RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 AEBP2Q6ZN18 517 aaPredicted RBP31.35■■■□□ 2.61
PDE4D-209ENST00000502575 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
PDE4D-209ENST00000502575 SENP3Q9H4L4 574 aaPredicted RBP26.92■■□□□ 1.9
PDE4D-209ENST00000502575 PHF23Q9BUL5 403 aaPredicted RBP26.49■■□□□ 1.83
PDE4D-209ENST00000502575 FOXD1Q16676 465 aa24.88■■□□□ 1.57
PDE4D-209ENST00000502575 PLPPR3Q6T4P5 718 aa24.36■■□□□ 1.49
PDE4D-209ENST00000502575 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
PDE4D-209ENST00000502575 PIAS4Q8N2W9 510 aaPredicted RBP23.38■■□□□ 1.33
PDE4D-209ENST00000502575 MSH5O43196 834 aa23.37■■□□□ 1.33
PDE4D-209ENST00000502575 ADRA2BP18089 450 aa23.37■■□□□ 1.33
PDE4D-209ENST00000502575 POTEDQ86YR6 584 aa22.1■■□□□ 1.13
PDE4D-209ENST00000502575 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
PDE4D-209ENST00000502575 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
PDE4D-209ENST00000502575 DMRT2Q9Y5R5 561 aa21.35■■□□□ 1.01
PDE4D-209ENST00000502575 MAPK8IP2Q13387 824 aaPredicted RBP21.33■■□□□ 1.01
PDE4D-209ENST00000502575 PPP4R3CPQ6ZMV5 832 aa21.29■■□□□ 1
PDE4D-209ENST00000502575 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
PDE4D-209ENST00000502575 NCBP3Q53F19 620 aaKnown RBP20.72■□□□□ 0.91
PDE4D-209ENST00000502575 HOXD11P31277 338 aaPredicted RBP20.71■□□□□ 0.91
PDE4D-209ENST00000502575 RNF216Q9NWF9 866 aaPredicted RBP20.66■□□□□ 0.9
PDE4D-209ENST00000502575 DCAF8L1A6NGE4 600 aa20.34■□□□□ 0.85
PDE4D-209ENST00000502575 NPM3O75607 178 aaKnown RBP20.25■□□□□ 0.83
PDE4D-209ENST00000502575 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
PDE4D-209ENST00000502575 KCNA4P22459 653 aa20.08■□□□□ 0.81
PDE4D-209ENST00000502575 RNF39Q9H2S5 420 aa19.87■□□□□ 0.77
PDE4D-209ENST00000502575 CACNB1Q02641 598 aaPredicted RBP19.74■□□□□ 0.75
PDE4D-209ENST00000502575 C1QBPQ07021 282 aaKnown RBP19.7■□□□□ 0.74
PDE4D-209ENST00000502575 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
PDE4D-209ENST00000502575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.68■□□□□ 0.74
PDE4D-209ENST00000502575 ABCC9O60706 1549 aa19.46■□□□□ 0.71
PDE4D-209ENST00000502575 U3KPZ7 1027 aaPredicted RBP19.26■□□□□ 0.67
PDE4D-209ENST00000502575 SLC4A2P04920 1241 aa19.22■□□□□ 0.67
PDE4D-209ENST00000502575 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
PDE4D-209ENST00000502575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
PDE4D-209ENST00000502575 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
PDE4D-209ENST00000502575 APLP2Q06481 763 aa19.03■□□□□ 0.64
PDE4D-209ENST00000502575 SAMD1Q6SPF0 538 aaPredicted RBP18.9■□□□□ 0.62
PDE4D-209ENST00000502575 CAPN15O75808 1086 aa18.85■□□□□ 0.61
PDE4D-209ENST00000502575 MYCNP04198 464 aaPredicted RBP18.84■□□□□ 0.61
PDE4D-209ENST00000502575 SPINK5Q9NQ38 1064 aaPredicted RBP18.81■□□□□ 0.6
PDE4D-209ENST00000502575 FOXD4L1Q9NU39 408 aa18.78■□□□□ 0.6
PDE4D-209ENST00000502575 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
PDE4D-209ENST00000502575 DSG3P32926 999 aa18.69■□□□□ 0.58
PDE4D-209ENST00000502575 TRHP20396 242 aaPredicted RBP18.59■□□□□ 0.57
PDE4D-209ENST00000502575 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
PDE4D-209ENST00000502575 UNC13AQ9UPW8 1703 aa18.46■□□□□ 0.55
PDE4D-209ENST00000502575 NACADO15069 1562 aa18.46■□□□□ 0.55
PDE4D-209ENST00000502575 ZBTB22O15209 634 aa18.4■□□□□ 0.54
PDE4D-209ENST00000502575 ABCB7O75027 752 aa18.35■□□□□ 0.53
PDE4D-209ENST00000502575 ATXN8OSP0DMR3 200 aa18.28■□□□□ 0.52
PDE4D-209ENST00000502575 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.52
