RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 AEBP2Q6ZN18 517 aaPredicted RBP32.09■■■□□ 2.73
PDE4D-221ENST00000514231 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
PDE4D-221ENST00000514231 PHF23Q9BUL5 403 aaPredicted RBP27.32■■□□□ 1.96
PDE4D-221ENST00000514231 SENP3Q9H4L4 574 aaPredicted RBP27.32■■□□□ 1.96
PDE4D-221ENST00000514231 FOXD1Q16676 465 aa25.36■■□□□ 1.65
PDE4D-221ENST00000514231 PLPPR3Q6T4P5 718 aa25.16■■□□□ 1.62
PDE4D-221ENST00000514231 PPP6R1Q9UPN7 881 aa24.2■■□□□ 1.46
PDE4D-221ENST00000514231 ADRA2BP18089 450 aa24.14■■□□□ 1.45
PDE4D-221ENST00000514231 PIAS4Q8N2W9 510 aaPredicted RBP23.83■■□□□ 1.41
PDE4D-221ENST00000514231 MSH5O43196 834 aa23.53■■□□□ 1.36
PDE4D-221ENST00000514231 POTEDQ86YR6 584 aa22.7■■□□□ 1.22
PDE4D-221ENST00000514231 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
PDE4D-221ENST00000514231 PPP4R3CPQ6ZMV5 832 aa22.12■■□□□ 1.13
PDE4D-221ENST00000514231 MAPK8IP2Q13387 824 aaPredicted RBP21.99■■□□□ 1.11
PDE4D-221ENST00000514231 DMRT2Q9Y5R5 561 aa21.76■■□□□ 1.07
PDE4D-221ENST00000514231 CNKSR2Q8WXI2 1034 aa21.58■■□□□ 1.05
PDE4D-221ENST00000514231 NCBP3Q53F19 620 aaKnown RBP21.49■■□□□ 1.03
PDE4D-221ENST00000514231 KCNA4P22459 653 aa21.25■□□□□ 0.99
PDE4D-221ENST00000514231 RNF216Q9NWF9 866 aaPredicted RBP21.24■□□□□ 0.99
PDE4D-221ENST00000514231 HOXD11P31277 338 aaPredicted RBP21.22■□□□□ 0.99
PDE4D-221ENST00000514231 NPM3O75607 178 aaKnown RBP21.13■□□□□ 0.97
PDE4D-221ENST00000514231 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
PDE4D-221ENST00000514231 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
PDE4D-221ENST00000514231 SLC4A1APQ9BWU0 796 aaKnown RBP20.2■□□□□ 0.82
PDE4D-221ENST00000514231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDE4D-221ENST00000514231 RNF39Q9H2S5 420 aa20.13■□□□□ 0.81
PDE4D-221ENST00000514231 SLC4A2P04920 1241 aa20.02■□□□□ 0.8
PDE4D-221ENST00000514231 C1QBPQ07021 282 aaKnown RBP19.9■□□□□ 0.78
PDE4D-221ENST00000514231 U3KPZ7 1027 aaPredicted RBP19.82■□□□□ 0.76
PDE4D-221ENST00000514231 CACNB1Q02641 598 aaPredicted RBP19.79■□□□□ 0.76
PDE4D-221ENST00000514231 FOXD4L1Q9NU39 408 aa19.66■□□□□ 0.74
PDE4D-221ENST00000514231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
PDE4D-221ENST00000514231 MYCNP04198 464 aaPredicted RBP19.54■□□□□ 0.72
PDE4D-221ENST00000514231 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
PDE4D-221ENST00000514231 ZBTB22O15209 634 aa19.53■□□□□ 0.72
PDE4D-221ENST00000514231 SAMD1Q6SPF0 538 aaPredicted RBP19.44■□□□□ 0.7
PDE4D-221ENST00000514231 APLP2Q06481 763 aa19.4■□□□□ 0.7
PDE4D-221ENST00000514231 SPINK5Q9NQ38 1064 aaPredicted RBP19.33■□□□□ 0.68
PDE4D-221ENST00000514231 CAPN15O75808 1086 aa19.28■□□□□ 0.68
PDE4D-221ENST00000514231 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
PDE4D-221ENST00000514231 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
PDE4D-221ENST00000514231 ZNF219Q9P2Y4 722 aaPredicted RBP19.14■□□□□ 0.65
PDE4D-221ENST00000514231 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
PDE4D-221ENST00000514231 ATXN8OSP0DMR3 200 aa19.07■□□□□ 0.64
PDE4D-221ENST00000514231 DSG3P32926 999 aa19.05■□□□□ 0.64
PDE4D-221ENST00000514231 ATF5Q9Y2D1 282 aaPredicted RBP19.01■□□□□ 0.63
PDE4D-221ENST00000514231 ABCB7O75027 752 aa18.85■□□□□ 0.61
PDE4D-221ENST00000514231 POLA2Q14181 598 aa18.78■□□□□ 0.6
PDE4D-221ENST00000514231 ZBTB12Q9Y330 459 aaPredicted RBP18.47■□□□□ 0.55
PDE4D-221ENST00000514231 FBLN2P98095 1184 aa18.27■□□□□ 0.52
PDE4D-221ENST00000514231 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
PDE4D-221ENST00000514231 MKRN4PQ13434 485 aaPredicted RBP18.17■□□□□ 0.5
PDE4D-221ENST00000514231 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
PDE4D-221ENST00000514231 SPDYE2BA6NHP3 402 aa17.94■□□□□ 0.46
PDE4D-221ENST00000514231 SPDYE6P0CI01 402 aa17.94■□□□□ 0.46
PDE4D-221ENST00000514231 SPDYE2Q495Y8 402 aa17.94■□□□□ 0.46
PDE4D-221ENST00000514231 AKT1S1Q96B36 256 aa17.9■□□□□ 0.46
PDE4D-221ENST00000514231 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
PDE4D-221ENST00000514231 SSUH2Q9Y2M2 353 aa17.76■□□□□ 0.43
PDE4D-221ENST00000514231 POTEHQ6S545 545 aa17.73■□□□□ 0.43
PDE4D-221ENST00000514231 REM2Q8IYK8 340 aaPredicted RBP17.71■□□□□ 0.43
PDE4D-221ENST00000514231 SPDYE4A6NLX3 237 aa17.65■□□□□ 0.42
PDE4D-221ENST00000514231 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
PDE4D-221ENST00000514231 CHRDL2Q6WN34 429 aa17.51■□□□□ 0.39
PDE4D-221ENST00000514231 PITPNM1O00562 1244 aa17.48■□□□□ 0.39
PDE4D-221ENST00000514231 SPDYE1Q8NFV5 336 aaPredicted RBP17.47■□□□□ 0.39
PDE4D-221ENST00000514231 FKBP8Q14318 412 aa17.37■□□□□ 0.37
PDE4D-221ENST00000514231 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
PDE4D-221ENST00000514231 PROM2Q8N271 834 aa17.35■□□□□ 0.37
PDE4D-221ENST00000514231 STAG3Q9UJ98 1225 aa17.27■□□□□ 0.36
PDE4D-221ENST00000514231 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
PDE4D-221ENST00000514231 PIP4P2Q8N4L2 257 aa17.23■□□□□ 0.35
PDE4D-221ENST00000514231 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
PDE4D-221ENST00000514231 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
PDE4D-221ENST00000514231 CHADLQ6NUI6 762 aa16.96■□□□□ 0.31
PDE4D-221ENST00000514231 CREBZFQ9NS37 354 aa16.92■□□□□ 0.3
PDE4D-221ENST00000514231 FBXO3Q9UK99 471 aa16.91■□□□□ 0.3
PDE4D-221ENST00000514231 FARP1Q9Y4F1 1045 aaPredicted RBP16.82■□□□□ 0.28
PDE4D-221ENST00000514231 MIER1Q8N108 512 aa16.79■□□□□ 0.28
PDE4D-221ENST00000514231 HAX1O00165 279 aa16.75■□□□□ 0.27
PDE4D-221ENST00000514231 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
PDE4D-221ENST00000514231 MNX1P50219 401 aaPredicted RBP16.72■□□□□ 0.27
PDE4D-221ENST00000514231 PLCD3Q8N3E9 789 aa16.7■□□□□ 0.26
PDE4D-221ENST00000514231 C19orf67A6NJJ6 358 aa16.67■□□□□ 0.26
PDE4D-221ENST00000514231 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDE4D-221ENST00000514231 VASPP50552 380 aaPredicted RBP16.62■□□□□ 0.25
PDE4D-221ENST00000514231 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
PDE4D-221ENST00000514231 EVX2Q03828 476 aa16.57■□□□□ 0.24
PDE4D-221ENST00000514231 CD44P16070 742 aaKnown RBP16.54■□□□□ 0.24
PDE4D-221ENST00000514231 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
PDE4D-221ENST00000514231 PAK3O75914 559 aaPredicted RBP16.43■□□□□ 0.22
PDE4D-221ENST00000514231 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
PDE4D-221ENST00000514231 ZRANB1Q9UGI0 708 aa16.41■□□□□ 0.22
PDE4D-221ENST00000514231 IFNLR1Q8IU57 520 aaPredicted RBP16.4■□□□□ 0.22
PDE4D-221ENST00000514231 NUBP1P53384 320 aa16.38■□□□□ 0.21
PDE4D-221ENST00000514231 RASEFQ8IZ41 740 aa16.34■□□□□ 0.21
PDE4D-221ENST00000514231 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
PDE4D-221ENST00000514231 CLCN6P51797 869 aa16.32■□□□□ 0.2
PDE4D-221ENST00000514231 TSPYL2Q9H2G4 693 aaPredicted RBP16.32■□□□□ 0.2
PDE4D-221ENST00000514231 GABBR2O75899 941 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms