RNA–Protein interactions for RNA: ENST00000543044.2

AP003108.2-208, humanhuman

TSL 3 BASIC

Gene AP003108.2, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-208ENST00000543044 NISCHQ9Y2I1 1504 aa22.38■■□□□ 1.17
AP003108.2-208ENST00000543044 ABCC9O60706 1549 aa20.09■□□□□ 0.81
AP003108.2-208ENST00000543044 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
AP003108.2-208ENST00000543044 RB1CC1Q8TDY2 1594 aa19.12■□□□□ 0.65
AP003108.2-208ENST00000543044 NACADO15069 1562 aa19.01■□□□□ 0.63
AP003108.2-208ENST00000543044 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
AP003108.2-208ENST00000543044 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
AP003108.2-208ENST00000543044 MYO15BQ96JP2 1530 aa18.77■□□□□ 0.6
AP003108.2-208ENST00000543044 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
AP003108.2-208ENST00000543044 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
AP003108.2-208ENST00000543044 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
AP003108.2-208ENST00000543044 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
AP003108.2-208ENST00000543044 DCAF1Q9Y4B6 1507 aa18.5■□□□□ 0.55
AP003108.2-208ENST00000543044 SHROOM4Q9ULL8 1493 aa18.36■□□□□ 0.53
AP003108.2-208ENST00000543044 SCRIBQ14160 1630 aa18.26■□□□□ 0.51
AP003108.2-208ENST00000543044 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
AP003108.2-208ENST00000543044 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
AP003108.2-208ENST00000543044 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
AP003108.2-208ENST00000543044 NCAPD3P42695 1498 aa17.57■□□□□ 0.4
AP003108.2-208ENST00000543044 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
AP003108.2-208ENST00000543044 SMARCA2P51531 1590 aa17.44■□□□□ 0.38
AP003108.2-208ENST00000543044 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
AP003108.2-208ENST00000543044 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
AP003108.2-208ENST00000543044 DNAJC5Q9H3Z4 198 aa17.39■□□□□ 0.37
AP003108.2-208ENST00000543044 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
AP003108.2-208ENST00000543044 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
AP003108.2-208ENST00000543044 CUX2O14529 1486 aa17.36■□□□□ 0.37
AP003108.2-208ENST00000543044 BAZ1BQ9UIG0 1483 aaKnown RBP17.31■□□□□ 0.36
AP003108.2-208ENST00000543044 PEG3Q9GZU2 1588 aa17.29■□□□□ 0.36
AP003108.2-208ENST00000543044 NESP48681 1621 aa17.25■□□□□ 0.35
AP003108.2-208ENST00000543044 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
AP003108.2-208ENST00000543044 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
AP003108.2-208ENST00000543044 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.32
AP003108.2-208ENST00000543044 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
AP003108.2-208ENST00000543044 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
AP003108.2-208ENST00000543044 WIZO95785 1651 aa16.99■□□□□ 0.31
AP003108.2-208ENST00000543044 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
AP003108.2-208ENST00000543044 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
AP003108.2-208ENST00000543044 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.29
AP003108.2-208ENST00000543044 WDR62O43379 1518 aa16.86■□□□□ 0.29
AP003108.2-208ENST00000543044 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
AP003108.2-208ENST00000543044 CFTRP13569 1480 aa16.83■□□□□ 0.28
AP003108.2-208ENST00000543044 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
AP003108.2-208ENST00000543044 TOP2AP11388 1531 aaKnown RBP16.81■□□□□ 0.28
AP003108.2-208ENST00000543044 URB2Q14146 1524 aaKnown RBP16.67■□□□□ 0.26
AP003108.2-208ENST00000543044 CCDC88BA6NC98 1476 aa16.64■□□□□ 0.25
AP003108.2-208ENST00000543044 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
AP003108.2-208ENST00000543044 TRIM41Q8WV44 630 aa16.58■□□□□ 0.24
AP003108.2-208ENST00000543044 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
AP003108.2-208ENST00000543044 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
AP003108.2-208ENST00000543044 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
AP003108.2-208ENST00000543044 ABCC8Q09428 1581 aa16.48■□□□□ 0.23
AP003108.2-208ENST00000543044 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
AP003108.2-208ENST00000543044 DNMBPQ6XZF7 1577 aa16.42■□□□□ 0.22
AP003108.2-208ENST00000543044 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
AP003108.2-208ENST00000543044 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.25e-6■■□□□ 14.3
AP003108.2-208ENST00000543044 POLA1P09884 1462 aaPredicted RBP16.33■□□□□ 0.2
AP003108.2-208ENST00000543044 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.2
AP003108.2-208ENST00000543044 RIMBP3CA6NJZ7 1639 aa16.3■□□□□ 0.2
AP003108.2-208ENST00000543044 RIMBP3BA6NNM3 1639 aa16.3■□□□□ 0.2
AP003108.2-208ENST00000543044 RIMBP3Q9UFD9 1639 aa16.3■□□□□ 0.2
AP003108.2-208ENST00000543044 SOGA1O94964 1423 aa16.28■□□□□ 0.2
AP003108.2-208ENST00000543044 ARHGEF11O15085 1522 aa16.27■□□□□ 0.2
AP003108.2-208ENST00000543044 RAD54L2Q9Y4B4 1467 aa16.26■□□□□ 0.19
AP003108.2-208ENST00000543044 FBLN2P98095 1184 aa16.24■□□□□ 0.19
AP003108.2-208ENST00000543044 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
AP003108.2-208ENST00000543044 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
AP003108.2-208ENST00000543044 CUX1P39880 1505 aa16.19■□□□□ 0.18
AP003108.2-208ENST00000543044 CHD1O14646 1710 aa16.19■□□□□ 0.18
AP003108.2-208ENST00000543044 WDR97A6NE52 1622 aa16.19■□□□□ 0.18
AP003108.2-208ENST00000543044 CYB5RLQ6IPT4 315 aa16.18■□□□□ 0.18
AP003108.2-208ENST00000543044 SNAPC4Q5SXM2 1469 aa16.15■□□□□ 0.18
AP003108.2-208ENST00000543044 SUPT5HO00267 1087 aaKnown RBP16.13■□□□□ 0.17
AP003108.2-208ENST00000543044 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
AP003108.2-208ENST00000543044 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
AP003108.2-208ENST00000543044 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
AP003108.2-208ENST00000543044 ARAP1Q96P48 1450 aa16.11■□□□□ 0.17
AP003108.2-208ENST00000543044 SYNJ2O15056 1496 aa16.07■□□□□ 0.16
AP003108.2-208ENST00000543044 CLASP1Q7Z460 1538 aa16.06■□□□□ 0.16
AP003108.2-208ENST00000543044 GAPVD1Q14C86 1478 aa16.06■□□□□ 0.16
AP003108.2-208ENST00000543044 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
AP003108.2-208ENST00000543044 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
AP003108.2-208ENST00000543044 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
AP003108.2-208ENST00000543044 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.15
AP003108.2-208ENST00000543044 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
AP003108.2-208ENST00000543044 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
AP003108.2-208ENST00000543044 TOP2BQ02880 1626 aa15.92■□□□□ 0.14
AP003108.2-208ENST00000543044 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
AP003108.2-208ENST00000543044 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
AP003108.2-208ENST00000543044 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
AP003108.2-208ENST00000543044 ADAMTS12P58397 1594 aa15.87■□□□□ 0.13
AP003108.2-208ENST00000543044 NUP160Q12769 1436 aa15.86■□□□□ 0.13
AP003108.2-208ENST00000543044 ERICH3Q5RHP9 1530 aa15.84■□□□□ 0.13
AP003108.2-208ENST00000543044 CEP170Q5SW79 1584 aa15.83■□□□□ 0.12
AP003108.2-208ENST00000543044 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
AP003108.2-208ENST00000543044 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
AP003108.2-208ENST00000543044 JPH4Q96JJ6 628 aa15.73■□□□□ 0.11
AP003108.2-208ENST00000543044 PRG4Q92954 1404 aaPredicted RBP15.71■□□□□ 0.11
AP003108.2-208ENST00000543044 IGF1RP08069 1367 aa15.66■□□□□ 0.1
AP003108.2-208ENST00000543044 KIF27Q86VH2 1401 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms