RNA–Protein interactions for RNA: ENST00000558718.5

IPO4-206, Transcript of importin 4, humanhuman

TSL 2

Gene IPO4, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-206ENST00000558718 NISCHQ9Y2I1 1504 aa31.69■■■□□ 2.66
IPO4-206ENST00000558718 CCDC180Q9P1Z9 1646 aa28.19■■■□□ 2.1
IPO4-206ENST00000558718 ABCC9O60706 1549 aa27.48■■□□□ 1.99
IPO4-206ENST00000558718 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
IPO4-206ENST00000558718 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
IPO4-206ENST00000558718 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
IPO4-206ENST00000558718 NACADO15069 1562 aa26.42■■□□□ 1.82
IPO4-206ENST00000558718 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
IPO4-206ENST00000558718 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
IPO4-206ENST00000558718 UNC13AQ9UPW8 1703 aa26■■□□□ 1.75
IPO4-206ENST00000558718 SCRIBQ14160 1630 aa25.76■■□□□ 1.71
IPO4-206ENST00000558718 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.712e-6■□□□□ 9.6
IPO4-206ENST00000558718 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
IPO4-206ENST00000558718 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
IPO4-206ENST00000558718 DNAJC5BQ9UF47 199 aa25.22■■□□□ 1.63
IPO4-206ENST00000558718 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
IPO4-206ENST00000558718 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
IPO4-206ENST00000558718 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.55
IPO4-206ENST00000558718 SMARCA4P51532 1647 aa24.62■■□□□ 1.53
IPO4-206ENST00000558718 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
IPO4-206ENST00000558718 MROH2BQ7Z745 1585 aa24.45■■□□□ 1.5
IPO4-206ENST00000558718 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
IPO4-206ENST00000558718 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
IPO4-206ENST00000558718 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
IPO4-206ENST00000558718 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.48
IPO4-206ENST00000558718 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
IPO4-206ENST00000558718 WIZO95785 1651 aa24.24■■□□□ 1.47
IPO4-206ENST00000558718 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
IPO4-206ENST00000558718 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
IPO4-206ENST00000558718 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
IPO4-206ENST00000558718 NESP48681 1621 aa23.82■■□□□ 1.4
IPO4-206ENST00000558718 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
IPO4-206ENST00000558718 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
IPO4-206ENST00000558718 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
IPO4-206ENST00000558718 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
IPO4-206ENST00000558718 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.37
IPO4-206ENST00000558718 KIF21AQ7Z4S6 1674 aa23.61■■□□□ 1.37
IPO4-206ENST00000558718 CFTRP13569 1480 aa23.54■■□□□ 1.36
IPO4-206ENST00000558718 PDS5BQ9NTI5 1447 aa23.53■■□□□ 1.36
IPO4-206ENST00000558718 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
IPO4-206ENST00000558718 THOC2Q8NI27 1593 aaKnown RBP23.46■■□□□ 1.35
IPO4-206ENST00000558718 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
IPO4-206ENST00000558718 CEP164Q9UPV0 1460 aa23.37■■□□□ 1.33
IPO4-206ENST00000558718 CUX2O14529 1486 aa23.36■■□□□ 1.33
IPO4-206ENST00000558718 MRC2Q9UBG0 1479 aa23.32■■□□□ 1.32
IPO4-206ENST00000558718 WDR62O43379 1518 aa23.26■■□□□ 1.31
IPO4-206ENST00000558718 URB2Q14146 1524 aaKnown RBP23.19■■□□□ 1.3
IPO4-206ENST00000558718 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
IPO4-206ENST00000558718 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
IPO4-206ENST00000558718 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
IPO4-206ENST00000558718 CUX1P39880 1505 aa22.93■■□□□ 1.26
IPO4-206ENST00000558718 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
IPO4-206ENST00000558718 IFT140Q96RY7 1462 aa22.86■■□□□ 1.25
IPO4-206ENST00000558718 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
IPO4-206ENST00000558718 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
IPO4-206ENST00000558718 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
IPO4-206ENST00000558718 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
IPO4-206ENST00000558718 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
IPO4-206ENST00000558718 SYNJ1O43426 1573 aa22.79■■□□□ 1.24
IPO4-206ENST00000558718 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
IPO4-206ENST00000558718 TOP2BQ02880 1626 aa22.76■■□□□ 1.23
IPO4-206ENST00000558718 SOGA1O94964 1423 aa22.75■■□□□ 1.23
IPO4-206ENST00000558718 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
IPO4-206ENST00000558718 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
IPO4-206ENST00000558718 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.224e-6■■■■□ 26.7
IPO4-206ENST00000558718 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
IPO4-206ENST00000558718 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
IPO4-206ENST00000558718 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
IPO4-206ENST00000558718 PBRM1Q86U86 1689 aa22.56■■□□□ 1.2
IPO4-206ENST00000558718 ABCA5Q8WWZ7 1642 aa22.55■■□□□ 1.2
IPO4-206ENST00000558718 CHD1O14646 1710 aa22.51■■□□□ 1.19
IPO4-206ENST00000558718 GAPVD1Q14C86 1478 aa22.5■■□□□ 1.19
IPO4-206ENST00000558718 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
IPO4-206ENST00000558718 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
IPO4-206ENST00000558718 OSCARQ8IYS5 282 aa22.42■■□□□ 1.18
IPO4-206ENST00000558718 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
IPO4-206ENST00000558718 FBLN2P98095 1184 aa22.4■■□□□ 1.18
IPO4-206ENST00000558718 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
IPO4-206ENST00000558718 ADAMTS12P58397 1594 aa22.33■■□□□ 1.16
IPO4-206ENST00000558718 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
IPO4-206ENST00000558718 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
IPO4-206ENST00000558718 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
IPO4-206ENST00000558718 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
IPO4-206ENST00000558718 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
IPO4-206ENST00000558718 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
IPO4-206ENST00000558718 CUL7Q14999 1698 aa22.19■■□□□ 1.14
IPO4-206ENST00000558718 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
IPO4-206ENST00000558718 RUSC2Q8N2Y8 1516 aa22.17■■□□□ 1.14
IPO4-206ENST00000558718 IGF1RP08069 1367 aa22.17■■□□□ 1.14
IPO4-206ENST00000558718 CEP170Q5SW79 1584 aa22.13■■□□□ 1.13
IPO4-206ENST00000558718 RIMBP3CA6NJZ7 1639 aa22.11■■□□□ 1.13
IPO4-206ENST00000558718 RIMBP3BA6NNM3 1639 aa22.11■■□□□ 1.13
IPO4-206ENST00000558718 RIMBP3Q9UFD9 1639 aa22.11■■□□□ 1.13
IPO4-206ENST00000558718 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
IPO4-206ENST00000558718 NUP160Q12769 1436 aa22.08■■□□□ 1.13
IPO4-206ENST00000558718 ARHGEF11O15085 1522 aa22.07■■□□□ 1.12
IPO4-206ENST00000558718 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
IPO4-206ENST00000558718 SHROOM2Q13796 1616 aa21.96■■□□□ 1.11
IPO4-206ENST00000558718 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
IPO4-206ENST00000558718 ERCC6L2Q5T890 1561 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms