RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
ARHGEF1-222ENST00000600517 CCDC180Q9P1Z9 1646 aa29.21■■■□□ 2.27
ARHGEF1-222ENST00000600517 ABCC9O60706 1549 aa28.77■■■□□ 2.2
ARHGEF1-222ENST00000600517 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
ARHGEF1-222ENST00000600517 DCAF8L2P0C7V8 631 aa27.58■■■□□ 2.01
ARHGEF1-222ENST00000600517 NACADO15069 1562 aa27.56■■■□□ 2
ARHGEF1-222ENST00000600517 MYO15BQ96JP2 1530 aa27.38■■□□□ 1.97
ARHGEF1-222ENST00000600517 ZCCHC6Q5VYS8 1495 aaKnown RBP27.34■■□□□ 1.97
ARHGEF1-222ENST00000600517 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
ARHGEF1-222ENST00000600517 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.94e-7■■■□□ 16.7
ARHGEF1-222ENST00000600517 UNC13AQ9UPW8 1703 aa26.86■■□□□ 1.89
ARHGEF1-222ENST00000600517 BICRAQ9NZM4 1560 aa26.78■■□□□ 1.88
ARHGEF1-222ENST00000600517 SCRIBQ14160 1630 aa26.64■■□□□ 1.85
ARHGEF1-222ENST00000600517 DNAJC5BQ9UF47 199 aa26.61■■□□□ 1.85
ARHGEF1-222ENST00000600517 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
ARHGEF1-222ENST00000600517 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
ARHGEF1-222ENST00000600517 CC2D2AQ9P2K1 1620 aa25.99■■□□□ 1.75
ARHGEF1-222ENST00000600517 CECR2Q9BXF3 1484 aa25.88■■□□□ 1.73
ARHGEF1-222ENST00000600517 SMARCA4P51532 1647 aa25.49■■□□□ 1.67
ARHGEF1-222ENST00000600517 NCAPD3P42695 1498 aa25.48■■□□□ 1.67
ARHGEF1-222ENST00000600517 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
ARHGEF1-222ENST00000600517 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
ARHGEF1-222ENST00000600517 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
ARHGEF1-222ENST00000600517 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
ARHGEF1-222ENST00000600517 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
ARHGEF1-222ENST00000600517 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
ARHGEF1-222ENST00000600517 BAZ1BQ9UIG0 1483 aaKnown RBP25.2■■□□□ 1.62
ARHGEF1-222ENST00000600517 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
ARHGEF1-222ENST00000600517 WIZO95785 1651 aa25.01■■□□□ 1.59
ARHGEF1-222ENST00000600517 NESP48681 1621 aa24.86■■□□□ 1.57
ARHGEF1-222ENST00000600517 ERCC6Q03468 1493 aa24.79■■□□□ 1.56
ARHGEF1-222ENST00000600517 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
ARHGEF1-222ENST00000600517 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
ARHGEF1-222ENST00000600517 CADPSQ9ULU8 1353 aa24.74■■□□□ 1.55
ARHGEF1-222ENST00000600517 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
ARHGEF1-222ENST00000600517 CUX2O14529 1486 aa24.59■■□□□ 1.53
ARHGEF1-222ENST00000600517 CFTRP13569 1480 aa24.54■■□□□ 1.52
ARHGEF1-222ENST00000600517 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
ARHGEF1-222ENST00000600517 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
ARHGEF1-222ENST00000600517 THOC2Q8NI27 1593 aaKnown RBP24.45■■□□□ 1.5
ARHGEF1-222ENST00000600517 FANCD2Q9BXW9 1451 aa24.4■■□□□ 1.5
ARHGEF1-222ENST00000600517 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
ARHGEF1-222ENST00000600517 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
ARHGEF1-222ENST00000600517 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
ARHGEF1-222ENST00000600517 WDR62O43379 1518 aa24.28■■□□□ 1.48
ARHGEF1-222ENST00000600517 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
ARHGEF1-222ENST00000600517 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
ARHGEF1-222ENST00000600517 DNAJC5Q9H3Z4 198 aa24.08■■□□□ 1.45
ARHGEF1-222ENST00000600517 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
ARHGEF1-222ENST00000600517 TOPBP1Q92547 1522 aa24■■□□□ 1.43
ARHGEF1-222ENST00000600517 DNMBPQ6XZF7 1577 aa23.93■■□□□ 1.42
ARHGEF1-222ENST00000600517 IFT140Q96RY7 1462 aa23.89■■□□□ 1.42
ARHGEF1-222ENST00000600517 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
ARHGEF1-222ENST00000600517 POLA1P09884 1462 aaPredicted RBP23.79■■□□□ 1.4
ARHGEF1-222ENST00000600517 CUX1P39880 1505 aa23.76■■□□□ 1.39
ARHGEF1-222ENST00000600517 SOGA1O94964 1423 aa23.73■■□□□ 1.39
ARHGEF1-222ENST00000600517 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
ARHGEF1-222ENST00000600517 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
ARHGEF1-222ENST00000600517 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
ARHGEF1-222ENST00000600517 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.382e-11■■■■■ 48.4
ARHGEF1-222ENST00000600517 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
ARHGEF1-222ENST00000600517 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
ARHGEF1-222ENST00000600517 TDRD9Q8NDG6 1382 aaKnown RBP23.62■■□□□ 1.37
ARHGEF1-222ENST00000600517 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
ARHGEF1-222ENST00000600517 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
ARHGEF1-222ENST00000600517 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
ARHGEF1-222ENST00000600517 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
ARHGEF1-222ENST00000600517 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
ARHGEF1-222ENST00000600517 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
ARHGEF1-222ENST00000600517 GRIN2BQ13224 1484 aa23.44■■□□□ 1.34
ARHGEF1-222ENST00000600517 FBLN2P98095 1184 aa23.42■■□□□ 1.34
ARHGEF1-222ENST00000600517 GAPVD1Q14C86 1478 aa23.42■■□□□ 1.34
ARHGEF1-222ENST00000600517 SNAPC4Q5SXM2 1469 aa23.39■■□□□ 1.34
ARHGEF1-222ENST00000600517 MAGI1Q96QZ7 1491 aaPredicted RBP23.37■■□□□ 1.33
ARHGEF1-222ENST00000600517 ABCA5Q8WWZ7 1642 aa23.35■■□□□ 1.33
ARHGEF1-222ENST00000600517 CHMP7Q8WUX9 453 aaPredicted RBP23.35■■□□□ 1.33
ARHGEF1-222ENST00000600517 CHD1O14646 1710 aa23.3■■□□□ 1.32
ARHGEF1-222ENST00000600517 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
ARHGEF1-222ENST00000600517 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
ARHGEF1-222ENST00000600517 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
ARHGEF1-222ENST00000600517 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
ARHGEF1-222ENST00000600517 ARHGEF11O15085 1522 aa23.16■■□□□ 1.3
ARHGEF1-222ENST00000600517 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
ARHGEF1-222ENST00000600517 RIMBP3CA6NJZ7 1639 aa23.14■■□□□ 1.29
ARHGEF1-222ENST00000600517 RIMBP3BA6NNM3 1639 aa23.14■■□□□ 1.29
ARHGEF1-222ENST00000600517 RIMBP3Q9UFD9 1639 aa23.14■■□□□ 1.29
ARHGEF1-222ENST00000600517 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
ARHGEF1-222ENST00000600517 GRIN2AQ12879 1464 aa23.12■■□□□ 1.29
ARHGEF1-222ENST00000600517 ADAMTS12P58397 1594 aa23.12■■□□□ 1.29
ARHGEF1-222ENST00000600517 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
ARHGEF1-222ENST00000600517 IGF1RP08069 1367 aa23.08■■□□□ 1.29
ARHGEF1-222ENST00000600517 NUP160Q12769 1436 aa23.04■■□□□ 1.28
ARHGEF1-222ENST00000600517 CYB5RLQ6IPT4 315 aa23.02■■□□□ 1.28
ARHGEF1-222ENST00000600517 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
ARHGEF1-222ENST00000600517 ARAP1Q96P48 1450 aa22.97■■□□□ 1.27
ARHGEF1-222ENST00000600517 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
ARHGEF1-222ENST00000600517 CUL7Q14999 1698 aa22.9■■□□□ 1.26
ARHGEF1-222ENST00000600517 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
ARHGEF1-222ENST00000600517 JPH4Q96JJ6 628 aa22.86■■□□□ 1.25
ARHGEF1-222ENST00000600517 SHROOM2Q13796 1616 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms