Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 ATXN2-204ENST00000392645 2842 ntTSL 215.31■□□□□ 0.041e-6■■□□□ 12.2
DKC1O60832 ARHGEF1-222ENST00000600517 428 ntTSL 315.13■□□□□ 0.011e-6■■□□□ 12.2
DKC1O60832 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.041e-6■■□□□ 12.2
DKC1O60832 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.071e-6■■□□□ 12.2
DKC1O60832 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC14.58□□□□□ -0.081e-6■■□□□ 12.2
DKC1O60832 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.121e-6■■□□□ 12.2
DKC1O60832 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.171e-6■■□□□ 12.2
DKC1O60832 ARHGEF1-216ENST00000598587 359 ntTSL 213.59□□□□□ -0.231e-6■■□□□ 12.2
DKC1O60832 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.261e-6■■□□□ 12.2
DKC1O60832 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.261e-6■■□□□ 12.2
DKC1O60832 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.261e-6■■□□□ 12.2
DKC1O60832 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.311e-6■■□□□ 12.2
DKC1O60832 ATXN2-210ENST00000483311 4159 ntTSL 1 (best)12.99□□□□□ -0.331e-6■■□□□ 12.2
DKC1O60832 ARHGEF1-220ENST00000600274 3439 ntTSL 1 (best)12.34□□□□□ -0.431e-6■■□□□ 12.2
DKC1O60832 STAT3-211ENST00000585517 3319 ntTSL 5 BASIC12.27□□□□□ -0.441e-6■■□□□ 12.2
DKC1O60832 PDE4D-206ENST00000405053 512 ntTSL 512.11□□□□□ -0.471e-6■■□□□ 12.2
DKC1O60832 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.671e-6■■□□□ 12.2
DKC1O60832 PDE4D-201ENST00000309641 2025 ntTSL 1 (best)10.14□□□□□ -0.791e-6■■□□□ 12.2
DKC1O60832 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC9.69□□□□□ -0.861e-6■■□□□ 12.2
DKC1O60832 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.891e-6■■□□□ 12.2
DKC1O60832 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.97□□□□□ -0.971e-6■■□□□ 12.2
DKC1O60832 G2E3-208ENST00000549553 587 ntTSL 28.65□□□□□ -1.021e-6■■□□□ 12.2
DKC1O60832 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.111e-6■■□□□ 12.2
DKC1O60832 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.341e-6■■□□□ 12.2
DKC1O60832 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.361e-6■■□□□ 12.2
DKC1O60832 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.411e-6■■□□□ 12.2
DKC1O60832 ATXN2-217ENST00000548492 556 ntTSL 45.68□□□□□ -1.51e-6■■□□□ 12.2
DKC1O60832 PDE4D-221ENST00000514231 733 ntTSL 33.62□□□□□ -1.831e-6■■□□□ 12.2
DKC1O60832 PDE4D-220ENST00000512069 536 ntTSL 23.58□□□□□ -1.841e-6■■□□□ 12.2
DKC1O60832 G2E3-211ENST00000552515 367 ntTSL 33.37□□□□□ -1.871e-6■■□□□ 12.2
DKC1O60832 SNORD12C-201ENST00000386307 89 ntBASIC0.35□□□□□ -2.351e-323■■□□□ 12.1
DKC1O60832 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.25■■□□□ 1.633e-6■■□□□ 12
DKC1O60832 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.477e-20■■□□□ 12
DKC1O60832 PCGF3-204ENST00000427463 582 ntTSL 323.55■■□□□ 1.363e-6■■□□□ 12
DKC1O60832 PCGF3-210ENST00000482726 538 ntTSL 423.55■■□□□ 1.363e-6■■□□□ 12
DKC1O60832 SLC39A14-209ENST00000520644 377 ntTSL 522.35■■□□□ 1.177e-20■■□□□ 12
DKC1O60832 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.073e-6■■□□□ 12
DKC1O60832 PCGF3-209ENST00000475288 604 ntTSL 320■□□□□ 0.793e-6■■□□□ 12
DKC1O60832 SLC39A14-212ENST00000524285 570 ntTSL 419.93■□□□□ 0.787e-20■■□□□ 12
DKC1O60832 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.693e-6■■□□□ 12
DKC1O60832 PCGF3-203ENST00000419774 589 ntTSL 518.89■□□□□ 0.613e-6■■□□□ 12
DKC1O60832 PCGF3-211ENST00000484141 566 ntTSL 218.62■□□□□ 0.573e-6■■□□□ 12
DKC1O60832 PCGF3-205ENST00000430644 2621 ntTSL 217.97■□□□□ 0.473e-6■■□□□ 12
DKC1O60832 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.167e-20■■□□□ 12
DKC1O60832 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.277e-20■■□□□ 12
DKC1O60832 PCGF3-207ENST00000440452 3609 ntTSL 212.99□□□□□ -0.333e-6■■□□□ 12
DKC1O60832 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.377e-20■■□□□ 12
DKC1O60832 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.851e-323■■□□□ 12
DKC1O60832 SNORD94-201ENST00000386037 137 ntBASIC7.55□□□□□ -1.21e-323■■□□□ 12
DKC1O60832 PTCD3-216ENST00000487043 1054 ntTSL 34.19□□□□□ -1.741e-323■■□□□ 12
DKC1O60832 SLCO5A1-204ENST00000526750 2650 ntTSL 522.78■■□□□ 1.245e-11■■□□□ 12
DKC1O60832 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.38■□□□□ 0.535e-11■■□□□ 12
DKC1O60832 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.345e-11■■□□□ 12
DKC1O60832 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.95■□□□□ 0.35e-11■■□□□ 12
DKC1O60832 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.756e-12■■□□□ 11.9
DKC1O60832 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.3■■□□□ 1.326e-12■■□□□ 11.9
DKC1O60832 PDIA6-206ENST00000489662 564 ntTSL 414.48□□□□□ -0.096e-12■■□□□ 11.9
DKC1O60832 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC13.25□□□□□ -0.296e-12■■□□□ 11.9
DKC1O60832 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC12.61□□□□□ -0.396e-12■■□□□ 11.9
DKC1O60832 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC10.86□□□□□ -0.676e-12■■□□□ 11.9
DKC1O60832 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC10.63□□□□□ -0.716e-12■■□□□ 11.9
DKC1O60832 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.835e-7■■□□□ 11.8
DKC1O60832 EPS8-214ENST00000544064 577 ntTSL 423.92■■□□□ 1.424e-8■■□□□ 11.8
DKC1O60832 RPA1-202ENST00000570451 630 ntTSL 323.58■■□□□ 1.374e-8■■□□□ 11.8
DKC1O60832 EPS8-205ENST00000536793 559 ntTSL 420.7■□□□□ 0.94e-8■■□□□ 11.8
DKC1O60832 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.834e-8■■□□□ 11.8
DKC1O60832 RPA1-203ENST00000571058 577 ntTSL 419.43■□□□□ 0.74e-8■■□□□ 11.8
DKC1O60832 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.34■□□□□ 0.694e-8■■□□□ 11.8
DKC1O60832 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.64e-8■■□□□ 11.8
DKC1O60832 EPS8-206ENST00000536956 621 ntTSL 318.59■□□□□ 0.574e-8■■□□□ 11.8
DKC1O60832 DAPK1-206ENST00000469067 2499 ntTSL 217.99■□□□□ 0.474e-8■■□□□ 11.8
DKC1O60832 DAPK1-217ENST00000496522 579 ntTSL 217.8■□□□□ 0.444e-8■■□□□ 11.8
DKC1O60832 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.44e-8■■□□□ 11.8
DKC1O60832 DAPK1-210ENST00000472344 548 ntTSL 516.43■□□□□ 0.224e-8■■□□□ 11.8
DKC1O60832 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.014e-23■■□□□ 11.8
DKC1O60832 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.044e-23■■□□□ 11.8
DKC1O60832 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.184e-8■■□□□ 11.8
DKC1O60832 EPS8-211ENST00000543468 3722 ntTSL 1 (best)13.37□□□□□ -0.274e-8■■□□□ 11.8
DKC1O60832 DAPK1-219ENST00000622514 5772 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.314e-8■■□□□ 11.8
DKC1O60832 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC12.95□□□□□ -0.344e-8■■□□□ 11.8
DKC1O60832 EPS8-212ENST00000543523 3925 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.374e-8■■□□□ 11.8
DKC1O60832 DAPK1-209ENST00000472284 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.454e-8■■□□□ 11.8
DKC1O60832 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.644e-8■■□□□ 11.8
DKC1O60832 DAPK1-212ENST00000489291 4334 ntTSL 1 (best)10.52□□□□□ -0.724e-8■■□□□ 11.8
DKC1O60832 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.814e-8■■□□□ 11.8
DKC1O60832 LAMP2-204ENST00000486593 1069 ntTSL 59.5□□□□□ -0.894e-23■■□□□ 11.8
DKC1O60832 TTL-202ENST00000460450 4148 ntTSL 29.38□□□□□ -0.914e-8■■□□□ 11.8
DKC1O60832 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.994e-23■■□□□ 11.8
DKC1O60832 ASAP1-212ENST00000521426 566 ntTSL 48.06□□□□□ -1.122e-6■■□□□ 11.8
DKC1O60832 RFX7-203ENST00000560792 518 ntAPPRIS ALT2 TSL 46.8□□□□□ -1.324e-8■■□□□ 11.8
DKC1O60832 EPS8-204ENST00000535752 543 ntTSL 44.86□□□□□ -1.634e-8■■□□□ 11.8
DKC1O60832 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.684e-8■■□□□ 11.8
DKC1O60832 EPS8-210ENST00000543363 374 ntTSL 43.08□□□□□ -1.924e-8■■□□□ 11.8
DKC1O60832 RPA1-204ENST00000571725 413 ntTSL 53.01□□□□□ -1.934e-8■■□□□ 11.8
DKC1O60832 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.9□□□□□ -1.954e-8■■□□□ 11.8
DKC1O60832 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.83□□□□□ -2.124e-8■■□□□ 11.8
DKC1O60832 SNORD82-201ENST00000365530 70 ntBASIC4.23□□□□□ -1.731e-323■■□□□ 11.8
DKC1O60832 NCL-210ENST00000494618 910 ntTSL 24.1□□□□□ -1.751e-323■■□□□ 11.8
DKC1O60832 TGFBR3-208ENST00000529608 785 ntTSL 59.43□□□□□ -0.92e-6■■□□□ 11.7
DKC1O60832 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.69■□□□□ 0.581e-323■■□□□ 11.6
Retrieved 100 of 8,567 protein–RNA pairs in 59.5 ms