RNA–Protein interactions for RNA: ENST00000560222.1

IPO4-212, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-212ENST00000560222 NISCHQ9Y2I1 1504 aa41.15■■■■■ 4.18
IPO4-212ENST00000560222 ABCC9O60706 1549 aa38.05■■■■□ 3.68
IPO4-212ENST00000560222 CCDC180Q9P1Z9 1646 aa37.1■■■■□ 3.53
IPO4-212ENST00000560222 DNAJC5BQ9UF47 199 aa36.35■■■■□ 3.41
IPO4-212ENST00000560222 RB1CC1Q8TDY2 1594 aa35.78■■■■□ 3.32
IPO4-212ENST00000560222 DCAF8L2P0C7V8 631 aa35.47■■■■□ 3.27
IPO4-212ENST00000560222 PABPN1Q86U42 306 aaKnown RBP eCLIP35.44■■■■□ 3.262e-6■□□□□ 9.6
IPO4-212ENST00000560222 NACADO15069 1562 aa35.34■■■■□ 3.25
IPO4-212ENST00000560222 UNC13AQ9UPW8 1703 aa34.84■■■■□ 3.17
IPO4-212ENST00000560222 BICRAQ9NZM4 1560 aa34.69■■■■□ 3.14
IPO4-212ENST00000560222 MYO15BQ96JP2 1530 aa34.51■■■■□ 3.12
IPO4-212ENST00000560222 CECR2Q9BXF3 1484 aa34.32■■■■□ 3.08
IPO4-212ENST00000560222 CC2D2AQ9P2K1 1620 aa34.22■■■■□ 3.07
IPO4-212ENST00000560222 SHROOM4Q9ULL8 1493 aa34.09■■■■□ 3.05
IPO4-212ENST00000560222 EIF4G1Q04637 1599 aaKnown RBP33.95■■■■□ 3.03
IPO4-212ENST00000560222 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
IPO4-212ENST00000560222 DNAJC5Q9H3Z4 198 aa33.9■■■■□ 3.02
IPO4-212ENST00000560222 ZCCHC6Q5VYS8 1495 aaKnown RBP33.89■■■■□ 3.02
IPO4-212ENST00000560222 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
IPO4-212ENST00000560222 CUX2O14529 1486 aa32.96■■■□□ 2.87
IPO4-212ENST00000560222 ERCC6Q03468 1493 aa32.94■■■□□ 2.86
IPO4-212ENST00000560222 NCAPD3P42695 1498 aa32.67■■■□□ 2.82
IPO4-212ENST00000560222 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
IPO4-212ENST00000560222 NESP48681 1621 aa32.44■■■□□ 2.78
IPO4-212ENST00000560222 SMARCA2P51531 1590 aa32.33■■■□□ 2.77
IPO4-212ENST00000560222 TRIM41Q8WV44 630 aa32.29■■■□□ 2.76
IPO4-212ENST00000560222 HMGXB3Q12766 1538 aa32.27■■■□□ 2.76
IPO4-212ENST00000560222 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
IPO4-212ENST00000560222 BAZ1BQ9UIG0 1483 aaKnown RBP32.17■■■□□ 2.74
IPO4-212ENST00000560222 THOC2Q8NI27 1593 aaKnown RBP32.09■■■□□ 2.73
IPO4-212ENST00000560222 LAMC3Q9Y6N6 1575 aa32■■■□□ 2.71
IPO4-212ENST00000560222 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
IPO4-212ENST00000560222 PDS5BQ9NTI5 1447 aa31.97■■■□□ 2.71
IPO4-212ENST00000560222 KIF21AQ7Z4S6 1674 aa31.89■■■□□ 2.7
IPO4-212ENST00000560222 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
IPO4-212ENST00000560222 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
IPO4-212ENST00000560222 CADPSQ9ULU8 1353 aa31.71■■■□□ 2.67
IPO4-212ENST00000560222 MRC2Q9UBG0 1479 aa31.67■■■□□ 2.66
IPO4-212ENST00000560222 OSCARQ8IYS5 282 aa31.56■■■□□ 2.64
IPO4-212ENST00000560222 WDR62O43379 1518 aa31.54■■■□□ 2.64
IPO4-212ENST00000560222 CEP164Q9UPV0 1460 aa31.43■■■□□ 2.62
IPO4-212ENST00000560222 FANCD2Q9BXW9 1451 aa31.34■■■□□ 2.61
IPO4-212ENST00000560222 WIZO95785 1651 aa31.3■■■□□ 2.6
IPO4-212ENST00000560222 CFTRP13569 1480 aa31.13■■■□□ 2.57
IPO4-212ENST00000560222 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
IPO4-212ENST00000560222 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
IPO4-212ENST00000560222 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
IPO4-212ENST00000560222 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
IPO4-212ENST00000560222 CYB5RLQ6IPT4 315 aa30.93■■■□□ 2.54
IPO4-212ENST00000560222 TRHP20396 242 aaPredicted RBP30.88■■■□□ 2.53
IPO4-212ENST00000560222 ARHGEF11O15085 1522 aa30.87■■■□□ 2.53
IPO4-212ENST00000560222 ZNF608Q9ULD9 1512 aaPredicted RBP30.86■■■□□ 2.53
IPO4-212ENST00000560222 RSF1Q96T23 1441 aaPredicted RBP30.84■■■□□ 2.53
IPO4-212ENST00000560222 TOP2AP11388 1531 aaKnown RBP30.82■■■□□ 2.52
IPO4-212ENST00000560222 IFT140Q96RY7 1462 aa30.82■■■□□ 2.52
IPO4-212ENST00000560222 FBLN2P98095 1184 aa30.7■■■□□ 2.51
IPO4-212ENST00000560222 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
IPO4-212ENST00000560222 PRDM2Q13029 1718 aa30.6■■■□□ 2.49
IPO4-212ENST00000560222 CCDC88BA6NC98 1476 aa30.57■■■□□ 2.48
IPO4-212ENST00000560222 EIF4G3O43432 1585 aaKnown RBP30.56■■■□□ 2.48
IPO4-212ENST00000560222 AQRO60306 1485 aaKnown RBP eCLIP30.56■■■□□ 2.484e-6■■■■□ 26.7
IPO4-212ENST00000560222 ABCC8Q09428 1581 aa30.53■■■□□ 2.48
IPO4-212ENST00000560222 AEBP2Q6ZN18 517 aaPredicted RBP30.52■■■□□ 2.48
IPO4-212ENST00000560222 ARAP1Q96P48 1450 aa30.51■■■□□ 2.48
IPO4-212ENST00000560222 CHD1O14646 1710 aa30.47■■■□□ 2.47
IPO4-212ENST00000560222 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
IPO4-212ENST00000560222 TARBP1Q13395 1621 aaKnown RBP30.34■■■□□ 2.45
IPO4-212ENST00000560222 TDRD9Q8NDG6 1382 aaKnown RBP30.3■■■□□ 2.44
IPO4-212ENST00000560222 CHMP7Q8WUX9 453 aaPredicted RBP30.28■■■□□ 2.44
IPO4-212ENST00000560222 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
IPO4-212ENST00000560222 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
IPO4-212ENST00000560222 SOGA1O94964 1423 aa30.23■■■□□ 2.43
IPO4-212ENST00000560222 SNAPC4Q5SXM2 1469 aa30.16■■■□□ 2.42
IPO4-212ENST00000560222 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
IPO4-212ENST00000560222 CLASP1Q7Z460 1538 aa30.07■■■□□ 2.4
IPO4-212ENST00000560222 FGD5Q6ZNL6 1462 aa30.01■■■□□ 2.4
IPO4-212ENST00000560222 MAGI1Q96QZ7 1491 aaPredicted RBP30■■■□□ 2.39
IPO4-212ENST00000560222 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
IPO4-212ENST00000560222 SYNJ2O15056 1496 aa29.94■■■□□ 2.38
IPO4-212ENST00000560222 GAPVD1Q14C86 1478 aa29.94■■■□□ 2.38
IPO4-212ENST00000560222 WDR97A6NE52 1622 aa29.92■■■□□ 2.38
IPO4-212ENST00000560222 CUX1P39880 1505 aa29.83■■■□□ 2.37
IPO4-212ENST00000560222 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
IPO4-212ENST00000560222 ERCC6L2Q5T890 1561 aa29.64■■■□□ 2.33
IPO4-212ENST00000560222 ABCA10Q8WWZ4 1543 aa29.58■■■□□ 2.33
IPO4-212ENST00000560222 GRIN2AQ12879 1464 aa29.57■■■□□ 2.32
IPO4-212ENST00000560222 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
IPO4-212ENST00000560222 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
IPO4-212ENST00000560222 NUP160Q12769 1436 aa29.45■■■□□ 2.31
IPO4-212ENST00000560222 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.3
IPO4-212ENST00000560222 FAM69CQ0P6D2 419 aa29.41■■■□□ 2.3
IPO4-212ENST00000560222 NPM1P06748 294 aaKnown RBP eCLIP29.4■■■□□ 2.3
IPO4-212ENST00000560222 ADAMTS12P58397 1594 aa29.39■■■□□ 2.29
IPO4-212ENST00000560222 FHAD1B1AJZ9 1412 aa29.38■■■□□ 2.29
IPO4-212ENST00000560222 PRG4Q92954 1404 aaPredicted RBP29.37■■■□□ 2.29
IPO4-212ENST00000560222 JPH4Q96JJ6 628 aa29.35■■■□□ 2.29
IPO4-212ENST00000560222 KIF13AQ9H1H9 1805 aa29.34■■■□□ 2.29
IPO4-212ENST00000560222 SHROOM2Q13796 1616 aa29.33■■■□□ 2.29
IPO4-212ENST00000560222 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
IPO4-212ENST00000560222 ABCC10Q5T3U5 1492 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms