02□□□□□ -1.135e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-212ENST00000579085 569 ntTSL 47.8□□□□□ -1.165e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-237ENST00000585024 577 ntTSL 47.66□□□□□ -1.185e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-202ENST00000396527 1169 ntTSL 27.32□□□□□ -1.245e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-230ENST00000583899 665 ntTSL 35.69□□□□□ -1.55e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-211ENST00000578754 547 ntTSL 45.02□□□□□ -1.615e-7■■□□□ 14.4
NCBP2P52298 EIF4A1-224ENST00000582213 560 ntTSL 43.41□□□□□ -1.865e-7■■□□□ 14.4
NCBP2P52298 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.65■■□□□ 1.222e-9■■□□□ 14.4
NCBP2P52298 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.432e-9■■□□□ 14.4
NCBP2P52298 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.382e-9■■□□□ 14.4
NCBP2P52298 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.132e-9■■□□□ 14.4
NCBP2P52298 DDX42-212ENST00000581135 589 ntTSL 415.16■□□□□ 0.022e-9■■□□□ 14.4
NCBP2P52298 AKT1-212ENST00000555380 534 ntTSL 410.88□□□□□ -0.671e-6■■□□□ 14.4
NCBP2P52298 IPO4-204ENST00000558193 555 ntTSL 417.64■□□□□ 0.412e-10■■□□□ 14.4
NCBP2P52298 IPO4-208ENST00000559253 579 ntTSL 414.98□□□□□ -0.012e-10■■□□□ 14.4
NCBP2P52298 IPO4-212ENST00000560222 573 ntTSL 314.28□□□□□ -0.122e-10■■□□□ 14.4
NCBP2P52298 IPO4-202ENST00000557996 530 ntTSL 414.25□□□□□ -0.132e-10■■□□□ 14.4
NCBP2P52298 IPO4-216ENST00000561034 535 ntTSL 412.86□□□□□ -0.352e-10■■□□□ 14.4
NCBP2P52298 IPO4-206ENST00000558718 554 ntTSL 212.11□□□□□ -0.472e-10■■□□□ 14.4
NCBP2P52298 IPO4-213ENST00000560315 558 ntTSL 212.11□□□□□ -0.472e-10■■□□□ 14.4
NCBP2P52298 IPO4-218ENST00000561199 3249 ntTSL 211.35□□□□□ -0.592e-10■■□□□ 14.4
NCBP2P52298 IPO4-203ENST00000558046 3440 ntTSL 211.34□□□□□ -0.592e-10■■□□□ 14.4
NCBP2P52298 IPO4-207ENST00000558780 3540 ntTSL 211.28□□□□□ -0.62e-10■■□□□ 14.4
NCBP2P52298 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.632e-10■■□□□ 14.4
NCBP2P52298 IPO4-211ENST00000560155 3485 ntTSL 1 (best)11.09□□□□□ -0.632e-10■■□□□ 14.4
NCBP2P52298 IPO4-214ENST00000560798 3581 ntTSL 211.08□□□□□ -0.642e-10■■□□□ 14.4
NCBP2P52298 IPO4-217ENST00000561090 3632 ntTSL 210.63□□□□□ -0.712e-10■■□□□ 14.4
NCBP2P52298 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.782e-10■■□□□ 14.4
NCBP2P52298 IPO4-209ENST00000559588 3537 ntTSL 1 (best)9.75□□□□□ -0.852e-10■■□□□ 14.4
NCBP2P52298 IPO4-221ENST00000625289 297 ntTSL 5 BASIC8.39□□□□□ -1.072e-10■■□□□ 14.4
NCBP2P52298 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.077e-10■■□□□ 14.3
NCBP2P52298 MAPK3-207ENST00000466521 1878 ntTSL 528■■■□□ 2.077e-10■■□□□ 14.3
NCBP2P52298 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.83■■■□□ 2.057e-10■■□□□ 14.3
NCBP2P52298 MAPK3-214ENST00000490298 1718 ntTSL 525.2■■□□□ 1.637e-10■■□□□ 14.3
NCBP2P52298 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.197e-10■■□□□ 14.3
NCBP2P52298 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.5■■□□□ 1.197e-10■■□□□ 14.3
Retrieved 100 of 18,329 protein–RNA pairs in 179.8 ms