PDE4D-209ENST00000502575 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
PDE4D-209ENST00000502575 POLA2Q14181 598 aa18.18■□□□□ 0.5
PDE4D-209ENST00000502575 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
PDE4D-209ENST00000502575 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.49
PDE4D-209ENST00000502575 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
PDE4D-209ENST00000502575 ZBTB12Q9Y330 459 aaPredicted RBP18.07■□□□□ 0.48
PDE4D-209ENST00000502575 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
PDE4D-209ENST00000502575 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
PDE4D-209ENST00000502575 RBM42Q9BTD8 480 aaKnown RBP17.99■□□□□ 0.47
PDE4D-209ENST00000502575 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
PDE4D-209ENST00000502575 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
PDE4D-209ENST00000502575 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
PDE4D-209ENST00000502575 SHROOM4Q9ULL8 1493 aa17.73■□□□□ 0.43
PDE4D-209ENST00000502575 FBLN2P98095 1184 aa17.66■□□□□ 0.42
PDE4D-209ENST00000502575 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
PDE4D-209ENST00000502575 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
PDE4D-209ENST00000502575 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
PDE4D-209ENST00000502575 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
PDE4D-209ENST00000502575 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
PDE4D-209ENST00000502575 SPDYE2BA6NHP3 402 aa17.45■□□□□ 0.38
PDE4D-209ENST00000502575 SPDYE6P0CI01 402 aa17.45■□□□□ 0.38
PDE4D-209ENST00000502575 SPDYE2Q495Y8 402 aa17.45■□□□□ 0.38
PDE4D-209ENST00000502575 POTEHQ6S545 545 aa17.43■□□□□ 0.38
PDE4D-209ENST00000502575 MKRN4PQ13434 485 aaPredicted RBP17.39■□□□□ 0.37
PDE4D-209ENST00000502575 CHRDL2Q6WN34 429 aa17.33■□□□□ 0.36
PDE4D-209ENST00000502575 REM2Q8IYK8 340 aaPredicted RBP17.32■□□□□ 0.36
PDE4D-209ENST00000502575 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
PDE4D-209ENST00000502575 SSUH2Q9Y2M2 353 aa17.2■□□□□ 0.34
PDE4D-209ENST00000502575 SMARCA4P51532 1647 aa17.12■□□□□ 0.33
PDE4D-209ENST00000502575 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
PDE4D-209ENST00000502575 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
PDE4D-209ENST00000502575 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
PDE4D-209ENST00000502575 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
PDE4D-209ENST00000502575 SMARCA2P51531 1590 aa16.97■□□□□ 0.31
PDE4D-209ENST00000502575 BAZ1AQ9NRL2 1556 aaPredicted RBP16.96■□□□□ 0.31
PDE4D-209ENST00000502575 HMGXB3Q12766 1538 aa16.96■□□□□ 0.3
PDE4D-209ENST00000502575 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDE4D-209ENST00000502575 PIP4P2Q8N4L2 257 aa16.95■□□□□ 0.3
PDE4D-209ENST00000502575 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
PDE4D-209ENST00000502575 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.29
PDE4D-209ENST00000502575 CLEC11AQ9Y240 323 aa16.88■□□□□ 0.29
PDE4D-209ENST00000502575 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
PDE4D-209ENST00000502575 SPDYE4A6NLX3 237 aa16.82■□□□□ 0.28
PDE4D-209ENST00000502575 NESP48681 1621 aa16.79■□□□□ 0.28
PDE4D-209ENST00000502575 WIZO95785 1651 aa16.78■□□□□ 0.28
PDE4D-209ENST00000502575 KIF21AQ7Z4S6 1674 aa16.74■□□□□ 0.27
PDE4D-209ENST00000502575 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
PDE4D-209ENST00000502575 PRR29P0C7W0 189 aa16.72■□□□□ 0.27
PDE4D-209ENST00000502575 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms