RNA–Protein interactions for RNA: ENST00000538594.5

AP003108.2-205, humanhuman

TSL 4

Gene AP003108.2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-205ENST00000538594 NISCHQ9Y2I1 1504 aa20.47■□□□□ 0.87
AP003108.2-205ENST00000538594 CCDC180Q9P1Z9 1646 aa18.38■□□□□ 0.53
AP003108.2-205ENST00000538594 ABCC9O60706 1549 aa18.03■□□□□ 0.48
AP003108.2-205ENST00000538594 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
AP003108.2-205ENST00000538594 DCAF8L2P0C7V8 631 aa17.31■□□□□ 0.36
AP003108.2-205ENST00000538594 NACADO15069 1562 aa17.24■□□□□ 0.35
AP003108.2-205ENST00000538594 ZCCHC6Q5VYS8 1495 aaKnown RBP17.04■□□□□ 0.32
AP003108.2-205ENST00000538594 MYO15BQ96JP2 1530 aa17■□□□□ 0.31
AP003108.2-205ENST00000538594 UNC13AQ9UPW8 1703 aa16.96■□□□□ 0.3
AP003108.2-205ENST00000538594 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
AP003108.2-205ENST00000538594 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
AP003108.2-205ENST00000538594 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
AP003108.2-205ENST00000538594 BICRAQ9NZM4 1560 aa16.67■□□□□ 0.26
AP003108.2-205ENST00000538594 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
AP003108.2-205ENST00000538594 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
AP003108.2-205ENST00000538594 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
AP003108.2-205ENST00000538594 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
AP003108.2-205ENST00000538594 CC2D2AQ9P2K1 1620 aa16.31■□□□□ 0.2
AP003108.2-205ENST00000538594 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
AP003108.2-205ENST00000538594 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
AP003108.2-205ENST00000538594 BAZ1AQ9NRL2 1556 aaPredicted RBP15.96■□□□□ 0.15
AP003108.2-205ENST00000538594 CHIC1Q5VXU3 224 aa15.93■□□□□ 0.14
AP003108.2-205ENST00000538594 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
AP003108.2-205ENST00000538594 ATAD2BQ9ULI0 1458 aa15.83■□□□□ 0.12
AP003108.2-205ENST00000538594 BAZ1BQ9UIG0 1483 aaKnown RBP15.82■□□□□ 0.12
AP003108.2-205ENST00000538594 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
AP003108.2-205ENST00000538594 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
AP003108.2-205ENST00000538594 MROH2BQ7Z745 1585 aa15.76■□□□□ 0.11
AP003108.2-205ENST00000538594 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
AP003108.2-205ENST00000538594 WIZO95785 1651 aa15.68■□□□□ 0.1
AP003108.2-205ENST00000538594 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
AP003108.2-205ENST00000538594 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
AP003108.2-205ENST00000538594 NESP48681 1621 aa15.51■□□□□ 0.07
AP003108.2-205ENST00000538594 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
AP003108.2-205ENST00000538594 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
AP003108.2-205ENST00000538594 KIF21AQ7Z4S6 1674 aa15.46■□□□□ 0.07
AP003108.2-205ENST00000538594 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
AP003108.2-205ENST00000538594 CUX2O14529 1486 aa15.42■□□□□ 0.06
AP003108.2-205ENST00000538594 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
AP003108.2-205ENST00000538594 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
AP003108.2-205ENST00000538594 THOC2Q8NI27 1593 aaKnown RBP15.36■□□□□ 0.05
AP003108.2-205ENST00000538594 CEP164Q9UPV0 1460 aa15.32■□□□□ 0.04
AP003108.2-205ENST00000538594 MRC2Q9UBG0 1479 aa15.27■□□□□ 0.04
AP003108.2-205ENST00000538594 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.03
AP003108.2-205ENST00000538594 CFTRP13569 1480 aa15.25■□□□□ 0.03
AP003108.2-205ENST00000538594 CCDC88BA6NC98 1476 aa15.24■□□□□ 0.03
AP003108.2-205ENST00000538594 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
AP003108.2-205ENST00000538594 WDR62O43379 1518 aa15.2■□□□□ 0.02
AP003108.2-205ENST00000538594 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
AP003108.2-205ENST00000538594 ABCC8Q09428 1581 aa15.03■□□□□ -0
AP003108.2-205ENST00000538594 DNMBPQ6XZF7 1577 aa15.02□□□□□ -0.01
AP003108.2-205ENST00000538594 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
AP003108.2-205ENST00000538594 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
AP003108.2-205ENST00000538594 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
AP003108.2-205ENST00000538594 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
AP003108.2-205ENST00000538594 POLA1P09884 1462 aaPredicted RBP14.85□□□□□ -0.03
AP003108.2-205ENST00000538594 FGD5Q6ZNL6 1462 aa14.83□□□□□ -0.03
AP003108.2-205ENST00000538594 CUX1P39880 1505 aa14.82□□□□□ -0.04
AP003108.2-205ENST00000538594 ZNF608Q9ULD9 1512 aaPredicted RBP14.82□□□□□ -0.04
AP003108.2-205ENST00000538594 TARBP1Q13395 1621 aaKnown RBP14.82□□□□□ -0.04
AP003108.2-205ENST00000538594 SOGA1O94964 1423 aa14.8□□□□□ -0.04
AP003108.2-205ENST00000538594 WDR97A6NE52 1622 aa14.78□□□□□ -0.04
AP003108.2-205ENST00000538594 RAD54L2Q9Y4B4 1467 aa14.77□□□□□ -0.04
AP003108.2-205ENST00000538594 CHD1O14646 1710 aa14.76□□□□□ -0.05
AP003108.2-205ENST00000538594 PBRM1Q86U86 1689 aa14.75□□□□□ -0.05
AP003108.2-205ENST00000538594 AQRO60306 1485 aaKnown RBP eCLIP14.75□□□□□ -0.055e-6■■□□□ 14.3
AP003108.2-205ENST00000538594 FBLN2P98095 1184 aa14.74□□□□□ -0.05
AP003108.2-205ENST00000538594 OSCARQ8IYS5 282 aa14.74□□□□□ -0.05
AP003108.2-205ENST00000538594 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
AP003108.2-205ENST00000538594 WRNQ14191 1432 aaPredicted RBP eCLIP14.73□□□□□ -0.05
AP003108.2-205ENST00000538594 TOP2BQ02880 1626 aa14.71□□□□□ -0.05
AP003108.2-205ENST00000538594 TDRD9Q8NDG6 1382 aaKnown RBP14.71□□□□□ -0.06
AP003108.2-205ENST00000538594 SYNJ1O43426 1573 aa14.69□□□□□ -0.06
AP003108.2-205ENST00000538594 SNAPC4Q5SXM2 1469 aa14.68□□□□□ -0.06
AP003108.2-205ENST00000538594 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
AP003108.2-205ENST00000538594 GAPVD1Q14C86 1478 aa14.65□□□□□ -0.06
AP003108.2-205ENST00000538594 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
AP003108.2-205ENST00000538594 ABCA5Q8WWZ7 1642 aa14.64□□□□□ -0.07
AP003108.2-205ENST00000538594 ABCA10Q8WWZ4 1543 aa14.64□□□□□ -0.07
AP003108.2-205ENST00000538594 CHMP7Q8WUX9 453 aaPredicted RBP14.62□□□□□ -0.07
AP003108.2-205ENST00000538594 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
AP003108.2-205ENST00000538594 RIMBP3CA6NJZ7 1639 aa14.58□□□□□ -0.08
AP003108.2-205ENST00000538594 RIMBP3BA6NNM3 1639 aa14.58□□□□□ -0.08
AP003108.2-205ENST00000538594 RIMBP3Q9UFD9 1639 aa14.58□□□□□ -0.08
AP003108.2-205ENST00000538594 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
AP003108.2-205ENST00000538594 ADAMTS12P58397 1594 aa14.54□□□□□ -0.08
AP003108.2-205ENST00000538594 ARHGEF11O15085 1522 aa14.52□□□□□ -0.08
AP003108.2-205ENST00000538594 ERICH3Q5RHP9 1530 aa14.51□□□□□ -0.09
AP003108.2-205ENST00000538594 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
AP003108.2-205ENST00000538594 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.09
AP003108.2-205ENST00000538594 FHAD1B1AJZ9 1412 aa14.46□□□□□ -0.09
AP003108.2-205ENST00000538594 KIF27Q86VH2 1401 aa14.46□□□□□ -0.09
AP003108.2-205ENST00000538594 CUL7Q14999 1698 aa14.46□□□□□ -0.1
AP003108.2-205ENST00000538594 CEP170Q5SW79 1584 aa14.4□□□□□ -0.1
AP003108.2-205ENST00000538594 CYB5RLQ6IPT4 315 aa14.4□□□□□ -0.1
AP003108.2-205ENST00000538594 ARAP1Q96P48 1450 aa14.36□□□□□ -0.11
AP003108.2-205ENST00000538594 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
AP003108.2-205ENST00000538594 NUP160Q12769 1436 aa14.32□□□□□ -0.12
AP003108.2-205ENST00000538594 SHROOM2Q13796 1616 aa14.3□□□□□ -0.12
AP003108.2-205ENST00000538594 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms